Guide to the Human Genome
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Name: ESRRG Sequence: fasta or formatted (435aa) NCBI GI: 45545427
Description:

estrogen-related receptor gamma isoform 2

Referenced in:

Nuclear Receptors

Other entries for this name:
alt mRNA [435aa] estrogen-related receptor gamma isoform 2
alt mRNA [435aa] estrogen-related receptor gamma isoform 2
alt prot [458aa] estrogen-related receptor gamma isoform 1
Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             6.9         30           1
 C cysteine            3.0         13           1
 D aspartate           6.4         28           2
 E glutamate           6.2         27           2
 F phenylalanine       2.1          9           2
 G glycine             5.3         23           2
 H histidine           2.8         12           2
 I isoleucine          5.1         22           2
 K lysine              7.8         34           2
 L leucine            10.8         47           2
 M methionine          3.9         17           1
 N asparagine          3.2         14           2
 P proline             5.3         23           2
 Q glutamine           3.9         17           1
 R arginine            4.4         19           3
 S serine              9.2         40           2
 T threonine           3.7         16           2
 V valine              5.7         25           2
 W tryptophan          0.5          2           1
 Y tyrosine            3.9         17           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   estrogen-related receptor gamma isoform 2 
ESRRG                 1.000   estrogen-related receptor gamma isoform 2 
ESRRG                 1.000   estrogen-related receptor gamma isoform 1 
ESRRG                 1.000   estrogen-related receptor gamma isoform 2 
ESRRB                 0.789   estrogen-related receptor beta 
ESRRA                 0.529   estrogen-related receptor alpha 
ESR1                  0.279   estrogen receptor alpha isoform 4 
ESR1                  0.279   estrogen receptor alpha isoform 3 
ESR1                  0.279   estrogen receptor alpha isoform 2 
ESR1                  0.279   estrogen receptor alpha isoform 1 
ESR2                  0.255   estrogen receptor beta isoform 1 
RXRA                  0.228   retinoid X receptor, alpha 
RXRG                  0.227   retinoid X receptor, gamma isoform a 
ESR2                  0.225   estrogen receptor beta isoform 2 
ESR2                  0.225   estrogen receptor beta isoform 2 
RXRB                  0.216   retinoid X receptor, beta 
RARG                  0.204   retinoic acid receptor, gamma isoform 1 
RARG                  0.198   retinoic acid receptor, gamma isoform 2 
NR2F2                 0.195   nuclear receptor subfamily 2, group F, member 2 isof...
NR2F1                 0.192   nuclear receptor subfamily 2, group F, member 1 [Homo...
RARA                  0.191   retinoic acid receptor, alpha isoform 1 
RARA                  0.191   retinoic acid receptor, alpha isoform 1 
NR4A2                 0.190   nuclear receptor subfamily 4, group A, member 2 [Homo...
RARA                  0.183   retinoic acid receptor, alpha isoform 2 
NR3C1                 0.182   nuclear receptor subfamily 3, group C, member 1 isof...
NR3C1                 0.182   nuclear receptor subfamily 3, group C, member 1 isof...
NR3C1                 0.182   nuclear receptor subfamily 3, group C, member 1 isof...
NR3C1                 0.182   nuclear receptor subfamily 3, group C, member 1 isof...
NR3C1                 0.182   nuclear receptor subfamily 3, group C, member 1 isof...
NR3C1                 0.182   nuclear receptor subfamily 3, group C, member 1 isofo...
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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