Guide to the Human Genome
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Name: IL1F10 Sequence: fasta or formatted (152aa) NCBI GI: 27894304
Description:

interleukin 1 family, member 10

Referenced in:

Interleukins and Their Receptors

Other entries for this name:
alt mRNA [152aa] interleukin 1 family, member 10
Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             9.2         14           3
 C cysteine            4.6          7           2
 D aspartate           3.3          5           1
 E glutamate           9.2         14           2
 F phenylalanine       5.3          8           2
 G glycine             7.9         12           2
 H histidine           0.0          0           0
 I isoleucine          4.6          7           2
 K lysine              4.6          7           1
 L leucine             9.2         14           2
 M methionine          1.3          2           1
 N asparagine          2.0          3           1
 P proline             6.6         10           1
 Q glutamine           5.9          9           2
 R arginine            5.3          8           1
 S serine              6.6         10           3
 T threonine           4.6          7           1
 V valine              3.9          6           1
 W tryptophan          2.0          3           1
 Y tyrosine            3.9          6           2
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   interleukin 1 family, member 10 
IL1F10                1.000   interleukin 1 family, member 10 
IL1F5                 0.287   interleukin 1 family, member 5 
IL1F5                 0.287   interleukin 1 family, member 5 
IL1RN                 0.246   interleukin 1 receptor antagonist isoform 4 
IL1RN                 0.246   interleukin 1 receptor antagonist isoform 1 precurso...
IL1RN                 0.246   interleukin 1 receptor antagonist isoform 2 
IL1RN                 0.246   interleukin 1 receptor antagonist isoform 3 
IL1F8                 0.160   interleukin 1 family, member 8 isoform 2 
IL1F9                 0.154   interleukin 1 family, member 9 
IL1F6                 0.150   interleukin 1 family, member 6 (epsilon) 
IL1F7                 0.133   interleukin 1 family, member 7 isoform 3 
IL1F7                 0.123   interleukin 1 family, member 7 isoform 2 
IL1F7                 0.123   interleukin 1 family, member 7 isoform 1 proprotein ...
IL1F7                 0.123   interleukin 1 family, member 7 isoform 5 
IL1F7                 0.123   interleukin 1 family, member 7 isoform 4 
IL1B                  0.065   interleukin 1, beta proprotein 
CUBN                  0.031   cubilin 
IL1F8                 0.017   interleukin 1 family, member 8 isoform 1 
UBE2O                 0.014   ubiquitin-conjugating enzyme E2O 
LOC100130667          0.010   PREDICTED: hypothetical protein 
LOC100130667          0.010   PREDICTED: hypothetical protein 
LOC100130667          0.010   PREDICTED: hypothetical protein 
LOC100292378          0.007   PREDICTED: hypothetical protein 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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