Guide to the Human Genome
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Name: IL1F7 Sequence: fasta or formatted (218aa) NCBI GI: 20127524
Description:

interleukin 1 family, member 7 isoform 1 proprotein

Referenced in:

Interleukins and Their Receptors

Other entries for this name:
alt prot [197aa] interleukin 1 family, member 7 isoform 2
alt prot [157aa] interleukin 1 family, member 7 isoform 3
alt prot [178aa] interleukin 1 family, member 7 isoform 4
alt prot [192aa] interleukin 1 family, member 7 isoform 5
Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             6.0         13           2
 C cysteine            3.7          8           2
 D aspartate           5.0         11           1
 E glutamate           7.8         17           1
 F phenylalanine       5.5         12           2
 G glycine             6.0         13           1
 H histidine           2.8          6           1
 I isoleucine          3.7          8           1
 K lysine              9.2         20           2
 L leucine             7.8         17           2
 M methionine          2.8          6           1
 N asparagine          4.6         10           1
 P proline             7.8         17           1
 Q glutamine           3.2          7           1
 R arginine            2.3          5           2
 S serine             11.5         25           2
 T threonine           1.8          4           1
 V valine              6.0         13           1
 W tryptophan          1.4          3           1
 Y tyrosine            1.4          3           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   interleukin 1 family, member 7 isoform 1 proprotein ... 
IL1F7                 0.862   interleukin 1 family, member 7 isoform 2 
IL1F7                 0.755   interleukin 1 family, member 7 isoform 5 
IL1F7                 0.746   interleukin 1 family, member 7 isoform 4 
IL1F7                 0.569   interleukin 1 family, member 7 isoform 3 
IL1F8                 0.154   interleukin 1 family, member 8 isoform 2 
IL1F9                 0.149   interleukin 1 family, member 9 
IL1F6                 0.133   interleukin 1 family, member 6 (epsilon) 
IL1F5                 0.098   interleukin 1 family, member 5 
IL1F5                 0.098   interleukin 1 family, member 5 
IL1F10                0.084   interleukin 1 family, member 10 
IL1F10                0.084   interleukin 1 family, member 10 
IL1RN                 0.077   interleukin 1 receptor antagonist isoform 1 precurso...
IL1RN                 0.077   interleukin 1 receptor antagonist isoform 2 
IL1RN                 0.077   interleukin 1 receptor antagonist isoform 3 
IL1RN                 0.075   interleukin 1 receptor antagonist isoform 4 
IL1F8                 0.056   interleukin 1 family, member 8 isoform 1 
IL1B                  0.033   interleukin 1, beta proprotein 
PIK3R5                0.012   phosphoinositide-3-kinase, regulatory subunit 5 [Ho...
PIK3R5                0.012   phosphoinositide-3-kinase, regulatory subunit 5 [Ho...
LOC100288695          0.012   PREDICTED: hypothetical protein XP_002342298 
LIMS1                 0.012   LIM and senescent cell antigen-like domains 1 
LIMS2                 0.012   LIM and senescent cell antigen-like domains 2 isofo...
LIMS2                 0.012   LIM and senescent cell antigen-like domains 2 isofo...
LIMS2                 0.012   LIM and senescent cell antigen-like domains 2 isofo...
LIMS2                 0.012   LIM and senescent cell antigen-like domains 2 isofor...
EP300                 0.012   E1A binding protein p300 
MLLT3                 0.012   myeloid/lymphoid or mixed-lineage leukemia (trithor...
LOC100294418          0.009   PREDICTED: hypothetical protein 
KLF4                  0.009   Kruppel-like factor 4 (gut) 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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