Guide to the Human Genome
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Name: SSTR4 Sequence: fasta or formatted (388aa) NCBI GI: 149944554
Description:

somatostatin receptor 4

Referenced in:

Growth Hormone and Related Hormones
Peptide and Protein G-coupled Signals

Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine            12.6         49           2
 C cysteine            3.6         14           2
 D aspartate           2.1          8           1
 E glutamate           3.4         13           3
 F phenylalanine       4.6         18           2
 G glycine             6.7         26           2
 H histidine           1.0          4           1
 I isoleucine          3.6         14           1
 K lysine              2.3          9           2
 L leucine            14.2         55           2
 M methionine          2.3          9           1
 N asparagine          3.1         12           1
 P proline             6.2         24           2
 Q glutamine           2.6         10           2
 R arginine            5.9         23           3
 S serine              5.7         22           2
 T threonine           4.6         18           3
 V valine             10.6         41           4
 W tryptophan          1.8          7           1
 Y tyrosine            3.1         12           2
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   somatostatin receptor 4 
SSTR1                 0.547   somatostatin receptor 1 
SSTR5                 0.422   somatostatin receptor 5 
SSTR2                 0.405   somatostatin receptor 2 
SSTR3                 0.382   somatostatin receptor 3 
OPRD1                 0.333   opioid receptor, delta 1 
OPRK1                 0.309   opioid receptor, kappa 1 
OPRM1                 0.308   opioid receptor, mu 1 isoform MOR-1X 
OPRM1                 0.306   opioid receptor, mu 1 isoform MOR-1H 
OPRM1                 0.306   opioid receptor, mu 1 isoform MOR-1 
OPRM1                 0.306   opioid receptor, mu 1 isoform MOR-1B5 
OPRM1                 0.306   opioid receptor, mu 1 isoform MOR-1B2 
OPRM1                 0.306   opioid receptor, mu 1 isoform MOR-1B3 
OPRM1                 0.306   opioid receptor, mu 1 isoform MOR-1B1 
OPRM1                 0.306   opioid receptor, mu 1 isoform MOR-1A 
OPRM1                 0.306   opioid receptor, mu 1 isoform MOR-1B4 
OPRM1                 0.306   opioid receptor, mu 1 isoform MOR-1O 
OPRL1                 0.294   opiate receptor-like 1 
OPRL1                 0.294   opiate receptor-like 1 
OPRM1                 0.268   opioid receptor, mu 1 isoform MOR-1G2 
NPBWR2                0.266   neuropeptides B/W receptor 2 
OPRM1                 0.258   opioid receptor, mu 1 isoform MOR-1G1 
OPRM1                 0.258   opioid receptor, mu 1 isoform MOR1-K1 
NPBWR1                0.245   G protein-coupled receptor 7 
MCHR1                 0.225   G protein-coupled receptor 24 
GALR2                 0.213   galanin receptor 2 
KISS1R                0.194   G protein-coupled receptor 54 
GALR1                 0.192   galanin receptor 1 
UTS2R                 0.190   urotensin 2 receptor 
CMKLR1                0.186   chemokine-like receptor 1 isoform a 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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