Home |
Table of Contents |
Search text |
Search genes |
Search sequences |
Purchase |
FAQ |
Blog |
Help
Search of human proteins with 71999146
BLASTP 2.2.11 [Jun-05-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= gi|71999146 opsin 5 isoform 2 [Homo sapiens]
(189 letters)
Database: hs.faa
37,866 sequences; 18,247,518 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|71999146 opsin 5 isoform 2 [Homo sapiens] 381 e-106
gi|38678524 opsin 5 isoform 1 [Homo sapiens] 381 e-106
gi|5730019 peropsin [Homo sapiens] 93 1e-19
gi|4506527 rhodopsin [Homo sapiens] 82 2e-16
gi|4502387 opsin 1 (cone pigments), short-wave-sensitive [Homo s... 82 2e-16
gi|71999143 opsin 4 isoform 2 [Homo sapiens] 74 7e-14
gi|15150803 opsin 4 isoform 1 [Homo sapiens] 74 7e-14
gi|71999131 opsin 3 [Homo sapiens] 73 2e-13
gi|114687592 opsin 1 (cone pigments), medium-wave-sensitive 2 [H... 72 2e-13
gi|4503965 opsin 1 (cone pigments), medium-wave-sensitive [Homo ... 72 2e-13
gi|9910526 opsin 1 (cone pigments), long-wave-sensitive [Homo sa... 72 3e-13
gi|61744454 retinal G-protein coupled receptor isoform 2 [Homo s... 57 9e-09
gi|21361329 retinal G-protein coupled receptor isoform 1 [Homo s... 57 9e-09
gi|4557857 somatostatin receptor 1 [Homo sapiens] 52 3e-07
gi|4557859 somatostatin receptor 2 [Homo sapiens] 50 2e-06
gi|149944554 somatostatin receptor 4 [Homo sapiens] 49 3e-06
gi|88758590 G protein-coupled receptor 24 [Homo sapiens] 48 6e-06
gi|167000885 galanin receptor 1 [Homo sapiens] 48 6e-06
gi|4505447 neuropeptide Y receptor Y2 [Homo sapiens] 47 1e-05
gi|197085610 histamine receptor H2 isoform 1 [Homo sapiens] 46 2e-05
gi|13435405 histamine receptor H2 isoform 2 [Homo sapiens] 46 2e-05
gi|110618256 trace amine associated receptor 9 [Homo sapiens] 45 4e-05
gi|4507343 tachykinin receptor 1 isoform long [Homo sapiens] 45 5e-05
gi|4557861 somatostatin receptor 3 [Homo sapiens] 44 6e-05
gi|157426873 tachykinin receptor 2 [Homo sapiens] 44 8e-05
gi|7669546 tachykinin receptor 1 isoform short [Homo sapiens] 43 2e-04
gi|32490567 relaxin 3 receptor 2 [Homo sapiens] 42 4e-04
gi|4557865 somatostatin receptor 5 [Homo sapiens] 41 5e-04
gi|4758474 G protein-coupled receptor 10 [Homo sapiens] 41 5e-04
gi|32483397 dopamine receptor D4 [Homo sapiens] 41 7e-04
>gi|71999146 opsin 5 isoform 2 [Homo sapiens]
Length = 189
Score = 381 bits (979), Expect = e-106
Identities = 189/189 (100%), Positives = 189/189 (100%)
Query: 1 MPLVGLGDYVPEPFGTSCTLDWWLAQASVGGQVFILNILFFCLLLPTAVIVFSYVKIIAK 60
MPLVGLGDYVPEPFGTSCTLDWWLAQASVGGQVFILNILFFCLLLPTAVIVFSYVKIIAK
Sbjct: 1 MPLVGLGDYVPEPFGTSCTLDWWLAQASVGGQVFILNILFFCLLLPTAVIVFSYVKIIAK 60
Query: 61 VKSSSKEVAHFDSRIHSSHVLEMKLTKVAMLICAGFLIAWIPYAVVSVWSAFGRPDSIPI 120
VKSSSKEVAHFDSRIHSSHVLEMKLTKVAMLICAGFLIAWIPYAVVSVWSAFGRPDSIPI
Sbjct: 61 VKSSSKEVAHFDSRIHSSHVLEMKLTKVAMLICAGFLIAWIPYAVVSVWSAFGRPDSIPI 120
Query: 121 QLSVVPTLLAKSAAMYNPIIYQVIDYKFACCQTGGLKATKKKSLEGFRLHTVTTVRKSSA 180
QLSVVPTLLAKSAAMYNPIIYQVIDYKFACCQTGGLKATKKKSLEGFRLHTVTTVRKSSA
Sbjct: 121 QLSVVPTLLAKSAAMYNPIIYQVIDYKFACCQTGGLKATKKKSLEGFRLHTVTTVRKSSA 180
Query: 181 VLEIHEEWE 189
VLEIHEEWE
Sbjct: 181 VLEIHEEWE 189
>gi|38678524 opsin 5 isoform 1 [Homo sapiens]
Length = 354
Score = 381 bits (979), Expect = e-106
Identities = 189/189 (100%), Positives = 189/189 (100%)
Query: 1 MPLVGLGDYVPEPFGTSCTLDWWLAQASVGGQVFILNILFFCLLLPTAVIVFSYVKIIAK 60
MPLVGLGDYVPEPFGTSCTLDWWLAQASVGGQVFILNILFFCLLLPTAVIVFSYVKIIAK
Sbjct: 166 MPLVGLGDYVPEPFGTSCTLDWWLAQASVGGQVFILNILFFCLLLPTAVIVFSYVKIIAK 225
Query: 61 VKSSSKEVAHFDSRIHSSHVLEMKLTKVAMLICAGFLIAWIPYAVVSVWSAFGRPDSIPI 120
VKSSSKEVAHFDSRIHSSHVLEMKLTKVAMLICAGFLIAWIPYAVVSVWSAFGRPDSIPI
Sbjct: 226 VKSSSKEVAHFDSRIHSSHVLEMKLTKVAMLICAGFLIAWIPYAVVSVWSAFGRPDSIPI 285
Query: 121 QLSVVPTLLAKSAAMYNPIIYQVIDYKFACCQTGGLKATKKKSLEGFRLHTVTTVRKSSA 180
QLSVVPTLLAKSAAMYNPIIYQVIDYKFACCQTGGLKATKKKSLEGFRLHTVTTVRKSSA
Sbjct: 286 QLSVVPTLLAKSAAMYNPIIYQVIDYKFACCQTGGLKATKKKSLEGFRLHTVTTVRKSSA 345
Query: 181 VLEIHEEWE 189
VLEIHEEWE
Sbjct: 346 VLEIHEEWE 354
>gi|5730019 peropsin [Homo sapiens]
Length = 337
Score = 93.2 bits (230), Expect = 1e-19
Identities = 42/148 (28%), Positives = 82/148 (55%), Gaps = 4/148 (2%)
Query: 1 MPLVGLGDYVPEPFGTSCTLDWWLAQASVGGQVFILNILFFCLLLPTAVIVFSYVKIIAK 60
MP++G Y P+P G +CT++W S + + ++ ++P V+ + Y +
Sbjct: 158 MPIIGWASYAPDPTGATCTINWRKNDRSFVS--YTMTVIAINFIVPLTVMFYCYYHVTLS 215
Query: 61 VKSSSKEVAHFDSRIHSSHVLEMKLTKVAMLICAGFLIAWIPYAVVSVWSAFGRPDSIPI 120
+K + + ++ ++ +TK+++++ FL+AW PY++V +W++FG P IP
Sbjct: 216 IKHHT--TSDCTESLNRDWSDQIDVTKMSVIMICMFLVAWSPYSIVCLWASFGDPKKIPP 273
Query: 121 QLSVVPTLLAKSAAMYNPIIYQVIDYKF 148
++++ L AKS+ YNP IY V + KF
Sbjct: 274 PMAIIAPLFAKSSTFYNPCIYVVANKKF 301
>gi|4506527 rhodopsin [Homo sapiens]
Length = 348
Score = 82.4 bits (202), Expect = 2e-16
Identities = 42/150 (28%), Positives = 77/150 (51%), Gaps = 4/150 (2%)
Query: 2 PLVGLGDYVPEPFGTSCTLDWWLAQASVGGQVFILNILFFCLLLPTAVIVFSYVKIIAKV 61
PL G Y+PE SC +D++ + V + F++ + +P +I F Y +++ V
Sbjct: 171 PLAGWSRYIPEGLQCSCGIDYYTLKPEVNNESFVIYMFVVHFTIPMIIIFFCYGQLVFTV 230
Query: 62 KSSSKEVAHFDSRIHSSHVLEMKLTKVAMLICAGFLIAWIPYAVVSVWSAFGRPDSIPIQ 121
KE A ++ E ++T++ +++ FLI W+PYA V+ + + +
Sbjct: 231 ----KEAAAQQQESATTQKAEKEVTRMVIIMVIAFLICWVPYASVAFYIFTHQGSNFGPI 286
Query: 122 LSVVPTLLAKSAAMYNPIIYQVIDYKFACC 151
+P AKSAA+YNP+IY +++ +F C
Sbjct: 287 FMTIPAFFAKSAAIYNPVIYIMMNKQFRNC 316
>gi|4502387 opsin 1 (cone pigments), short-wave-sensitive [Homo
sapiens]
Length = 348
Score = 82.4 bits (202), Expect = 2e-16
Identities = 37/150 (24%), Positives = 78/150 (52%), Gaps = 4/150 (2%)
Query: 2 PLVGLGDYVPEPFGTSCTLDWWLAQASVGGQVFILNILFFCLLLPTAVIVFSYVKIIAKV 61
P G ++PE SC DW+ + + + FC ++P ++I FSY +++ +
Sbjct: 168 PFFGWSRFIPEGLQCSCGPDWYTVGTKYRSESYTWFLFIFCFIVPLSLICFSYTQLLRAL 227
Query: 62 KSSSKEVAHFDSRIHSSHVLEMKLTKVAMLICAGFLIAWIPYAVVSVWSAFGRPDSIPIQ 121
K+ VA ++ E +++++ +++ F + ++PYA +++ R + ++
Sbjct: 228 KA----VAAQQQESATTQKAEREVSRMVVVMVGSFCVCYVPYAAFAMYMVNNRNHGLDLR 283
Query: 122 LSVVPTLLAKSAAMYNPIIYQVIDYKFACC 151
L +P+ +KSA +YNPIIY ++ +F C
Sbjct: 284 LVTIPSFFSKSACIYNPIIYCFMNKQFQAC 313
>gi|71999143 opsin 4 isoform 2 [Homo sapiens]
Length = 489
Score = 73.9 bits (180), Expect = 7e-14
Identities = 41/155 (26%), Positives = 80/155 (51%), Gaps = 10/155 (6%)
Query: 2 PLVGLGDYVPEPFGTSCTLDWWLAQASVGGQVFILNILFFCLLLPTAVIVFSYVKIIAKV 61
P G YVPE TSC+ D+ +V + + + + F LP +I++ Y+ I +
Sbjct: 216 PFFGWSAYVPEGLLTSCSWDYMSFTPAV--RAYTMLLCCFVFFLPLLIIIYCYIFIFRAI 273
Query: 62 KSSSKEVAHFDSRIHSSHVL--------EMKLTKVAMLICAGFLIAWIPYAVVSVWSAFG 113
+ + + + F + + L E K+ K+ +L+ F+++W PY+ V++ + G
Sbjct: 274 RETGRALQTFGACKGNGESLWQRQRLQSECKMAKIMLLVILLFVLSWAPYSAVALVAFAG 333
Query: 114 RPDSIPIQLSVVPTLLAKSAAMYNPIIYQVIDYKF 148
+ +S VP ++AK++A++NPIIY + K+
Sbjct: 334 YAHVLTPYMSSVPAVIAKASAIHNPIIYAITHPKY 368
>gi|15150803 opsin 4 isoform 1 [Homo sapiens]
Length = 478
Score = 73.9 bits (180), Expect = 7e-14
Identities = 41/155 (26%), Positives = 80/155 (51%), Gaps = 10/155 (6%)
Query: 2 PLVGLGDYVPEPFGTSCTLDWWLAQASVGGQVFILNILFFCLLLPTAVIVFSYVKIIAKV 61
P G YVPE TSC+ D+ +V + + + + F LP +I++ Y+ I +
Sbjct: 205 PFFGWSAYVPEGLLTSCSWDYMSFTPAV--RAYTMLLCCFVFFLPLLIIIYCYIFIFRAI 262
Query: 62 KSSSKEVAHFDSRIHSSHVL--------EMKLTKVAMLICAGFLIAWIPYAVVSVWSAFG 113
+ + + + F + + L E K+ K+ +L+ F+++W PY+ V++ + G
Sbjct: 263 RETGRALQTFGACKGNGESLWQRQRLQSECKMAKIMLLVILLFVLSWAPYSAVALVAFAG 322
Query: 114 RPDSIPIQLSVVPTLLAKSAAMYNPIIYQVIDYKF 148
+ +S VP ++AK++A++NPIIY + K+
Sbjct: 323 YAHVLTPYMSSVPAVIAKASAIHNPIIYAITHPKY 357
>gi|71999131 opsin 3 [Homo sapiens]
Length = 402
Score = 72.8 bits (177), Expect = 2e-13
Identities = 44/147 (29%), Positives = 69/147 (46%), Gaps = 2/147 (1%)
Query: 2 PLVGLGDYVPEPFGTSCTLDWWLAQASVGGQVFILNILFFCLLLPTAVIVFSYVKIIAKV 61
PL+G Y+ + G CT+DW A+ F+L + CL++P VI Y I+ +
Sbjct: 172 PLLGWNRYILDVHGLGCTVDWKSKDANDSS--FVLFLFLGCLVVPLGVIAHCYGHILYSI 229
Query: 62 KSSSKEVAHFDSRIHSSHVLEMKLTKVAMLICAGFLIAWIPYAVVSVWSAFGRPDSIPIQ 121
+ ++ E KL K+ L+ FL+ W+PY V+ G +
Sbjct: 230 RMLRCVEDLQTIQVIKILKYEKKLAKMCFLMIFTFLVCWMPYIVICFLVVNGHGHLVTPT 289
Query: 122 LSVVPTLLAKSAAMYNPIIYQVIDYKF 148
+S+V L AKS +YNP+IY + KF
Sbjct: 290 ISIVSYLFAKSNTVYNPVIYVFMIRKF 316
>gi|114687592 opsin 1 (cone pigments), medium-wave-sensitive 2 [Homo
sapiens]
Length = 364
Score = 72.4 bits (176), Expect = 2e-13
Identities = 44/178 (24%), Positives = 86/178 (48%), Gaps = 7/178 (3%)
Query: 2 PLVGLGDYVPEPFGTSCTLDWWLAQASVGGQVFILNILFFCLLLPTAVIVFSYVKIIAKV 61
P+ G Y P TSC D + + G Q +++ ++ C + P ++IV Y+++ +
Sbjct: 187 PIFGWSRYWPHGLKTSCGPDVFSGSSYPGVQSYMIVLMVTCCITPLSIIVLCYLQVWLAI 246
Query: 62 KSSSKEVAHFDSRIHSSHVLEMKLTKVAMLICAGFLIAWIPYAVVSVWSAFGRPDSIPIQ 121
++ +K+ S+ E ++T++ +++ F W PYA + ++A
Sbjct: 247 RAVAKQ----QKESESTQKAEKEVTRMVVVMVLAFCFCWGPYAFFACFAAANPGYPFHPL 302
Query: 122 LSVVPTLLAKSAAMYNPIIYQVIDYKFACCQTGGLKATKKKSLEGFRLHTVTTVRKSS 179
++ +P AKSA +YNP+IY ++ +F C L+ KK +G L + + SS
Sbjct: 303 MAALPAFFAKSATIYNPVIYVFMNRQFRNCI---LQLFGKKVDDGSELSSASKTEVSS 357
>gi|4503965 opsin 1 (cone pigments), medium-wave-sensitive [Homo
sapiens]
Length = 364
Score = 72.4 bits (176), Expect = 2e-13
Identities = 44/178 (24%), Positives = 86/178 (48%), Gaps = 7/178 (3%)
Query: 2 PLVGLGDYVPEPFGTSCTLDWWLAQASVGGQVFILNILFFCLLLPTAVIVFSYVKIIAKV 61
P+ G Y P TSC D + + G Q +++ ++ C + P ++IV Y+++ +
Sbjct: 187 PIFGWSRYWPHGLKTSCGPDVFSGSSYPGVQSYMIVLMVTCCITPLSIIVLCYLQVWLAI 246
Query: 62 KSSSKEVAHFDSRIHSSHVLEMKLTKVAMLICAGFLIAWIPYAVVSVWSAFGRPDSIPIQ 121
++ +K+ S+ E ++T++ +++ F W PYA + ++A
Sbjct: 247 RAVAKQ----QKESESTQKAEKEVTRMVVVMVLAFCFCWGPYAFFACFAAANPGYPFHPL 302
Query: 122 LSVVPTLLAKSAAMYNPIIYQVIDYKFACCQTGGLKATKKKSLEGFRLHTVTTVRKSS 179
++ +P AKSA +YNP+IY ++ +F C L+ KK +G L + + SS
Sbjct: 303 MAALPAFFAKSATIYNPVIYVFMNRQFRNCI---LQLFGKKVDDGSELSSASKTEVSS 357
>gi|9910526 opsin 1 (cone pigments), long-wave-sensitive [Homo
sapiens]
Length = 364
Score = 72.0 bits (175), Expect = 3e-13
Identities = 42/178 (23%), Positives = 88/178 (49%), Gaps = 7/178 (3%)
Query: 2 PLVGLGDYVPEPFGTSCTLDWWLAQASVGGQVFILNILFFCLLLPTAVIVFSYVKIIAKV 61
P+ G Y P TSC D + + G Q +++ ++ C ++P A+I+ Y+++ +
Sbjct: 187 PIFGWSRYWPHGLKTSCGPDVFSGSSYPGVQSYMIVLMVTCCIIPLAIIMLCYLQVWLAI 246
Query: 62 KSSSKEVAHFDSRIHSSHVLEMKLTKVAMLICAGFLIAWIPYAVVSVWSAFGRPDSIPIQ 121
++ +K+ S+ E ++T++ +++ + + W PY + ++A +
Sbjct: 247 RAVAKQ----QKESESTQKAEKEVTRMVVVMIFAYCVCWGPYTFFACFAAANPGYAFHPL 302
Query: 122 LSVVPTLLAKSAAMYNPIIYQVIDYKFACCQTGGLKATKKKSLEGFRLHTVTTVRKSS 179
++ +P AKSA +YNP+IY ++ +F C L+ KK +G L + + SS
Sbjct: 303 MAALPAYFAKSATIYNPVIYVFMNRQFRNCI---LQLFGKKVDDGSELSSASKTEVSS 357
>gi|61744454 retinal G-protein coupled receptor isoform 2 [Homo
sapiens]
Length = 291
Score = 57.0 bits (136), Expect = 9e-09
Identities = 39/141 (27%), Positives = 65/141 (46%), Gaps = 20/141 (14%)
Query: 1 MPLVGLGDYVPEPFGTSCTLDWWLAQASVGGQVFILNILFFCLLLPTAVIVFSYVKIIAK 60
+PL+G G Y EP GT CTLD+ ++ F+ + FF +P + + SY
Sbjct: 145 LPLLGWGHYDYEPLGTCCTLDY--SKGDRNFTSFLFTMSFFNFAMPLFITITSY------ 196
Query: 61 VKSSSKEVAHFDSRIHSSHVLEMKLTKVAMLICAGFLIAWIPYAVVSVWSAFGRPDSIPI 120
+ + ++ S L++ T A + L+ W PYA++ +++ SI
Sbjct: 197 --------SLMEQKLGKSGHLQVNTTLPARTL----LLGWGPYAILYLYAVIADVTSISP 244
Query: 121 QLSVVPTLLAKSAAMYNPIIY 141
+L +VP L+AK N I Y
Sbjct: 245 KLQMVPALIAKMVPTINAINY 265
>gi|21361329 retinal G-protein coupled receptor isoform 1 [Homo
sapiens]
Length = 295
Score = 57.0 bits (136), Expect = 9e-09
Identities = 39/141 (27%), Positives = 65/141 (46%), Gaps = 20/141 (14%)
Query: 1 MPLVGLGDYVPEPFGTSCTLDWWLAQASVGGQVFILNILFFCLLLPTAVIVFSYVKIIAK 60
+PL+G G Y EP GT CTLD+ ++ F+ + FF +P + + SY
Sbjct: 149 LPLLGWGHYDYEPLGTCCTLDY--SKGDRNFTSFLFTMSFFNFAMPLFITITSY------ 200
Query: 61 VKSSSKEVAHFDSRIHSSHVLEMKLTKVAMLICAGFLIAWIPYAVVSVWSAFGRPDSIPI 120
+ + ++ S L++ T A + L+ W PYA++ +++ SI
Sbjct: 201 --------SLMEQKLGKSGHLQVNTTLPARTL----LLGWGPYAILYLYAVIADVTSISP 248
Query: 121 QLSVVPTLLAKSAAMYNPIIY 141
+L +VP L+AK N I Y
Sbjct: 249 KLQMVPALIAKMVPTINAINY 269
>gi|4557857 somatostatin receptor 1 [Homo sapiens]
Length = 391
Score = 52.0 bits (123), Expect = 3e-07
Identities = 37/116 (31%), Positives = 58/116 (50%), Gaps = 9/116 (7%)
Query: 34 FILNILFFCLLLPTAVIVFSYVKIIAKVKSSSKEVAHFDSRIHSSHVLEMKLTKVAMLIC 93
F+L LLP I YV IIAK++ + + A + R S E K+T + M++
Sbjct: 223 FVLYTFLMGFLLPVGAICLCYVLIIAKMRMVALK-AGWQQRKRS----ERKITLMVMMVV 277
Query: 94 AGFLIAWIPYAVVSVWSAFGRPDSIPI-QLSVVPTLLAKSAAMYNPIIYQVIDYKF 148
F+I W+P+ VV + + F D + QLSV+ L + + NPI+Y + F
Sbjct: 278 MVFVICWMPFYVVQLVNVFAEQDDATVSQLSVI---LGYANSCANPILYGFLSDNF 330
>gi|4557859 somatostatin receptor 2 [Homo sapiens]
Length = 369
Score = 49.7 bits (117), Expect = 2e-06
Identities = 38/142 (26%), Positives = 65/142 (45%), Gaps = 22/142 (15%)
Query: 16 TSCTLDWWLAQASVGGQVFILNILFFCLLLPTAVIVFSYVKIIAKVKSSSKEVAHFDSRI 75
+SCT++W ++ FI+ L+P +I Y+ II KVKSS V S+
Sbjct: 191 SSCTINW-PGESGAWYTGFIIYTFILGFLVPLTIICLCYLFIIIKVKSSGIRVG--SSKR 247
Query: 76 HSSHVLEMKLTKVAMLICAGFLIAWIPYAVVSVWSAFGRPDSIPIQLSVVPTL------- 128
S E K+T++ ++ A F+ W+P+ + +V S+ + +S P L
Sbjct: 248 KKS---EKKVTRMVSIVVAVFIFCWLPFYIFNV-------SSVSMAISPTPALKGMFDFV 297
Query: 129 --LAKSAAMYNPIIYQVIDYKF 148
L + + NPI+Y + F
Sbjct: 298 VVLTYANSCANPILYAFLSDNF 319
>gi|149944554 somatostatin receptor 4 [Homo sapiens]
Length = 388
Score = 48.5 bits (114), Expect = 3e-06
Identities = 42/181 (23%), Positives = 79/181 (43%), Gaps = 30/181 (16%)
Query: 1 MPLVGLGDYVPEPFG--TSCTLDW----WLAQASVGGQVFILNILFFCLLLPTAVIVFSY 54
+P+ D P G +C L W W A VF++ LLP I Y
Sbjct: 179 LPIAIFADTRPARGGQAVACNLQWPHPAWSA-------VFVVYTFLLGFLLPVLAIGLCY 231
Query: 55 VKIIAKVKSSSKEVAHFDSRIHSSHVLEMKLTKVAMLICAGFLIAWIPYAVVSVWSAFGR 114
+ I+ K+++ + A + R S E K+T++ +++ F++ W+P+ VV + + F
Sbjct: 232 LLIVGKMRAVALR-AGWQQRRRS----EKKITRLVLMVVVVFVLCWMPFYVVQLLNLF-- 284
Query: 115 PDSIPIQLSVVPTLLAKSAAMYNPIIYQVIDYKF----------ACCQTGGLKATKKKSL 164
S+ ++ V +L+ + + NPI+Y + F CC G +++ L
Sbjct: 285 VTSLDATVNHVSLILSYANSCANPILYGFLSDNFRRFFQRVLCLRCCLLEGAGGAEEEPL 344
Query: 165 E 165
+
Sbjct: 345 D 345
>gi|88758590 G protein-coupled receptor 24 [Homo sapiens]
Length = 422
Score = 47.8 bits (112), Expect = 6e-06
Identities = 31/112 (27%), Positives = 50/112 (44%), Gaps = 6/112 (5%)
Query: 34 FILNILFFCLLLPTAVIVFSYVKIIAKVKSSSKEVAHFDSRIHSSHVLEMKLTKVAMLIC 93
F L F LP VI +YV+I+ ++ SS + R+ + V T+ A+ IC
Sbjct: 277 FTLYQFFLAFALPFVVITAAYVRILQRMTSSVAPASQRSIRLRTKRV-----TRTAIAIC 331
Query: 94 AGFLIAWIPYAVVSVWS-AFGRPDSIPIQLSVVPTLLAKSAAMYNPIIYQVI 144
F + W PY V+ + + RP + L L + + NP +Y V+
Sbjct: 332 LVFFVCWAPYYVLQLTQLSISRPTLTFVYLYNAAISLGYANSCLNPFVYIVL 383
>gi|167000885 galanin receptor 1 [Homo sapiens]
Length = 349
Score = 47.8 bits (112), Expect = 6e-06
Identities = 28/119 (23%), Positives = 53/119 (44%), Gaps = 8/119 (6%)
Query: 32 QVFILNILFFCLLLPTAVIVFSYVKIIAKVKSSSKEVAHFDSRIHSSHVLEMKLTKVAML 91
+ +++ F LLP +I F Y K++ + K ++ S + K + ++
Sbjct: 198 KAYVVCTFVFGYLLPLLLICFCYAKVLNHLHKKLKNMSK------KSEASKKKTAQTVLV 251
Query: 92 ICAGFLIAWIPYAVVSVWSAFGRPDSIPIQ--LSVVPTLLAKSAAMYNPIIYQVIDYKF 148
+ F I+W+P+ ++ +W+ FG P + LA S + NPIIY + F
Sbjct: 252 VVVVFGISWLPHHIIHLWAEFGVFPLTPASFLFRITAHCLAYSNSSVNPIIYAFLSENF 310
>gi|4505447 neuropeptide Y receptor Y2 [Homo sapiens]
Length = 381
Score = 47.0 bits (110), Expect = 1e-05
Identities = 27/95 (28%), Positives = 47/95 (49%), Gaps = 4/95 (4%)
Query: 8 DYVPEPFGTSCTLDWWLAQASVGGQVFILNILFFCLLLPTAVIVFSYVKIIAKVKSSSKE 67
+ +P+ +CT W + S+ G V+ L+ L +LP +I FSY +I +K+K+
Sbjct: 193 EIIPDFEIVACTEKWPGEEKSIYGTVYSLSSLLILYVLPLGIISFSYTRIWSKLKNHVSP 252
Query: 68 VAHFDSRIHSSHVLEMKLTKVAMLICAGFLIAWIP 102
A D H K TK+ + + F ++W+P
Sbjct: 253 GAAND----HYHQRRQKTTKMLVCVVVVFAVSWLP 283
>gi|197085610 histamine receptor H2 isoform 1 [Homo sapiens]
Length = 397
Score = 46.2 bits (108), Expect = 2e-05
Identities = 28/123 (22%), Positives = 50/123 (40%), Gaps = 8/123 (6%)
Query: 45 LPTAVIVFSYVKIIAKVKSSSKEVAHFDSRIHSSHVLEMKLTKVAMLICAGFLIAWIPYA 104
LP ++ +Y +I + +K + H S ++ + E K T + F+I W PY
Sbjct: 193 LPLLIMCITYYRIFKVARDQAKRINHISSW-KAATIREHKATVTLAAVMGAFIICWFPYF 251
Query: 105 VVSVWSAFGRPDSIPIQLSVVPTLLAKSAAMYNPIIYQVIDYKFA-------CCQTGGLK 157
V+ D+I L + L + + NPI+Y ++ F CC+
Sbjct: 252 TAFVYRGLRGDDAINEVLEAIVLWLGYANSALNPILYAALNRDFRTGYQQLFCCRLANRN 311
Query: 158 ATK 160
+ K
Sbjct: 312 SHK 314
>gi|13435405 histamine receptor H2 isoform 2 [Homo sapiens]
Length = 359
Score = 46.2 bits (108), Expect = 2e-05
Identities = 28/123 (22%), Positives = 50/123 (40%), Gaps = 8/123 (6%)
Query: 45 LPTAVIVFSYVKIIAKVKSSSKEVAHFDSRIHSSHVLEMKLTKVAMLICAGFLIAWIPYA 104
LP ++ +Y +I + +K + H S ++ + E K T + F+I W PY
Sbjct: 193 LPLLIMCITYYRIFKVARDQAKRINHISSW-KAATIREHKATVTLAAVMGAFIICWFPYF 251
Query: 105 VVSVWSAFGRPDSIPIQLSVVPTLLAKSAAMYNPIIYQVIDYKFA-------CCQTGGLK 157
V+ D+I L + L + + NPI+Y ++ F CC+
Sbjct: 252 TAFVYRGLRGDDAINEVLEAIVLWLGYANSALNPILYAALNRDFRTGYQQLFCCRLANRN 311
Query: 158 ATK 160
+ K
Sbjct: 312 SHK 314
>gi|110618256 trace amine associated receptor 9 [Homo sapiens]
Length = 348
Score = 45.1 bits (105), Expect = 4e-05
Identities = 36/131 (27%), Positives = 58/131 (44%), Gaps = 14/131 (10%)
Query: 24 LAQASVGGQVFILN-----ILFFCLLLPTAVIVFSYVKIIAKVKSSSKEVAHFDSRIHSS 78
+A VGG LN + F +P +VF Y KI K ++++ S+ SS
Sbjct: 182 VALTCVGGCQAPLNQNWVLLCFLLFFIPNVAMVFIYSKIFLVAKHQARKIESTASQAQSS 241
Query: 79 HVL--------EMKLTKVAMLICAGFLIAWIPYAVVSVWSAFGRPDSIPIQLSVVPTLLA 130
E K K + A FL++W+PY V +V A+ + P ++ +
Sbjct: 242 SESYKERVAKRERKAAKTLGIAMAAFLVSWLPYLVDAVIDAYMNFITPPYVYEILVWCVY 301
Query: 131 KSAAMYNPIIY 141
++AM NP+IY
Sbjct: 302 YNSAM-NPLIY 311
>gi|4507343 tachykinin receptor 1 isoform long [Homo sapiens]
Length = 407
Score = 44.7 bits (104), Expect = 5e-05
Identities = 43/195 (22%), Positives = 79/195 (40%), Gaps = 22/195 (11%)
Query: 13 PFGTSCTLDWWLAQASVGGQVFILNILFFCLLLPTAVIVFSYVKIIAKVKSSSKEVAHFD 72
P C ++W + +V+ + + LP VI ++Y ++ +S+
Sbjct: 175 PSRVVCMIEWPEHPNKIYEKVYHICVTVLIYFLPLLVIGYAYT-VVGITLWASEIPGDSS 233
Query: 73 SRIHSSHVLEMKLTKVAMLICAGFLIAWIPYAVVSVWSAFGRPD----SIPIQLSVVPTL 128
R H + K+ K+ +++ F I W+P+ + + + PD Q+ +
Sbjct: 234 DRYHEQVSAKRKVVKMMIVVVCTFAICWLPFHIFFLLP-YINPDLYLKKFIQQVYLAIMW 292
Query: 129 LAKSAAMYNPIIYQVID--------YKFACCQ--TGG------LKATKKKSLEGFRLHTV 172
LA S+ MYNPIIY ++ + F CC + G +K+T+ +G
Sbjct: 293 LAMSSTMYNPIIYCCLNDRFRLGFKHAFRCCPFISAGDYEGLEMKSTRYLQTQGSVYKVS 352
Query: 173 TTVRKSSAVLEIHEE 187
S V+ HEE
Sbjct: 353 RLETTISTVVGAHEE 367
>gi|4557861 somatostatin receptor 3 [Homo sapiens]
Length = 418
Score = 44.3 bits (103), Expect = 6e-05
Identities = 35/140 (25%), Positives = 61/140 (43%), Gaps = 8/140 (5%)
Query: 13 PFGTSCTLDWWLAQASVGGQVFILNILFFCLLLPTAVIVFSYVKIIAKVKSSSKEVAHFD 72
P G S W A+ FI+ P VI Y+ I+ KV+S+ + V +
Sbjct: 185 PRGMSTCHMQWPEPAAAWRAGFIIYTAALGFFGPLLVICLCYLLIVVKVRSAGRRV--WA 242
Query: 73 SRIHSSHVLEMKLTKVAMLICAGFLIAWIPYAVVSVWSAF----GRPDSIPIQLSVVPTL 128
E ++T++ + + A F++ W+P+ V+++ + P + VV
Sbjct: 243 PSCQRRRRSERRVTRMVVAVVALFVLCWMPFYVLNIVNVVCPLPEEPAFFGLYFLVVALP 302
Query: 129 LAKSAAMYNPIIYQVIDYKF 148
A S A NPI+Y + Y+F
Sbjct: 303 YANSCA--NPILYGFLSYRF 320
>gi|157426873 tachykinin receptor 2 [Homo sapiens]
Length = 398
Score = 43.9 bits (102), Expect = 8e-05
Identities = 36/139 (25%), Positives = 62/139 (44%), Gaps = 9/139 (6%)
Query: 16 TSCTLDWWLAQASVGGQVFILNILFFCLL--LPTAVIVFSYVKIIAKVKSSSKEVAHFDS 73
T C + W + S G + + +++ L+ LP AV+ +Y +I H
Sbjct: 179 TKCVVAW--PEDSGGKTLLLYHLVVIALIYFLPLAVMFVAY-SVIGLTLWRRAVPGHQAH 235
Query: 74 RIHSSHVLEMK-LTKVAMLICAGFLIAWIPYAVVSVWSAFGRP---DSIPIQLSVVPTLL 129
+ H+ MK K +L+ F I W+PY + + +F Q+ + L
Sbjct: 236 GANLRHLQAMKKFVKTMVLVVLTFAICWLPYHLYFILGSFQEDIYCHKFIQQVYLALFWL 295
Query: 130 AKSAAMYNPIIYQVIDYKF 148
A S+ MYNPIIY ++++F
Sbjct: 296 AMSSTMYNPIIYCCLNHRF 314
>gi|7669546 tachykinin receptor 1 isoform short [Homo sapiens]
Length = 311
Score = 42.7 bits (99), Expect = 2e-04
Identities = 31/133 (23%), Positives = 58/133 (43%), Gaps = 6/133 (4%)
Query: 13 PFGTSCTLDWWLAQASVGGQVFILNILFFCLLLPTAVIVFSYVKIIAKVKSSSKEVAHFD 72
P C ++W + +V+ + + LP VI ++Y ++ +S+
Sbjct: 175 PSRVVCMIEWPEHPNKIYEKVYHICVTVLIYFLPLLVIGYAYT-VVGITLWASEIPGDSS 233
Query: 73 SRIHSSHVLEMKLTKVAMLICAGFLIAWIPYAVVSVWSAFGRPD----SIPIQLSVVPTL 128
R H + K+ K+ +++ F I W+P+ + + + PD Q+ +
Sbjct: 234 DRYHEQVSAKRKVVKMMIVVVCTFAICWLPFHIFFL-LPYINPDLYLKKFIQQVYLAIMW 292
Query: 129 LAKSAAMYNPIIY 141
LA S+ MYNPIIY
Sbjct: 293 LAMSSTMYNPIIY 305
>gi|32490567 relaxin 3 receptor 2 [Homo sapiens]
Length = 374
Score = 41.6 bits (96), Expect = 4e-04
Identities = 30/115 (26%), Positives = 52/115 (45%), Gaps = 20/115 (17%)
Query: 36 LNILFFCLLLPTAVIVFSYVKIIAKVKSSSKEVAHFDSRIHSSHVLEMKLTKVAMLICAG 95
L + ++P VI SY+ ++A ++ + DSR+ + + ++ A
Sbjct: 206 LQRVVLAFMVPLGVITTSYLLLLAFLQRRQRR--RQDSRV---------VARSVRILVAS 254
Query: 96 FLIAWIPYAVVSVWSAFGRPDSIP-------IQLSVVP--TLLAKSAAMYNPIIY 141
F + W P VV++W + D +P IQ V P T LA S + NP++Y
Sbjct: 255 FFLCWFPNHVVTLWGVLVKFDLVPWNSTFYTIQTYVFPVTTCLAHSNSCLNPVLY 309
>gi|4557865 somatostatin receptor 5 [Homo sapiens]
Length = 364
Score = 41.2 bits (95), Expect = 5e-04
Identities = 34/138 (24%), Positives = 57/138 (41%), Gaps = 13/138 (9%)
Query: 15 GTSCTLDWWLAQASVGGQVFILNILFFCLLLPTAVIVFSYVKIIAKVKSSSKEVAHFDSR 74
G +C W + G VFI+ P VI Y+ I+ KV+++ V R
Sbjct: 183 GGTCNASW-PEPVGLWGAVFIIYTAVLGFFAPLLVICLCYLLIVVKVRAAGVRVGCVRRR 241
Query: 75 IHSSHVLEMKLTKVAMLICAGFLIAWIPYAVVSVWSAF----GRPDSIPIQLSVVPTLLA 130
E K+T++ +++ F W+P+ V++ + P S + VV A
Sbjct: 242 ------SERKVTRMVLVVVLVFAGCWLPFFTVNIVNLAVALPQEPASAGLYFFVVILSYA 295
Query: 131 KSAAMYNPIIYQVIDYKF 148
S A NP++Y + F
Sbjct: 296 NSCA--NPVLYGFLSDNF 311
>gi|4758474 G protein-coupled receptor 10 [Homo sapiens]
Length = 370
Score = 41.2 bits (95), Expect = 5e-04
Identities = 28/113 (24%), Positives = 49/113 (43%), Gaps = 3/113 (2%)
Query: 32 QVFILNILFFCLLLPTAVIVFSYVKIIAKVKSSSKEVAHFDSRIHSSHVLEMKLTKVAML 91
Q++ +L LLP VI+ SYV++ K+++ S+ + + ++
Sbjct: 223 QLYAWGLLLVTYLLPLLVILLSYVRVSVKLRNRVVPGCVTQSQADWDRARRRRTFCLLVV 282
Query: 92 ICAGFLIAWIPYAVVSVWSAFGRPDSIPIQLSVVPTL---LAKSAAMYNPIIY 141
+ F + W+P V ++ P +V L LA S+A YNP IY
Sbjct: 283 VVVVFAVCWLPLHVFNLLRDLDPHAIDPYAFGLVQLLCHWLAMSSACYNPFIY 335
>gi|32483397 dopamine receptor D4 [Homo sapiens]
Length = 419
Score = 40.8 bits (94), Expect = 7e-04
Identities = 24/79 (30%), Positives = 36/79 (45%), Gaps = 9/79 (11%)
Query: 82 EMKLTKVAMLICAGFLIAWIPYAVVSVWSAFGRPDSIPIQLSVVPTLLAKSAAMYNPIIY 141
E K +V ++ FL+ W P+ VV + A S+P +L T L + NP+IY
Sbjct: 341 ERKAMRVLPVVVGAFLLCWTPFFVVHITQALCPACSVPPRLVSAVTWLGYVNSALNPVIY 400
Query: 142 QVIDYKF---------ACC 151
V + +F ACC
Sbjct: 401 TVFNAEFRNVFRKALRACC 419
Database: hs.faa
Posted date: Aug 4, 2009 4:42 PM
Number of letters in database: 18,247,518
Number of sequences in database: 37,866
Lambda K H
0.325 0.137 0.427
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 6,596,174
Number of Sequences: 37866
Number of extensions: 244460
Number of successful extensions: 966
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 69
Number of HSP's successfully gapped in prelim test: 112
Number of HSP's that attempted gapping in prelim test: 831
Number of HSP's gapped (non-prelim): 182
length of query: 189
length of database: 18,247,518
effective HSP length: 96
effective length of query: 93
effective length of database: 14,612,382
effective search space: 1358951526
effective search space used: 1358951526
T: 11
A: 40
X1: 15 ( 7.0 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 40 (21.6 bits)
S2: 59 (27.3 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
Home |
Table of Contents |
Search text |
Search genes |
Search sequences |
Purchase |
FAQ |
Blog |
Help
Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.