Guide to the Human Genome
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Name: THRB Sequence: fasta or formatted (461aa) NCBI GI: 189491771
Description:

thyroid hormone receptor, beta

Referenced in:

Organs and Hormones
Nuclear Receptors
Thyroid and Thyroid Hormone Receptor

Other entries for this name:
alt mRNA [461aa] thyroid hormone receptor, beta
alt mRNA [461aa] thyroid hormone receptor, beta
Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             5.2         24           2
 C cysteine            4.3         20           2
 D aspartate           6.1         28           2
 E glutamate           8.2         38           2
 F phenylalanine       4.1         19           2
 G glycine             5.0         23           2
 H histidine           4.1         19           2
 I isoleucine          4.8         22           2
 K lysine              8.2         38           2
 L leucine             9.3         43           2
 M methionine          2.8         13           1
 N asparagine          2.8         13           1
 P proline             4.3         20           2
 Q glutamine           3.5         16           1
 R arginine            5.4         25           3
 S serine              6.3         29           2
 T threonine           6.1         28           2
 V valine              5.6         26           2
 W tryptophan          1.3          6           1
 Y tyrosine            2.4         11           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   thyroid hormone receptor, beta 
THRB                  1.000   thyroid hormone receptor, beta 
THRB                  1.000   thyroid hormone receptor, beta 
THRA                  0.673   thyroid hormone receptor, alpha isoform 1 
THRA                  0.591   thyroid hormone receptor, alpha isoform 2 
RARA                  0.228   retinoic acid receptor, alpha isoform 1 
RARA                  0.228   retinoic acid receptor, alpha isoform 1 
RARB                  0.227   retinoic acid receptor, beta isoform 1 
RARA                  0.224   retinoic acid receptor, alpha isoform 2 
RARG                  0.221   retinoic acid receptor, gamma isoform 2 
RARG                  0.221   retinoic acid receptor, gamma isoform 1 
NR1H3                 0.197   nuclear receptor subfamily 1, group H, member 3 iso...
NR1H3                 0.197   nuclear receptor subfamily 1, group H, member 3 iso...
NR1H2                 0.181   nuclear receptor subfamily 1, group H, member 2 [Hom...
RARB                  0.176   retinoic acid receptor, beta isoform 2 
NR1H4                 0.158   nuclear receptor subfamily 1, group H, member 4 [Homo...
NR1I2                 0.157   nuclear receptor subfamily 1, group I, member 2 isof...
NR1I3                 0.154   constitutive androstane receptor isoform 3 
NR1I3                 0.151   constitutive androstane receptor isoform 2 
NR1I3                 0.146   constitutive androstane receptor isoform 1 
VDR                   0.145   vitamin D (1,25-dihydroxyvitamin D3) receptor 
VDR                   0.145   vitamin D (1,25-dihydroxyvitamin D3) receptor 
NR1I3                 0.143   constitutive androstane receptor isoform 7 
NR1I3                 0.141   constitutive androstane receptor isoform 6 
PPARD                 0.136   peroxisome proliferative activated receptor, delta is...
RARA                  0.134   retinoic acid receptor, alpha isoform 4 
NR4A2                 0.134   nuclear receptor subfamily 4, group A, member 2 [Homo...
RXRA                  0.132   retinoid X receptor, alpha 
NR1I3                 0.128   constitutive androstane receptor isoform 4 
NR1I3                 0.128   constitutive androstane receptor isoform 5 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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