NUPL1 33212

Name: NUPL1	Sequence: fasta or formatted (587aa)		NCBI GI: 56788377
Description: nucleoporin like 1 isoform b		Referenced in: Nucleus and Nucleolus
Other entries for this name: alt prot [599aa] nucleoporin like 1 isoform a
Composition: Amino acid Percentage Count Longest homopolymer A alanine 10.1 59 3 C cysteine 0.3 2 1 D aspartate 2.0 12 1 E glutamate 3.4 20 2 F phenylalanine 5.5 32 1 G glycine 13.3 78 2 H histidine 0.7 4 1 I isoleucine 2.7 16 1 K lysine 4.9 29 2 L leucine 9.4 55 2 M methionine 1.4 8 1 N asparagine 4.8 28 2 P proline 4.9 29 2 Q glutamine 6.1 36 4 R arginine 2.0 12 2 S serine 11.4 67 4 T threonine 12.6 74 4 V valine 3.2 19 1 W tryptophan 0.2 1 1 Y tyrosine 1.0 6 1			Comparative genomics: Search single species RefSeq proteins at NCBI H. sapiens M. musculus D. rerio C. intestinalis S. purpuratus D. melanogaster C. elegans A. thaliana S. cerevisiae E. coli W3110 A. pernix K1 Search summary Figure data Additional searches of RefSeq proteins at NCBI All Eukaryotes Bacteria Archaea Viruses Primates Mammals Vertebrates
Related human proteins: Protein Relative score Description Self-match 1.000 nucleoporin like 1 isoform b NUPL1 0.992 nucleoporin like 1 isoform a NUP62 0.044 nucleoporin 62kDa NUP62 0.044 nucleoporin 62kDa NUP62 0.044 nucleoporin 62kDa NUP62 0.044 nucleoporin 62kDa TRO 0.037 trophinin isoform 5 POM121 0.033 nuclear pore membrane protein 121 LOC100288540 0.032 PREDICTED: hypothetical protein XP_002342775 MUC21 0.032 mucin 21 NUP98 0.031 nucleoporin 98kD isoform 4 NUP98 0.031 nucleoporin 98kD isoform 3 NUP98 0.031 nucleoporin 98kD isoform 1 NUP98 0.031 nucleoporin 98kD isoform 2 NUP214 0.030 nucleoporin 214kDa LOC729792 0.030 PREDICTED: hypothetical protein LOC729792 0.030 PREDICTED: hypothetical protein LOC100294501 0.030 PREDICTED: hypothetical protein LOC100294249 0.030 PREDICTED: hypothetical protein XP_002344067 LOC100294238 0.030 PREDICTED: hypothetical protein LOC100294204 0.030 PREDICTED: hypothetical protein LOC730401 0.030 PREDICTED: hypothetical protein POM121C 0.030 POM121 membrane glycoprotein (rat)-like LOC729792 0.029 PREDICTED: hypothetical protein LOC100294136 0.029 PREDICTED: hypothetical protein LOC100294091 0.029 PREDICTED: hypothetical protein LOC100294236 0.027 PREDICTED: similar to diffuse panbronchiolitis crit... MUC5AC 0.026 mucin 5AC MUC5B 0.026 mucin 5, subtype B, tracheobronchial MUC19 0.025 PREDICTED: mucin 19, oligomeric Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.