Guide to the Human Genome
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Name: GALR1 Sequence: fasta or formatted (349aa) NCBI GI: 167000885
Description:

galanin receptor 1

Referenced in:

Peptide and Protein G-coupled Signals

Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             8.3         29           2
 C cysteine            2.9         10           1
 D aspartate           1.7          6           1
 E glutamate           2.9         10           1
 F phenylalanine       7.2         25           2
 G glycine             4.6         16           1
 H histidine           4.0         14           2
 I isoleucine          6.0         21           2
 K lysine              5.7         20           3
 L leucine            11.5         40           3
 M methionine          1.4          5           1
 N asparagine          4.0         14           1
 P proline             6.0         21           2
 Q glutamine           1.7          6           1
 R arginine            3.7         13           2
 S serine              8.9         31           3
 T threonine           5.2         18           2
 V valine              9.2         32           5
 W tryptophan          2.0          7           1
 Y tyrosine            3.2         11           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   galanin receptor 1 
GALR2                 0.326   galanin receptor 2 
GALR3                 0.294   galanin receptor 3 
KISS1R                0.246   G protein-coupled receptor 54 
SSTR2                 0.219   somatostatin receptor 2 
SSTR5                 0.214   somatostatin receptor 5 
SSTR4                 0.209   somatostatin receptor 4 
OPRK1                 0.202   opioid receptor, kappa 1 
OPRM1                 0.202   opioid receptor, mu 1 isoform MOR-1H 
OPRM1                 0.202   opioid receptor, mu 1 isoform MOR-1 
OPRM1                 0.202   opioid receptor, mu 1 isoform MOR-1B5 
OPRM1                 0.202   opioid receptor, mu 1 isoform MOR-1B2 
OPRM1                 0.202   opioid receptor, mu 1 isoform MOR-1B3 
OPRM1                 0.202   opioid receptor, mu 1 isoform MOR-1B1 
OPRM1                 0.202   opioid receptor, mu 1 isoform MOR-1A 
OPRM1                 0.202   opioid receptor, mu 1 isoform MOR-1B4 
OPRM1                 0.202   opioid receptor, mu 1 isoform MOR-1O 
OPRM1                 0.202   opioid receptor, mu 1 isoform MOR-1X 
OPRD1                 0.199   opioid receptor, delta 1 
SSTR3                 0.198   somatostatin receptor 3 
BRS3                  0.198   bombesin-like receptor 3 
QRFPR                 0.189   G protein-coupled receptor 103 
PRLHR                 0.189   G protein-coupled receptor 10 
GRPR                  0.189   gastrin-releasing peptide receptor 
LOC100293905          0.189   PREDICTED: similar to gastrin-releasing peptide rec...
OPRL1                 0.189   opiate receptor-like 1 
OPRL1                 0.189   opiate receptor-like 1 
SSTR1                 0.185   somatostatin receptor 1 
OPRM1                 0.183   opioid receptor, mu 1 isoform MOR-1G2 
NPY2R                 0.182   neuropeptide Y receptor Y2 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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