RGR 34057

Name: RGR	Sequence: fasta or formatted (291aa)		NCBI GI: 61744454
Description: retinal G-protein coupled receptor isoform 2		Referenced in: Photoreceptors and Related Functions
Other entries for this name: alt prot [295aa] retinal G-protein coupled receptor isoform 1 alt prot [253aa] retinal G-protein coupled receptor isoform 3
Composition: Amino acid Percentage Count Longest homopolymer A alanine 10.0 29 2 C cysteine 3.1 9 2 D aspartate 2.4 7 1 E glutamate 3.1 9 1 F phenylalanine 4.8 14 2 G glycine 6.9 20 1 H histidine 2.1 6 2 I isoleucine 4.5 13 1 K lysine 3.1 9 1 L leucine 15.1 44 3 M methionine 2.7 8 1 N asparagine 3.1 9 1 P proline 4.5 13 1 Q glutamine 2.7 8 1 R arginine 3.4 10 2 S serine 9.3 27 2 T threonine 7.2 21 2 V valine 5.5 16 1 W tryptophan 2.7 8 1 Y tyrosine 3.8 11 1			Comparative genomics: Search single species RefSeq proteins at NCBI H. sapiens M. musculus D. rerio C. intestinalis S. purpuratus D. melanogaster C. elegans A. thaliana S. cerevisiae E. coli W3110 A. pernix K1 Search summary Figure data Additional searches of RefSeq proteins at NCBI All Eukaryotes Bacteria Archaea Viruses Primates Mammals Vertebrates
Related human proteins: Protein Relative score Description Self-match 1.000 retinal G-protein coupled receptor isoform 2 RGR 0.989 retinal G-protein coupled receptor isoform 1 RGR 0.836 retinal G-protein coupled receptor isoform 3 RRH 0.189 peropsin OPN4 0.159 opsin 4 isoform 1 OPN4 0.143 opsin 4 isoform 2 OPN5 0.138 opsin 5 isoform 1 OPN3 0.136 opsin 3 RHO 0.118 rhodopsin OPN1MW2 0.076 opsin 1 (cone pigments), medium-wave-sensitive 2 [H... OPN1MW 0.076 opsin 1 (cone pigments), medium-wave-sensitive OPN1LW 0.074 opsin 1 (cone pigments), long-wave-sensitive MTNR1A 0.062 melatonin receptor 1A GPR50 0.062 G protein-coupled receptor 50 HTR7 0.062 5-hydroxytryptamine receptor 7 isoform b HTR7 0.062 5-hydroxytryptamine receptor 7 isoform d HTR7 0.062 5-hydroxytryptamine receptor 7 isoform a TRHR 0.056 thyrotropin-releasing hormone receptor OPN5 0.056 opsin 5 isoform 2 ADRB2 0.053 adrenergic, beta-2-, receptor, surface OPN1SW 0.053 opsin 1 (cone pigments), short-wave-sensitive ADRB1 0.051 beta-1-adrenergic receptor ADRB3 0.051 adrenergic, beta-3-, receptor MTNR1B 0.049 melatonin receptor 1B SSTR1 0.049 somatostatin receptor 1 TACR3 0.049 tachykinin receptor 3 ADRA1B 0.048 alpha-1B-adrenergic receptor OPRL1 0.048 opiate receptor-like 1 OPRL1 0.048 opiate receptor-like 1 ADRA1D 0.044 alpha-1D-adrenergic receptor Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.