Guide to the Human Genome
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Name: IL1F7 Sequence: fasta or formatted (192aa) NCBI GI: 27894302
Description:

interleukin 1 family, member 7 isoform 5

Referenced in:

Interleukins and Their Receptors

Other entries for this name:
alt prot [218aa] interleukin 1 family, member 7 isoform 1 proprotein
alt prot [197aa] interleukin 1 family, member 7 isoform 2
alt prot [157aa] interleukin 1 family, member 7 isoform 3
alt prot [178aa] interleukin 1 family, member 7 isoform 4
Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             6.2         12           2
 C cysteine            3.6          7           1
 D aspartate           4.7          9           1
 E glutamate           6.8         13           1
 F phenylalanine       5.7         11           2
 G glycine             5.7         11           1
 H histidine           2.6          5           1
 I isoleucine          4.2          8           1
 K lysine             11.5         22           2
 L leucine             7.8         15           2
 M methionine          2.1          4           1
 N asparagine          4.7          9           1
 P proline             5.7         11           1
 Q glutamine           3.1          6           1
 R arginine            4.7          9           2
 S serine             10.9         21           2
 T threonine           2.1          4           1
 V valine              5.2         10           1
 W tryptophan          1.0          2           1
 Y tyrosine            1.6          3           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   interleukin 1 family, member 7 isoform 5 
IL1F7                 0.884   interleukin 1 family, member 7 isoform 2 
IL1F7                 0.873   interleukin 1 family, member 7 isoform 1 proprotein ...
IL1F7                 0.674   interleukin 1 family, member 7 isoform 4 
IL1F7                 0.658   interleukin 1 family, member 7 isoform 3 
IL1F8                 0.178   interleukin 1 family, member 8 isoform 2 
IL1F9                 0.173   interleukin 1 family, member 9 
IL1F6                 0.154   interleukin 1 family, member 6 (epsilon) 
IL1F5                 0.113   interleukin 1 family, member 5 
IL1F5                 0.113   interleukin 1 family, member 5 
IL1F10                0.097   interleukin 1 family, member 10 
IL1F10                0.097   interleukin 1 family, member 10 
IL1RN                 0.089   interleukin 1 receptor antagonist isoform 1 precurso...
IL1RN                 0.089   interleukin 1 receptor antagonist isoform 2 
IL1RN                 0.089   interleukin 1 receptor antagonist isoform 3 
IL1RN                 0.086   interleukin 1 receptor antagonist isoform 4 
IL1F8                 0.065   interleukin 1 family, member 8 isoform 1 
IL1B                  0.030   interleukin 1, beta proprotein 
LOC100288695          0.013   PREDICTED: hypothetical protein XP_002342298 
LIMS1                 0.013   LIM and senescent cell antigen-like domains 1 
LIMS2                 0.013   LIM and senescent cell antigen-like domains 2 isofo...
LIMS2                 0.013   LIM and senescent cell antigen-like domains 2 isofo...
LIMS2                 0.013   LIM and senescent cell antigen-like domains 2 isofo...
LIMS2                 0.013   LIM and senescent cell antigen-like domains 2 isofor...
KNTC1                 0.011   Rough Deal homolog, centromere/kinetochore protein [H...
LOC100294418          0.011   PREDICTED: hypothetical protein 
AKAP6                 0.011   A-kinase anchor protein 6 
KLF4                  0.011   Kruppel-like factor 4 (gut) 
C1orf125              0.008   hypothetical protein LOC126859 isoform 1 
CDYL                  0.008   chromodomain protein, Y chromosome-like isoform a [...
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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