SAMD5 35250

Name: SAMD5	Sequence: fasta or formatted (173aa)		NCBI GI: 71834346
Description: sterile alpha motif domain containing 5		Referenced in: Additional Interaction Domain Families
Composition: Amino acid Percentage Count Longest homopolymer A alanine 8.7 15 2 C cysteine 1.7 3 1 D aspartate 6.4 11 2 E glutamate 5.2 9 1 F phenylalanine 1.2 2 1 G glycine 8.1 14 2 H histidine 1.7 3 1 I isoleucine 4.6 8 1 K lysine 5.2 9 1 L leucine 9.8 17 1 M methionine 2.3 4 1 N asparagine 2.3 4 1 P proline 10.4 18 2 Q glutamine 4.0 7 1 R arginine 9.2 16 3 S serine 5.2 9 2 T threonine 3.5 6 2 V valine 5.2 9 1 W tryptophan 1.2 2 1 Y tyrosine 4.0 7 1			Comparative genomics: Search single species RefSeq proteins at NCBI H. sapiens M. musculus D. rerio C. intestinalis S. purpuratus D. melanogaster C. elegans A. thaliana S. cerevisiae E. coli W3110 A. pernix K1 Search summary Figure data Additional searches of RefSeq proteins at NCBI All Eukaryotes Bacteria Archaea Viruses Primates Mammals Vertebrates
Related human proteins: Protein Relative score Description Self-match 1.000 sterile alpha motif domain containing 5 INPPL1 0.084 inositol polyphosphate phosphatase-like 1 EPHB2 0.075 ephrin receptor EphB2 isoform 1 precursor EPHB2 0.075 ephrin receptor EphB2 isoform 2 precursor EPHB4 0.075 EPH receptor B4 precursor EPHA5 0.075 ephrin receptor EphA5 isoform b precursor EPHA5 0.075 ephrin receptor EphA5 isoform a precursor EPHA2 0.075 ephrin receptor EphA2 SASH1 0.072 SAM and SH3 domain containing 1 ARAP3 0.072 ArfGAP with RhoGAP domain, ankyrin repeat and PH dom... ARAP1 0.072 ArfGAP with RhoGAP domain, ankyrin repeat and PH dom... EPHA4 0.069 ephrin receptor EphA4 CASKIN1 0.069 CASK interacting protein 1 EPHB1 0.066 ephrin receptor EphB1 precursor ANKS1B 0.066 cajalin 2 isoform b ANKS1B 0.066 cajalin 2 isoform a ANKS1B 0.066 cajalin 2 isoform c CASKIN2 0.063 cask-interacting protein 2 isoform b CASKIN2 0.063 cask-interacting protein 2 isoform a ANKS1A 0.060 ankyrin repeat and sterile alpha motif domain conta... EPHB3 0.060 ephrin receptor EphB3 precursor EPHA7 0.057 ephrin receptor EphA7 EPHA6 0.054 EPH receptor A6 isoform a EPHA8 0.051 ephrin receptor EphA8 isoform 1 precursor EPHA10 0.048 EPH receptor A10 isofom 3 EPHA1 0.048 ephrin receptor EphA1 SASH3 0.042 SAM and SH3 domain containing 3 SAMSN1 0.042 SAM domain, SH3 domain and nuclear localization sign... ARAP2 0.042 ArfGAP with RhoGAP domain, ankyrin repeat and PH dom... SHANK2 0.030 SH3 and multiple ankyrin repeat domains 2 isoform 1... Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.