Guide to the Human Genome
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Name: IL1F5 Sequence: fasta or formatted (155aa) NCBI GI: 27894310
Description:

interleukin 1 family, member 5

Referenced in:

Interleukins and Their Receptors

Other entries for this name:
alt mRNA [155aa] interleukin 1 family, member 5
Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             6.5         10           2
 C cysteine            3.2          5           1
 D aspartate           3.9          6           1
 E glutamate           5.8          9           2
 F phenylalanine       4.5          7           1
 G glycine             9.7         15           2
 H histidine           1.3          2           1
 I isoleucine          3.2          5           1
 K lysine              3.9          6           1
 L leucine            12.9         20           2
 M methionine          2.6          4           1
 N asparagine          3.9          6           2
 P proline             5.8          9           1
 Q glutamine           5.2          8           2
 R arginine            3.2          5           2
 S serine              7.7         12           2
 T threonine           4.5          7           1
 V valine              7.1         11           2
 W tryptophan          1.9          3           1
 Y tyrosine            3.2          5           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   interleukin 1 family, member 5 
IL1F5                 1.000   interleukin 1 family, member 5 
IL1RN                 0.331   interleukin 1 receptor antagonist isoform 4 
IL1RN                 0.331   interleukin 1 receptor antagonist isoform 1 precurso...
IL1RN                 0.331   interleukin 1 receptor antagonist isoform 2 
IL1RN                 0.331   interleukin 1 receptor antagonist isoform 3 
IL1F10                0.284   interleukin 1 family, member 10 
IL1F10                0.284   interleukin 1 family, member 10 
IL1F8                 0.176   interleukin 1 family, member 8 isoform 2 
IL1F6                 0.166   interleukin 1 family, member 6 (epsilon) 
IL1F9                 0.152   interleukin 1 family, member 9 
IL1F7                 0.142   interleukin 1 family, member 7 isoform 2 
IL1F7                 0.142   interleukin 1 family, member 7 isoform 1 proprotein ...
IL1F7                 0.142   interleukin 1 family, member 7 isoform 5 
IL1F7                 0.132   interleukin 1 family, member 7 isoform 4 
IL1F7                 0.132   interleukin 1 family, member 7 isoform 3 
IL1B                  0.071   interleukin 1, beta proprotein 
LOC387763             0.010   hypothetical protein LOC387763 
RECQL                 0.010   RecQ protein-like 
RECQL                 0.010   RecQ protein-like 
LOC338667             0.007   PREDICTED: hypothetical protein LOC338667 
LOC338667             0.007   PREDICTED: hypothetical protein LOC338667 
LOC338667             0.007   PREDICTED: hypothetical protein LOC338667 
VPS13A                0.007   vacuolar protein sorting 13A isoform A 
VPS13A                0.007   vacuolar protein sorting 13A isoform C 
LTB4R                 0.007   leukotriene B4 receptor 
LTB4R                 0.007   leukotriene B4 receptor 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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