RC3H1 35376

Name: RC3H1	Sequence: fasta or formatted (1133aa)		NCBI GI: 73695473
Description: roquin		Referenced in: Ring Finger Proteins Zinc Finger Proteins
Composition: Amino acid Percentage Count Longest homopolymer A alanine 6.5 74 2 C cysteine 1.5 17 1 D aspartate 4.3 49 3 E glutamate 6.5 74 3 F phenylalanine 1.9 21 1 G glycine 5.5 62 3 H histidine 2.5 28 1 I isoleucine 4.0 45 2 K lysine 4.3 49 2 L leucine 9.4 107 2 M methionine 2.1 24 2 N asparagine 3.0 34 2 P proline 11.4 129 7 Q glutamine 7.4 84 3 R arginine 6.3 71 3 S serine 9.3 105 3 T threonine 4.8 54 2 V valine 5.4 61 2 W tryptophan 0.6 7 1 Y tyrosine 3.4 38 2			Comparative genomics: Search single species RefSeq proteins at NCBI H. sapiens M. musculus D. rerio C. intestinalis S. purpuratus D. melanogaster C. elegans A. thaliana S. cerevisiae E. coli W3110 A. pernix K1 Search summary Figure data Additional searches of RefSeq proteins at NCBI All Eukaryotes Bacteria Archaea Viruses Primates Mammals Vertebrates
Related human proteins: Protein Relative score Description Self-match 1.000 roquin RC3H2 0.427 ring finger and CCCH-type zinc finger domains 2 iso... RC3H2 0.426 ring finger and CCCH-type zinc finger domains 2 iso... FLJ22184 0.019 PREDICTED: hypothetical protein FLJ22184 C6orf132 0.018 PREDICTED: chromosome 6 open reading frame 132 [Hom... C6orf132 0.018 PREDICTED: chromosome 6 open reading frame 132 [Hom... C6orf132 0.018 PREDICTED: hypothetical protein LOC647024 RAPH1 0.017 Ras association and pleckstrin homology domains 1 is... WIPF1 0.016 WAS/WASL interacting protein family, member 1 [Homo... WIPF1 0.016 WAS/WASL interacting protein family, member 1 MLL2 0.016 myeloid/lymphoid or mixed-lineage leukemia 2 BRD4 0.015 bromodomain-containing protein 4 isoform long FLJ22184 0.015 PREDICTED: hypothetical protein LOC80164 SF3A2 0.014 splicing factor 3a, subunit 2 SF1 0.014 splicing factor 1 isoform 1 WIPF2 0.014 WIRE protein FLJ22184 0.014 PREDICTED: hypothetical protein FLJ22184 GLTSCR1 0.014 glioma tumor suppressor candidate region gene 1 [Ho... TTN 0.014 titin isoform N2-A POLR2A 0.013 DNA-directed RNA polymerase II A TFG 0.013 TRK-fused TFG 0.013 TRK-fused SF1 0.013 splicing factor 1 isoform 2 WNK2 0.013 WNK lysine deficient protein kinase 2 KIAA1522 0.013 hypothetical protein LOC57648 BCORL1 0.012 BCL6 co-repressor-like 1 SYNJ1 0.012 synaptojanin 1 isoform c SYNJ1 0.012 synaptojanin 1 isoform d RNASEN 0.012 ribonuclease III, nuclear isoform 2 RNASEN 0.012 ribonuclease III, nuclear isoform 1 Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.