Guide to the Human Genome
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Name: PARG Sequence: fasta or formatted (976aa) NCBI GI: 70610136
Description:

poly (ADP-ribose) glycohydrolase

Referenced in:

polyADP-Ribose Polymerase Family

Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             5.9         58           5
 C cysteine            2.6         25           1
 D aspartate           6.0         59           2
 E glutamate           8.7         85           2
 F phenylalanine       3.9         38           2
 G glycine             5.2         51           3
 H histidine           2.5         24           1
 I isoleucine          3.8         37           2
 K lysine              6.6         64           2
 L leucine             7.5         73           3
 M methionine          1.9         19           2
 N asparagine          4.9         48           3
 P proline             5.7         56           2
 Q glutamine           5.0         49           2
 R arginine            6.8         66           2
 S serine              8.0         78           3
 T threonine           6.5         63           2
 V valine              4.5         44           2
 W tryptophan          1.3         13           1
 Y tyrosine            2.7         26           2
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   poly (ADP-ribose) glycohydrolase 
LOC100133130          0.127   PREDICTED: PRO1102 
DSPP                  0.012   dentin sialophosphoprotein preproprotein 
NCL                   0.009   nucleolin 
HTATSF1               0.009   HIV-1 Tat specific factor 1 
HTATSF1               0.009   HIV-1 Tat specific factor 1 
SMARCA2               0.008   SWI/SNF-related matrix-associated actin-dependent re...
SMARCA2               0.008   SWI/SNF-related matrix-associated actin-dependent re...
ATRX                  0.008   transcriptional regulator ATRX isoform 2 
ATRX                  0.008   transcriptional regulator ATRX isoform 1 
ESCO1                 0.008   establishment of cohesion 1 homolog 1 
ARID4B                0.008   AT rich interactive domain 4B isoform 2 
ARID4B                0.008   AT rich interactive domain 4B isoform 1 
DMP1                  0.008   dentin matrix acidic phosphoprotein 1 isoform 1 precu...
DMP1                  0.008   dentin matrix acidic phosphoprotein 1 isoform 2 pre...
FLG                   0.007   filaggrin 
CYLC1                 0.007   cylicin, basic protein of sperm head cytoskeleton 1...
MYST4                 0.007   MYST histone acetyltransferase (monocytic leukemia)...
TOP2A                 0.007   DNA topoisomerase II, alpha isozyme 
ACRC                  0.007   ACRC protein 
TRDN                  0.007   triadin 
LIMA1                 0.006   LIM domain and actin binding 1 isoform c 
LIMA1                 0.006   LIM domain and actin binding 1 isoform a 
LIMA1                 0.006   LIM domain and actin binding 1 isoform b 
IWS1                  0.006   IWS1 homolog 
SDCCAG1               0.006   serologically defined colon cancer antigen 1 
SETD1B                0.006   SET domain containing 1B 
MDN1                  0.006   MDN1, midasin homolog 
SETD1A                0.006   SET domain containing 1A 
NBPF3                 0.006   neuroblastoma breakpoint family, member 3 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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