Search of human proteins with 7657092

Search of human proteins with 7657092

BLASTP 2.2.11 [Jun-05-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= gi|7657092 interleukin 1 family, member 6 (epsilon) [Homo
sapiens]
         (158 letters)

Database: hs.faa 
           37,866 sequences; 18,247,518 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gi|7657092 interleukin 1 family, member 6 (epsilon) [Homo sapiens]    324   2e-89
gi|9665234 interleukin 1 family, member 9 [Homo sapiens]              183   5e-47
gi|27894313 interleukin 1 family, member 8 isoform 2 [Homo sapiens]   152   9e-38
gi|27894296 interleukin 1 family, member 7 isoform 2 [Homo sapiens]    82   1e-16
gi|20127524 interleukin 1 family, member 7 isoform 1 proprotein ...    82   1e-16
gi|27894302 interleukin 1 family, member 7 isoform 5 [Homo sapiens]    82   1e-16
gi|20070252 interleukin 1 family, member 8 isoform 1 [Homo sapiens]    82   1e-16
gi|27894310 interleukin 1 family, member 5 [Homo sapiens]              74   5e-14
gi|6912432 interleukin 1 family, member 5 [Homo sapiens]               74   5e-14
gi|27894321 interleukin 1 receptor antagonist isoform 4 [Homo sa...    71   4e-13
gi|27894319 interleukin 1 receptor antagonist isoform 1 precurso...    71   4e-13
gi|27894317 interleukin 1 receptor antagonist isoform 2 [Homo sa...    71   4e-13
gi|10835147 interleukin 1 receptor antagonist isoform 3 [Homo sa...    71   4e-13
gi|27894307 interleukin 1 family, member 10 [Homo sapiens]             69   2e-12
gi|27894304 interleukin 1 family, member 10 [Homo sapiens]             69   2e-12
gi|27894300 interleukin 1 family, member 7 isoform 4 [Homo sapiens]    62   3e-10
gi|27894298 interleukin 1 family, member 7 isoform 3 [Homo sapiens]    62   3e-10
gi|10835145 interleukin 1, beta proprotein [Homo sapiens]              59   2e-09
gi|115387123 protocadherin 15 isoform CD1-4 precursor [Homo sapi...    29   1.5  
gi|218505798 protocadherin 15 isoform CD1-10 precursor [Homo sap...    29   1.5  
gi|218505793 protocadherin 15 isoform CD3-2 precursor [Homo sapi...    29   1.5  
gi|218505791 protocadherin 15 isoform CD3-1 precursor [Homo sapi...    29   1.5  
gi|218505789 protocadherin 15 isoform CD2-2 precursor [Homo sapi...    29   1.5  
gi|218505787 protocadherin 15 isoform CD2-1 precursor [Homo sapi...    29   1.5  
gi|218505785 protocadherin 15 isoform CD1-9 precursor [Homo sapi...    29   1.5  
gi|218505783 protocadherin 15 isoform CD1-8 precursor [Homo sapi...    29   1.5  
gi|218505781 protocadherin 15 isoform CD1-7 precursor [Homo sapi...    29   1.5  
gi|218505779 protocadherin 15 isoform CD1-6 precursor [Homo sapi...    29   1.5  
gi|218505777 protocadherin 15 isoform CD1-2 precursor [Homo sapi...    29   1.5  
gi|218505775 protocadherin 15 isoform CD1-1 precursor [Homo sapi...    29   1.5  

>gi|7657092 interleukin 1 family, member 6 (epsilon) [Homo sapiens]
          Length = 158

 Score =  324 bits (830), Expect = 2e-89
 Identities = 158/158 (100%), Positives = 158/158 (100%)

Query: 1   MEKALKIDTPQQGSIQDINHRVWVLQDQTLIAVPRKDRMSPVTIALISCRHVETLEKDRG 60
           MEKALKIDTPQQGSIQDINHRVWVLQDQTLIAVPRKDRMSPVTIALISCRHVETLEKDRG
Sbjct: 1   MEKALKIDTPQQGSIQDINHRVWVLQDQTLIAVPRKDRMSPVTIALISCRHVETLEKDRG 60

Query: 61  NPIYLGLNGLNLCLMCAKVGDQPTLQLKEKDIMDLYNQPEPVKSFLFYHSQSGRNSTFES 120
           NPIYLGLNGLNLCLMCAKVGDQPTLQLKEKDIMDLYNQPEPVKSFLFYHSQSGRNSTFES
Sbjct: 61  NPIYLGLNGLNLCLMCAKVGDQPTLQLKEKDIMDLYNQPEPVKSFLFYHSQSGRNSTFES 120

Query: 121 VAFPGWFIAVSSEGGCPLILTQELGKANTTDFGLTMLF 158
           VAFPGWFIAVSSEGGCPLILTQELGKANTTDFGLTMLF
Sbjct: 121 VAFPGWFIAVSSEGGCPLILTQELGKANTTDFGLTMLF 158


>gi|9665234 interleukin 1 family, member 9 [Homo sapiens]
          Length = 169

 Score =  183 bits (465), Expect = 5e-47
 Identities = 88/147 (59%), Positives = 112/147 (76%), Gaps = 1/147 (0%)

Query: 10  PQQGSIQDINHRVWVLQDQTLIAVPRKDRMSPVTIALISCRHVETLEKDRGNPIYLGLNG 69
           P  G+I D+N +VW LQ Q L+AVPR D ++PVT+A+I+C++ E LE+ RG+PIYLG+  
Sbjct: 22  PITGTINDLNQQVWTLQGQNLVAVPRSDSVTPVTVAVITCKYPEALEQGRGDPIYLGIQN 81

Query: 70  LNLCLMCAKVGDQPTLQLKEKDIMDLYNQPEPVKSFLFYHSQSGRNSTFESVAFPGWFIA 129
             +CL C KVG+QPTLQLKE+ IMDLY QPEPVK FLFY +++GR ST ESVAFP WFIA
Sbjct: 82  PEMCLYCEKVGEQPTLQLKEQKIMDLYGQPEPVKPFLFYRAKTGRTSTLESVAFPDWFIA 141

Query: 130 VSSEGGCPLILTQELGKANTTDFGLTM 156
            SS+   P+ILT ELGK+  T F L +
Sbjct: 142 -SSKRDQPIILTSELGKSYNTAFELNI 167


>gi|27894313 interleukin 1 family, member 8 isoform 2 [Homo sapiens]
          Length = 157

 Score =  152 bits (385), Expect = 9e-38
 Identities = 71/145 (48%), Positives = 100/145 (68%)

Query: 10  PQQGSIQDINHRVWVLQDQTLIAVPRKDRMSPVTIALISCRHVETLEKDRGNPIYLGLNG 69
           P+  +I+D    VWVL   +LIA P    + PVT+ LI+CR  E  +K++GN +YLG+ G
Sbjct: 9   PKSYAIRDSRQMVWVLSGNSLIAAPLSRSIKPVTLHLIACRDTEFSDKEKGNMVYLGIKG 68

Query: 70  LNLCLMCAKVGDQPTLQLKEKDIMDLYNQPEPVKSFLFYHSQSGRNSTFESVAFPGWFIA 129
            +LCL CA++  +PTLQLKEK+IMDLY + +  K FLF+H++ G  S F+SV++PGWFIA
Sbjct: 69  KDLCLFCAEIQGKPTLQLKEKNIMDLYVEKKAQKPFLFFHNKEGSTSVFQSVSYPGWFIA 128

Query: 130 VSSEGGCPLILTQELGKANTTDFGL 154
            S+  G P+ LT+E G  N T+F L
Sbjct: 129 TSTTSGQPIFLTKERGITNNTNFYL 153


>gi|27894296 interleukin 1 family, member 7 isoform 2 [Homo sapiens]
          Length = 197

 Score = 82.4 bits (202), Expect = 1e-16
 Identities = 56/147 (38%), Positives = 79/147 (53%), Gaps = 6/147 (4%)

Query: 10  PQQGSIQDINHRVWVLQDQTLIAVPRKDRMSP-VTIALISCRHVETLEKDRGNPIYLGLN 68
           P++ SI D +H+V VL    LIAVP K+ + P +  AL S     + EK  G+PI LG++
Sbjct: 36  PKKFSIHDQDHKVLVLDSGNLIAVPDKNYIRPEIFFALASSLSSASAEK--GSPILLGVS 93

Query: 69  GLNLCLMCAKVGDQ--PTLQLKEKDIMDLYNQPEPVKS-FLFYHSQSGRNSTFESVAFPG 125
               CL C K   Q  P+LQLK++ +M L  Q E  +  F+FY +Q G  +  ES A PG
Sbjct: 94  KGEFCLYCDKDKGQSHPSLQLKKEKLMKLAAQKESARRPFIFYRAQVGSWNMLESAAHPG 153

Query: 126 WFIAVSSEGGCPLILTQELGKANTTDF 152
           WFI  S     P+ +T +       +F
Sbjct: 154 WFICTSCNCNEPVGVTDKFENRKHIEF 180


>gi|20127524 interleukin 1 family, member 7 isoform 1 proprotein
           [Homo sapiens]
          Length = 218

 Score = 82.4 bits (202), Expect = 1e-16
 Identities = 56/147 (38%), Positives = 79/147 (53%), Gaps = 6/147 (4%)

Query: 10  PQQGSIQDINHRVWVLQDQTLIAVPRKDRMSP-VTIALISCRHVETLEKDRGNPIYLGLN 68
           P++ SI D +H+V VL    LIAVP K+ + P +  AL S     + EK  G+PI LG++
Sbjct: 57  PKKFSIHDQDHKVLVLDSGNLIAVPDKNYIRPEIFFALASSLSSASAEK--GSPILLGVS 114

Query: 69  GLNLCLMCAKVGDQ--PTLQLKEKDIMDLYNQPEPVKS-FLFYHSQSGRNSTFESVAFPG 125
               CL C K   Q  P+LQLK++ +M L  Q E  +  F+FY +Q G  +  ES A PG
Sbjct: 115 KGEFCLYCDKDKGQSHPSLQLKKEKLMKLAAQKESARRPFIFYRAQVGSWNMLESAAHPG 174

Query: 126 WFIAVSSEGGCPLILTQELGKANTTDF 152
           WFI  S     P+ +T +       +F
Sbjct: 175 WFICTSCNCNEPVGVTDKFENRKHIEF 201


>gi|27894302 interleukin 1 family, member 7 isoform 5 [Homo sapiens]
          Length = 192

 Score = 82.4 bits (202), Expect = 1e-16
 Identities = 56/147 (38%), Positives = 79/147 (53%), Gaps = 6/147 (4%)

Query: 10  PQQGSIQDINHRVWVLQDQTLIAVPRKDRMSP-VTIALISCRHVETLEKDRGNPIYLGLN 68
           P++ SI D +H+V VL    LIAVP K+ + P +  AL S     + EK  G+PI LG++
Sbjct: 31  PKKFSIHDQDHKVLVLDSGNLIAVPDKNYIRPEIFFALASSLSSASAEK--GSPILLGVS 88

Query: 69  GLNLCLMCAKVGDQ--PTLQLKEKDIMDLYNQPEPVKS-FLFYHSQSGRNSTFESVAFPG 125
               CL C K   Q  P+LQLK++ +M L  Q E  +  F+FY +Q G  +  ES A PG
Sbjct: 89  KGEFCLYCDKDKGQSHPSLQLKKEKLMKLAAQKESARRPFIFYRAQVGSWNMLESAAHPG 148

Query: 126 WFIAVSSEGGCPLILTQELGKANTTDF 152
           WFI  S     P+ +T +       +F
Sbjct: 149 WFICTSCNCNEPVGVTDKFENRKHIEF 175


>gi|20070252 interleukin 1 family, member 8 isoform 1 [Homo
          sapiens]
          Length = 164

 Score = 82.4 bits (202), Expect = 1e-16
 Identities = 38/85 (44%), Positives = 55/85 (64%)

Query: 10 PQQGSIQDINHRVWVLQDQTLIAVPRKDRMSPVTIALISCRHVETLEKDRGNPIYLGLNG 69
          P+  +I+D    VWVL   +LIA P    + PVT+ LI+CR  E  +K++GN +YLG+ G
Sbjct: 9  PKSYAIRDSRQMVWVLSGNSLIAAPLSRSIKPVTLHLIACRDTEFSDKEKGNMVYLGIKG 68

Query: 70 LNLCLMCAKVGDQPTLQLKEKDIMD 94
           +LCL CA++  +PTLQLK +   D
Sbjct: 69 KDLCLFCAEIQGKPTLQLKLQGSQD 93


>gi|27894310 interleukin 1 family, member 5 [Homo sapiens]
          Length = 155

 Score = 73.9 bits (180), Expect = 5e-14
 Identities = 37/82 (45%), Positives = 50/82 (60%), Gaps = 1/82 (1%)

Query: 61  NPIYLGLNGLNLCLMCAKVGDQPTLQLKEKDIMDLYNQPEPVKSFLFYHSQSGRNSTFES 120
           +P+ LG+ G + CL C  VG +PTL L+  +IM+LY   +  KSF FY    G  S+FES
Sbjct: 55  SPVILGVQGGSQCLSCG-VGQEPTLTLEPVNIMELYLGAKESKSFTFYRRDMGLTSSFES 113

Query: 121 VAFPGWFIAVSSEGGCPLILTQ 142
            A+PGWF+    E   P+ LTQ
Sbjct: 114 AAYPGWFLCTVPEADQPVRLTQ 135


>gi|6912432 interleukin 1 family, member 5 [Homo sapiens]
          Length = 155

 Score = 73.9 bits (180), Expect = 5e-14
 Identities = 37/82 (45%), Positives = 50/82 (60%), Gaps = 1/82 (1%)

Query: 61  NPIYLGLNGLNLCLMCAKVGDQPTLQLKEKDIMDLYNQPEPVKSFLFYHSQSGRNSTFES 120
           +P+ LG+ G + CL C  VG +PTL L+  +IM+LY   +  KSF FY    G  S+FES
Sbjct: 55  SPVILGVQGGSQCLSCG-VGQEPTLTLEPVNIMELYLGAKESKSFTFYRRDMGLTSSFES 113

Query: 121 VAFPGWFIAVSSEGGCPLILTQ 142
            A+PGWF+    E   P+ LTQ
Sbjct: 114 AAYPGWFLCTVPEADQPVRLTQ 135


>gi|27894321 interleukin 1 receptor antagonist isoform 4 [Homo
           sapiens]
          Length = 143

 Score = 70.9 bits (172), Expect = 4e-13
 Identities = 42/127 (33%), Positives = 66/127 (51%), Gaps = 7/127 (5%)

Query: 15  IQDINHRVWVLQDQTLIAVPRKDRMSPVTIALISCRHVETLEKDRGNPIYLGLNGLNLCL 74
           I D+N + + L++  L+A      +    + L     V  +E    + ++LG++G  +CL
Sbjct: 6   IWDVNQKTFYLRNNQLVA----GYLQGPNVNLEEKIDVVPIEP---HALFLGIHGGKMCL 58

Query: 75  MCAKVGDQPTLQLKEKDIMDLYNQPEPVKSFLFYHSQSGRNSTFESVAFPGWFIAVSSEG 134
            C K GD+  LQL+  +I DL    +  K F F  S SG  ++FES A PGWF+  + E 
Sbjct: 59  SCVKSGDETRLQLEAVNITDLSENRKQDKRFAFIRSDSGPTTSFESAACPGWFLCTAMEA 118

Query: 135 GCPLILT 141
             P+ LT
Sbjct: 119 DQPVSLT 125


>gi|27894319 interleukin 1 receptor antagonist isoform 1 precursor
           [Homo sapiens]
          Length = 177

 Score = 70.9 bits (172), Expect = 4e-13
 Identities = 42/127 (33%), Positives = 66/127 (51%), Gaps = 7/127 (5%)

Query: 15  IQDINHRVWVLQDQTLIAVPRKDRMSPVTIALISCRHVETLEKDRGNPIYLGLNGLNLCL 74
           I D+N + + L++  L+A      +    + L     V  +E    + ++LG++G  +CL
Sbjct: 40  IWDVNQKTFYLRNNQLVA----GYLQGPNVNLEEKIDVVPIEP---HALFLGIHGGKMCL 92

Query: 75  MCAKVGDQPTLQLKEKDIMDLYNQPEPVKSFLFYHSQSGRNSTFESVAFPGWFIAVSSEG 134
            C K GD+  LQL+  +I DL    +  K F F  S SG  ++FES A PGWF+  + E 
Sbjct: 93  SCVKSGDETRLQLEAVNITDLSENRKQDKRFAFIRSDSGPTTSFESAACPGWFLCTAMEA 152

Query: 135 GCPLILT 141
             P+ LT
Sbjct: 153 DQPVSLT 159


>gi|27894317 interleukin 1 receptor antagonist isoform 2 [Homo
           sapiens]
          Length = 180

 Score = 70.9 bits (172), Expect = 4e-13
 Identities = 42/127 (33%), Positives = 66/127 (51%), Gaps = 7/127 (5%)

Query: 15  IQDINHRVWVLQDQTLIAVPRKDRMSPVTIALISCRHVETLEKDRGNPIYLGLNGLNLCL 74
           I D+N + + L++  L+A      +    + L     V  +E    + ++LG++G  +CL
Sbjct: 43  IWDVNQKTFYLRNNQLVA----GYLQGPNVNLEEKIDVVPIEP---HALFLGIHGGKMCL 95

Query: 75  MCAKVGDQPTLQLKEKDIMDLYNQPEPVKSFLFYHSQSGRNSTFESVAFPGWFIAVSSEG 134
            C K GD+  LQL+  +I DL    +  K F F  S SG  ++FES A PGWF+  + E 
Sbjct: 96  SCVKSGDETRLQLEAVNITDLSENRKQDKRFAFIRSDSGPTTSFESAACPGWFLCTAMEA 155

Query: 135 GCPLILT 141
             P+ LT
Sbjct: 156 DQPVSLT 162


>gi|10835147 interleukin 1 receptor antagonist isoform 3 [Homo
           sapiens]
          Length = 159

 Score = 70.9 bits (172), Expect = 4e-13
 Identities = 42/127 (33%), Positives = 66/127 (51%), Gaps = 7/127 (5%)

Query: 15  IQDINHRVWVLQDQTLIAVPRKDRMSPVTIALISCRHVETLEKDRGNPIYLGLNGLNLCL 74
           I D+N + + L++  L+A      +    + L     V  +E    + ++LG++G  +CL
Sbjct: 22  IWDVNQKTFYLRNNQLVA----GYLQGPNVNLEEKIDVVPIEP---HALFLGIHGGKMCL 74

Query: 75  MCAKVGDQPTLQLKEKDIMDLYNQPEPVKSFLFYHSQSGRNSTFESVAFPGWFIAVSSEG 134
            C K GD+  LQL+  +I DL    +  K F F  S SG  ++FES A PGWF+  + E 
Sbjct: 75  SCVKSGDETRLQLEAVNITDLSENRKQDKRFAFIRSDSGPTTSFESAACPGWFLCTAMEA 134

Query: 135 GCPLILT 141
             P+ LT
Sbjct: 135 DQPVSLT 141


>gi|27894307 interleukin 1 family, member 10 [Homo sapiens]
          Length = 152

 Score = 68.6 bits (166), Expect = 2e-12
 Identities = 34/91 (37%), Positives = 52/91 (57%)

Query: 62  PIYLGLNGLNLCLMCAKVGDQPTLQLKEKDIMDLYNQPEPVKSFLFYHSQSGRNSTFESV 121
           PI+LG+ G + CL C +  + P+LQL++ +I +LY   E    F F+ S SG     E+ 
Sbjct: 56  PIFLGIQGGSRCLACVETEEGPSLQLEDVNIEELYKGGEEATRFTFFQSSSGSAFRLEAA 115

Query: 122 AFPGWFIAVSSEGGCPLILTQELGKANTTDF 152
           A+PGWF+   +E   P+ LT+E   +  T F
Sbjct: 116 AWPGWFLCGPAEPQQPVQLTKESEPSARTKF 146


>gi|27894304 interleukin 1 family, member 10 [Homo sapiens]
          Length = 152

 Score = 68.6 bits (166), Expect = 2e-12
 Identities = 34/91 (37%), Positives = 52/91 (57%)

Query: 62  PIYLGLNGLNLCLMCAKVGDQPTLQLKEKDIMDLYNQPEPVKSFLFYHSQSGRNSTFESV 121
           PI+LG+ G + CL C +  + P+LQL++ +I +LY   E    F F+ S SG     E+ 
Sbjct: 56  PIFLGIQGGSRCLACVETEEGPSLQLEDVNIEELYKGGEEATRFTFFQSSSGSAFRLEAA 115

Query: 122 AFPGWFIAVSSEGGCPLILTQELGKANTTDF 152
           A+PGWF+   +E   P+ LT+E   +  T F
Sbjct: 116 AWPGWFLCGPAEPQQPVQLTKESEPSARTKF 146


>gi|27894300 interleukin 1 family, member 7 isoform 4 [Homo sapiens]
          Length = 178

 Score = 61.6 bits (148), Expect = 3e-10
 Identities = 36/98 (36%), Positives = 53/98 (54%), Gaps = 3/98 (3%)

Query: 58  DRGNPIYLGLNGLNLCLMCAKVGDQ--PTLQLKEKDIMDLYNQPEPVKS-FLFYHSQSGR 114
           ++G+PI LG++    CL C K   Q  P+LQLK++ +M L  Q E  +  F+FY +Q G 
Sbjct: 64  EKGSPILLGVSKGEFCLYCDKDKGQSHPSLQLKKEKLMKLAAQKESARRPFIFYRAQVGS 123

Query: 115 NSTFESVAFPGWFIAVSSEGGCPLILTQELGKANTTDF 152
            +  ES A PGWFI  S     P+ +T +       +F
Sbjct: 124 WNMLESAAHPGWFICTSCNCNEPVGVTDKFENRKHIEF 161


>gi|27894298 interleukin 1 family, member 7 isoform 3 [Homo sapiens]
          Length = 157

 Score = 61.6 bits (148), Expect = 3e-10
 Identities = 36/98 (36%), Positives = 53/98 (54%), Gaps = 3/98 (3%)

Query: 58  DRGNPIYLGLNGLNLCLMCAKVGDQ--PTLQLKEKDIMDLYNQPEPVKS-FLFYHSQSGR 114
           ++G+PI LG++    CL C K   Q  P+LQLK++ +M L  Q E  +  F+FY +Q G 
Sbjct: 43  EKGSPILLGVSKGEFCLYCDKDKGQSHPSLQLKKEKLMKLAAQKESARRPFIFYRAQVGS 102

Query: 115 NSTFESVAFPGWFIAVSSEGGCPLILTQELGKANTTDF 152
            +  ES A PGWFI  S     P+ +T +       +F
Sbjct: 103 WNMLESAAHPGWFICTSCNCNEPVGVTDKFENRKHIEF 140


>gi|10835145 interleukin 1, beta proprotein [Homo sapiens]
          Length = 269

 Score = 58.5 bits (140), Expect = 2e-09
 Identities = 39/113 (34%), Positives = 54/113 (47%), Gaps = 3/113 (2%)

Query: 46  LISCRHVETLEKDRGNPIYLGLNGLNLCLMCAKVGDQPTLQLKEKDIMDLYNQPEPVKSF 105
           + S   V+  E +   P+ LGL   NL L C    D+PTLQL+  D  + Y + +  K F
Sbjct: 157 VFSMSFVQGEESNDKIPVALGLKEKNLYLSCVLKDDKPTLQLESVDPKN-YPKKKMEKRF 215

Query: 106 LFYHSQSGRNSTFESVAFPGWFIAVSSEGGCPLILTQELGKANTTDFGLTMLF 158
           +F   +      FES  FP W+I+ S     P+ L    G  + TDF  TM F
Sbjct: 216 VFNKIEINNKLEFESAQFPNWYISTSQAENMPVFLGGTKGGQDITDF--TMQF 266


>gi|115387123 protocadherin 15 isoform CD1-4 precursor [Homo
           sapiens]
          Length = 1955

 Score = 29.3 bits (64), Expect = 1.5
 Identities = 14/40 (35%), Positives = 22/40 (55%)

Query: 71  NLCLMCAKVGDQPTLQLKEKDIMDLYNQPEPVKSFLFYHS 110
           N+ +     G  PT++L  KD +D +   +PVK  LF +S
Sbjct: 59  NMLIKGTAGGPDPTIELSLKDNVDYWVLMDPVKQMLFLNS 98


>gi|218505798 protocadherin 15 isoform CD1-10 precursor [Homo
           sapiens]
          Length = 1932

 Score = 29.3 bits (64), Expect = 1.5
 Identities = 14/40 (35%), Positives = 22/40 (55%)

Query: 71  NLCLMCAKVGDQPTLQLKEKDIMDLYNQPEPVKSFLFYHS 110
           N+ +     G  PT++L  KD +D +   +PVK  LF +S
Sbjct: 37  NMLIKGTAGGPDPTIELSLKDNVDYWVLMDPVKQMLFLNS 76


>gi|218505793 protocadherin 15 isoform CD3-2 precursor [Homo
           sapiens]
          Length = 1677

 Score = 29.3 bits (64), Expect = 1.5
 Identities = 14/40 (35%), Positives = 22/40 (55%)

Query: 71  NLCLMCAKVGDQPTLQLKEKDIMDLYNQPEPVKSFLFYHS 110
           N+ +     G  PT++L  KD +D +   +PVK  LF +S
Sbjct: 59  NMLIKGTAGGPDPTIELSLKDNVDYWVLMDPVKQMLFLNS 98


>gi|218505791 protocadherin 15 isoform CD3-1 precursor [Homo
           sapiens]
          Length = 1682

 Score = 29.3 bits (64), Expect = 1.5
 Identities = 14/40 (35%), Positives = 22/40 (55%)

Query: 71  NLCLMCAKVGDQPTLQLKEKDIMDLYNQPEPVKSFLFYHS 110
           N+ +     G  PT++L  KD +D +   +PVK  LF +S
Sbjct: 64  NMLIKGTAGGPDPTIELSLKDNVDYWVLMDPVKQMLFLNS 103


>gi|218505789 protocadherin 15 isoform CD2-2 precursor [Homo
           sapiens]
          Length = 1539

 Score = 29.3 bits (64), Expect = 1.5
 Identities = 14/40 (35%), Positives = 22/40 (55%)

Query: 71  NLCLMCAKVGDQPTLQLKEKDIMDLYNQPEPVKSFLFYHS 110
           N+ +     G  PT++L  KD +D +   +PVK  LF +S
Sbjct: 59  NMLIKGTAGGPDPTIELSLKDNVDYWVLMDPVKQMLFLNS 98


>gi|218505787 protocadherin 15 isoform CD2-1 precursor [Homo
           sapiens]
          Length = 1790

 Score = 29.3 bits (64), Expect = 1.5
 Identities = 14/40 (35%), Positives = 22/40 (55%)

Query: 71  NLCLMCAKVGDQPTLQLKEKDIMDLYNQPEPVKSFLFYHS 110
           N+ +     G  PT++L  KD +D +   +PVK  LF +S
Sbjct: 64  NMLIKGTAGGPDPTIELSLKDNVDYWVLMDPVKQMLFLNS 103


>gi|218505785 protocadherin 15 isoform CD1-9 precursor [Homo
           sapiens]
          Length = 1935

 Score = 29.3 bits (64), Expect = 1.5
 Identities = 14/40 (35%), Positives = 22/40 (55%)

Query: 71  NLCLMCAKVGDQPTLQLKEKDIMDLYNQPEPVKSFLFYHS 110
           N+ +     G  PT++L  KD +D +   +PVK  LF +S
Sbjct: 37  NMLIKGTAGGPDPTIELSLKDNVDYWVLMDPVKQMLFLNS 76


>gi|218505783 protocadherin 15 isoform CD1-8 precursor [Homo
           sapiens]
          Length = 1915

 Score = 29.3 bits (64), Expect = 1.5
 Identities = 14/40 (35%), Positives = 22/40 (55%)

Query: 71  NLCLMCAKVGDQPTLQLKEKDIMDLYNQPEPVKSFLFYHS 110
           N+ +     G  PT++L  KD +D +   +PVK  LF +S
Sbjct: 59  NMLIKGTAGGPDPTIELSLKDNVDYWVLMDPVKQMLFLNS 98


>gi|218505781 protocadherin 15 isoform CD1-7 precursor [Homo
           sapiens]
          Length = 1952

 Score = 29.3 bits (64), Expect = 1.5
 Identities = 14/40 (35%), Positives = 22/40 (55%)

Query: 71  NLCLMCAKVGDQPTLQLKEKDIMDLYNQPEPVKSFLFYHS 110
           N+ +     G  PT++L  KD +D +   +PVK  LF +S
Sbjct: 59  NMLIKGTAGGPDPTIELSLKDNVDYWVLMDPVKQMLFLNS 98


>gi|218505779 protocadherin 15 isoform CD1-6 precursor [Homo
           sapiens]
          Length = 1886

 Score = 29.3 bits (64), Expect = 1.5
 Identities = 14/40 (35%), Positives = 22/40 (55%)

Query: 71  NLCLMCAKVGDQPTLQLKEKDIMDLYNQPEPVKSFLFYHS 110
           N+ +     G  PT++L  KD +D +   +PVK  LF +S
Sbjct: 59  NMLIKGTAGGPDPTIELSLKDNVDYWVLMDPVKQMLFLNS 98


>gi|218505777 protocadherin 15 isoform CD1-2 precursor [Homo
           sapiens]
          Length = 1957

 Score = 29.3 bits (64), Expect = 1.5
 Identities = 14/40 (35%), Positives = 22/40 (55%)

Query: 71  NLCLMCAKVGDQPTLQLKEKDIMDLYNQPEPVKSFLFYHS 110
           N+ +     G  PT++L  KD +D +   +PVK  LF +S
Sbjct: 59  NMLIKGTAGGPDPTIELSLKDNVDYWVLMDPVKQMLFLNS 98


>gi|218505775 protocadherin 15 isoform CD1-1 precursor [Homo
           sapiens]
          Length = 1962

 Score = 29.3 bits (64), Expect = 1.5
 Identities = 14/40 (35%), Positives = 22/40 (55%)

Query: 71  NLCLMCAKVGDQPTLQLKEKDIMDLYNQPEPVKSFLFYHS 110
           N+ +     G  PT++L  KD +D +   +PVK  LF +S
Sbjct: 64  NMLIKGTAGGPDPTIELSLKDNVDYWVLMDPVKQMLFLNS 103


  Database: hs.faa
    Posted date:  Aug 4, 2009  4:42 PM
  Number of letters in database: 18,247,518
  Number of sequences in database:  37,866
  
Lambda     K      H
   0.320    0.137    0.415 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 6,196,219
Number of Sequences: 37866
Number of extensions: 265732
Number of successful extensions: 490
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 31
Number of HSP's successfully gapped in prelim test: 5
Number of HSP's that attempted gapping in prelim test: 442
Number of HSP's gapped (non-prelim): 36
length of query: 158
length of database: 18,247,518
effective HSP length: 94
effective length of query: 64
effective length of database: 14,688,114
effective search space: 940039296
effective search space used: 940039296
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 57 (26.6 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.