Guide to the Human Genome
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Name: ESRRG Sequence: fasta or formatted (458aa) NCBI GI: 45545433
Description:

estrogen-related receptor gamma isoform 1

Referenced in:

Nuclear Receptors

Other entries for this name:
alt prot [435aa] estrogen-related receptor gamma isoform 2
alt prot [435aa] estrogen-related receptor gamma isoform 2
alt prot [435aa] estrogen-related receptor gamma isoform 2
Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             6.6         30           1
 C cysteine            3.3         15           1
 D aspartate           6.3         29           2
 E glutamate           7.0         32           3
 F phenylalanine       2.2         10           2
 G glycine             5.0         23           2
 H histidine           2.8         13           2
 I isoleucine          4.8         22           2
 K lysine              7.4         34           2
 L leucine            11.4         52           2
 M methionine          3.9         18           1
 N asparagine          3.1         14           2
 P proline             5.2         24           2
 Q glutamine           3.7         17           1
 R arginine            4.4         20           3
 S serine              9.4         43           2
 T threonine           3.5         16           2
 V valine              5.7         26           2
 W tryptophan          0.4          2           1
 Y tyrosine            3.9         18           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   estrogen-related receptor gamma isoform 1 
ESRRG                 0.948   estrogen-related receptor gamma isoform 2 
ESRRG                 0.948   estrogen-related receptor gamma isoform 2 
ESRRG                 0.948   estrogen-related receptor gamma isoform 2 
ESRRB                 0.747   estrogen-related receptor beta 
ESRRA                 0.502   estrogen-related receptor alpha 
ESR1                  0.265   estrogen receptor alpha isoform 4 
ESR1                  0.265   estrogen receptor alpha isoform 3 
ESR1                  0.265   estrogen receptor alpha isoform 2 
ESR1                  0.265   estrogen receptor alpha isoform 1 
ESR2                  0.241   estrogen receptor beta isoform 1 
RXRA                  0.216   retinoid X receptor, alpha 
RXRG                  0.215   retinoid X receptor, gamma isoform a 
ESR2                  0.214   estrogen receptor beta isoform 2 
ESR2                  0.214   estrogen receptor beta isoform 2 
RXRB                  0.205   retinoid X receptor, beta 
RARG                  0.194   retinoic acid receptor, gamma isoform 1 
RARG                  0.188   retinoic acid receptor, gamma isoform 2 
NR2F2                 0.185   nuclear receptor subfamily 2, group F, member 2 isof...
NR2F1                 0.182   nuclear receptor subfamily 2, group F, member 1 [Homo...
RARA                  0.181   retinoic acid receptor, alpha isoform 1 
RARA                  0.181   retinoic acid receptor, alpha isoform 1 
NR4A2                 0.180   nuclear receptor subfamily 4, group A, member 2 [Homo...
RARA                  0.174   retinoic acid receptor, alpha isoform 2 
NR3C1                 0.172   nuclear receptor subfamily 3, group C, member 1 isof...
NR3C1                 0.172   nuclear receptor subfamily 3, group C, member 1 isof...
NR3C1                 0.172   nuclear receptor subfamily 3, group C, member 1 isof...
NR3C1                 0.172   nuclear receptor subfamily 3, group C, member 1 isof...
NR3C1                 0.172   nuclear receptor subfamily 3, group C, member 1 isof...
NR3C1                 0.172   nuclear receptor subfamily 3, group C, member 1 isofo...
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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