Guide to the Human Genome
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Name: IL1F9 Sequence: fasta or formatted (169aa) NCBI GI: 9665234
Description:

interleukin 1 family, member 9

Referenced in:

Interleukins and Their Receptors

Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             5.3          9           1
 C cysteine            2.4          4           1
 D aspartate           5.3          9           1
 E glutamate           5.9         10           1
 F phenylalanine       3.0          5           1
 G glycine             8.3         14           3
 H histidine           0.0          0           0
 I isoleucine          5.9         10           2
 K lysine              5.3          9           1
 L leucine             8.3         14           1
 M methionine          2.4          4           1
 N asparagine          4.1          7           1
 P proline             7.7         13           1
 Q glutamine           7.1         12           2
 R arginine            4.1          7           1
 S serine              5.3          9           2
 T threonine           7.7         13           1
 V valine              6.5         11           1
 W tryptophan          1.2          2           1
 Y tyrosine            4.1          7           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   interleukin 1 family, member 9 
IL1F6                 0.488   interleukin 1 family, member 6 (epsilon) 
IL1F8                 0.346   interleukin 1 family, member 8 isoform 2 
IL1F7                 0.198   interleukin 1 family, member 7 isoform 2 
IL1F7                 0.198   interleukin 1 family, member 7 isoform 1 proprotein ...
IL1F7                 0.198   interleukin 1 family, member 7 isoform 5 
IL1F8                 0.167   interleukin 1 family, member 8 isoform 1 
IL1F7                 0.157   interleukin 1 family, member 7 isoform 4 
IL1F7                 0.157   interleukin 1 family, member 7 isoform 3 
IL1F10                0.139   interleukin 1 family, member 10 
IL1F10                0.139   interleukin 1 family, member 10 
IL1F5                 0.139   interleukin 1 family, member 5 
IL1F5                 0.139   interleukin 1 family, member 5 
IL1RN                 0.123   interleukin 1 receptor antagonist isoform 4 
IL1RN                 0.123   interleukin 1 receptor antagonist isoform 1 precurso...
IL1RN                 0.123   interleukin 1 receptor antagonist isoform 2 
IL1RN                 0.123   interleukin 1 receptor antagonist isoform 3 
IL1B                  0.065   interleukin 1, beta proprotein 
BDH2                  0.009   3-hydroxybutyrate dehydrogenase, type 2 
MYH11                 0.009   smooth muscle myosin heavy chain 11 isoform SM1A [Ho...
MYH11                 0.009   smooth muscle myosin heavy chain 11 isoform SM1B [Ho...
MYH11                 0.009   smooth muscle myosin heavy chain 11 isoform SM2B [Ho...
MYH11                 0.009   smooth muscle myosin heavy chain 11 isoform SM2A [Ho...
RASAL1                0.006   RAS protein activator like 1 
CEACAM19              0.006   carcinoembryonic antigen-related cell adhesion mole...
CEACAM19              0.006   carcinoembryonic antigen-related cell adhesion molec...
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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