Guide to the Human Genome
Home | Table of Contents | Search text | Search genes | Search sequences | Purchase | FAQ | Blog | Help
Name: HRH2 Sequence: fasta or formatted (397aa) NCBI GI: 197085610
Description:

histamine receptor H2 isoform 1

Referenced in:

Histamine

Other entries for this name:
alt prot [359aa] histamine receptor H2 isoform 2
Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             7.8         31           2
 C cysteine            4.0         16           2
 D aspartate           2.8         11           2
 E glutamate           3.0         12           2
 F phenylalanine       4.5         18           1
 G glycine             4.0         16           1
 H histidine           2.3          9           1
 I isoleucine          7.6         30           2
 K lysine              3.3         13           1
 L leucine            13.1         52           3
 M methionine          1.5          6           1
 N asparagine          5.0         20           1
 P proline             3.8         15           1
 Q glutamine           3.0         12           2
 R arginine            5.5         22           2
 S serine              7.6         30           2
 T threonine           7.3         29           2
 V valine              8.3         33           3
 W tryptophan          2.3          9           1
 Y tyrosine            3.3         13           2
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   histamine receptor H2 isoform 1 
HRH2                  0.889   histamine receptor H2 isoform 2 
HTR4                  0.237   serotonin 5-HT4 receptor isoform n 
HTR4                  0.237   serotonin 5-HT4 receptor isoform i 
HTR4                  0.237   serotonin 5-HT4 receptor isoform d 
HTR4                  0.237   serotonin 5-HT4 receptor isoform a 
HTR4                  0.237   serotonin 5-HT4 receptor isoform g 
HTR4                  0.237   serotonin 5-HT4 receptor isoform b 
DRD1                  0.234   dopamine receptor D1 
ADRB2                 0.231   adrenergic, beta-2-, receptor, surface 
HTR4                  0.230   serotonin 5-HT4 receptor isoform hb 
ADRB1                 0.228   beta-1-adrenergic receptor 
ADRA1B                0.226   alpha-1B-adrenergic receptor 
ADRA1A                0.226   alpha-1A-adrenergic receptor isoform 4 
ADRA1A                0.226   alpha-1A-adrenergic receptor isoform 1 
ADRA1A                0.226   alpha-1A-adrenergic receptor isoform 2 
ADRA1A                0.226   alpha-1A-adrenergic receptor isoform 3 
ADRA1D                0.224   alpha-1D-adrenergic receptor 
DRD5                  0.221   dopamine receptor D5 
ADRB3                 0.215   adrenergic, beta-3-, receptor 
HTR7                  0.204   5-hydroxytryptamine receptor 7 isoform b 
HTR7                  0.204   5-hydroxytryptamine receptor 7 isoform d 
HTR7                  0.204   5-hydroxytryptamine receptor 7 isoform a 
TAAR1                 0.199   trace amine associated receptor 1 
HTR6                  0.197   5-hydroxytryptamine (serotonin) receptor 6 
HTR1F                 0.194   5-hydroxytryptamine (serotonin) receptor 1F 
HTR1D                 0.193   5-hydroxytryptamine (serotonin) receptor 1D 
HTR1B                 0.174   5-hydroxytryptamine (serotonin) receptor 1B 
HTR1E                 0.170   5-hydroxytryptamine (serotonin) receptor 1E 
TAAR5                 0.167   trace amine associated receptor 5 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


Home | Table of Contents | Search text | Search genes | Search sequences | Purchase | FAQ | Blog | Help

Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

CSHL Press