Guide to the Human Genome
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Name: NR2E3 Sequence: fasta or formatted (410aa) NCBI GI: 7657395
Description:

photoreceptor-specific nuclear receptor isoform b

Referenced in:

Nuclear Receptors

Other entries for this name:
alt prot [367aa] photoreceptor-specific nuclear receptor isoform a
Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine            10.7         44           4
 C cysteine            3.4         14           1
 D aspartate           3.9         16           1
 E glutamate           6.3         26           2
 F phenylalanine       3.9         16           2
 G glycine             5.9         24           2
 H histidine           2.4         10           2
 I isoleucine          2.7         11           1
 K lysine              4.1         17           2
 L leucine            10.7         44           5
 M methionine          3.2         13           1
 N asparagine          2.4         10           1
 P proline             7.8         32           2
 Q glutamine           4.4         18           1
 R arginine            6.8         28           3
 S serine             10.0         41           4
 T threonine           4.6         19           1
 V valine              4.6         19           1
 W tryptophan          1.0          4           1
 Y tyrosine            1.0          4           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   photoreceptor-specific nuclear receptor isoform b [Ho... 
NR2E3                 0.895   photoreceptor-specific nuclear receptor isoform a [Ho...
NR2E1                 0.347   nuclear receptor subfamily 2, group E, member 1 [Homo...
NR2F6                 0.313   nuclear receptor subfamily 2, group F, member 6 [Hom...
NR2F2                 0.313   nuclear receptor subfamily 2, group F, member 2 isof...
NR2F1                 0.309   nuclear receptor subfamily 2, group F, member 1 [Homo...
RXRG                  0.244   retinoid X receptor, gamma isoform a 
RXRA                  0.242   retinoid X receptor, alpha 
RXRB                  0.238   retinoid X receptor, beta 
HNF4G                 0.200   hepatocyte nuclear factor 4, gamma 
HNF4A                 0.198   hepatocyte nuclear factor 4 alpha isoform f 
HNF4A                 0.198   hepatocyte nuclear factor 4 alpha isoform e 
HNF4A                 0.198   hepatocyte nuclear factor 4 alpha isoform d 
HNF4A                 0.198   hepatocyte nuclear factor 4 alpha isoform c 
HNF4A                 0.198   hepatocyte nuclear factor 4 alpha isoform a 
HNF4A                 0.198   hepatocyte nuclear factor 4 alpha isoform b 
NR2F2                 0.189   nuclear receptor subfamily 2, group F, member 2 iso...
NR2F2                 0.189   nuclear receptor subfamily 2, group F, member 2 iso...
NR2F2                 0.189   nuclear receptor subfamily 2, group F, member 2 iso...
ESRRB                 0.171   estrogen-related receptor beta 
ESRRG                 0.162   estrogen-related receptor gamma isoform 2 
ESRRG                 0.162   estrogen-related receptor gamma isoform 2 
ESRRG                 0.162   estrogen-related receptor gamma isoform 1 
ESRRG                 0.162   estrogen-related receptor gamma isoform 2 
ESRRA                 0.156   estrogen-related receptor alpha 
ESR1                  0.152   estrogen receptor alpha isoform 4 
ESR1                  0.152   estrogen receptor alpha isoform 3 
ESR1                  0.152   estrogen receptor alpha isoform 2 
ESR1                  0.152   estrogen receptor alpha isoform 1 
NR4A1                 0.141   nuclear receptor subfamily 4, group A, member 1 [Hom...
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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