GABARAPL1 3562

Name: GABARAPL1	Sequence: fasta or formatted (117aa)		NCBI GI: 13899219
Description: GABA(A) receptor-associated protein like 1		Referenced in: GABA and Glycine Additional Membrane Functions
Composition: Amino acid Percentage Count Longest homopolymer A alanine 4.3 5 1 C cysteine 0.0 0 0 D aspartate 7.7 9 1 E glutamate 8.5 10 2 F phenylalanine 6.8 8 3 G glycine 3.4 4 1 H histidine 2.6 3 1 I isoleucine 4.3 5 1 K lysine 11.1 13 2 L leucine 6.8 8 1 M methionine 1.7 2 1 N asparagine 2.6 3 2 P proline 7.7 9 2 Q glutamine 2.6 3 1 R arginine 6.8 8 1 S serine 3.4 4 1 T threonine 3.4 4 1 V valine 7.7 9 1 W tryptophan 0.0 0 0 Y tyrosine 8.5 10 1			Comparative genomics: Search single species RefSeq proteins at NCBI H. sapiens M. musculus D. rerio C. intestinalis S. purpuratus D. melanogaster C. elegans A. thaliana S. cerevisiae E. coli W3110 A. pernix K1 Search summary Figure data Additional searches of RefSeq proteins at NCBI All Eukaryotes Bacteria Archaea Viruses Primates Mammals Vertebrates
Related human proteins: Protein Relative score Description Self-match 1.000 GABA(A) receptor-associated protein like 1 GABARAP 0.868 GABA(A) receptor-associated protein GABARAPL2 0.559 GABA(A) receptor-associated protein-like 2 MAP1LC3C 0.305 microtubule-associated protein 1 light chain 3 gamma... MAP1LC3A 0.255 microtubule-associated protein 1 light chain 3 alpha... MAP1LC3B 0.241 microtubule-associated proteins 1A/1B light chain 3 ... MAP1LC3A 0.236 microtubule-associated protein 1 light chain 3 alpha... MAP1LC3B2 0.223 microtubule-associated protein 1 light chain 3 beta... LOC392288 0.173 PREDICTED: similar to microtubule-associated protei... LOC392288 0.173 PREDICTED: similar to microtubule-associated protei... LOC392288 0.173 PREDICTED: similar to microtubule-associated protei... LOC652191 0.118 PREDICTED: similar to microtubule-associated protei... LOC652191 0.118 PREDICTED: similar to microtubule-associated protei... LOC652191 0.118 PREDICTED: similar to microtubule-associated protei... PRKAA2 0.023 AMP-activated protein kinase alpha 2 catalytic subun... TTN 0.023 titin isoform N2-A GPX6 0.018 glutathione peroxidase 6 GC 0.014 vitamin D-binding protein precursor ATG12 0.014 APG12 autophagy 12-like UBTF 0.009 upstream binding transcription factor, RNA polymera... UBTF 0.009 upstream binding transcription factor, RNA polymera... FBXO18 0.009 F-box only protein, helicase, 18 isoform 1 FBXO18 0.009 F-box only protein, helicase, 18 isoform 2 CENPP 0.009 centromere protein P GPX3 0.009 glutathione peroxidase 3 precursor UBTF 0.009 upstream binding transcription factor, RNA polymerase... CDKL2 0.009 cyclin-dependent kinase-like 2 BAZ1B 0.005 bromodomain adjacent to zinc finger domain, 1B [Homo... EFCAB4B 0.005 EF-hand calcium binding domain 4B isoform c EFCAB4B 0.005 EF-hand calcium binding domain 4B isoform b Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.