Guide to the Human Genome
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Name: PRKAA2 Sequence: fasta or formatted (552aa) NCBI GI: 46877068
Description:

AMP-activated protein kinase alpha 2 catalytic subunit

Referenced in:

Additional Serine / Threonine Protein Kinases

Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             6.0         33           2
 C cysteine            1.8         10           1
 D aspartate           6.3         35           2
 E glutamate           5.6         31           2
 F phenylalanine       3.8         21           2
 G glycine             5.8         32           2
 H histidine           4.0         22           1
 I isoleucine          5.3         29           2
 K lysine              6.3         35           2
 L leucine             9.8         54           2
 M methionine          3.6         20           2
 N asparagine          2.9         16           1
 P proline             5.4         30           2
 Q glutamine           3.1         17           2
 R arginine            5.8         32           2
 S serine              8.7         48           2
 T threonine           4.2         23           2
 V valine              7.1         39           2
 W tryptophan          0.7          4           1
 Y tyrosine            3.8         21           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   AMP-activated protein kinase alpha 2 catalytic subun... 
PRKAA1                0.755   protein kinase, AMP-activated, alpha 1 catalytic sub...
PRKAA1                0.746   protein kinase, AMP-activated, alpha 1 catalytic sub...
SIK2                  0.242   SNF1-like kinase 2 
SIK1                  0.233   SNF1-like kinase 
BRSK1                 0.229   BR serine/threonine kinase 1 
BRSK2                 0.227   BR serine/threonine kinase 2 
QSK                   0.225   serine/threonine-protein kinase QSK 
MARK3                 0.223   MAP/microtubule affinity-regulating kinase 3 isofor...
MARK3                 0.223   MAP/microtubule affinity-regulating kinase 3 isofor...
MARK3                 0.223   MAP/microtubule affinity-regulating kinase 3 isoform...
MARK1                 0.221   MAP/microtubule affinity-regulating kinase 1 
MARK2                 0.220   MAP/microtubule affinity-regulating kinase 2 isofor...
MARK2                 0.220   MAP/microtubule affinity-regulating kinase 2 isofor...
MARK2                 0.220   MAP/microtubule affinity-regulating kinase 2 isofor...
MARK2                 0.220   MAP/microtubule affinity-regulating kinase 2 isofor...
MARK2                 0.220   MAP/microtubule affinity-regulating kinase 2 isoform...
MARK3                 0.220   MAP/microtubule affinity-regulating kinase 3 isofor...
MARK4                 0.214   MAP/microtubule affinity-regulating kinase 4 
MELK                  0.205   maternal embryonic leucine zipper kinase 
NUAK1                 0.198   AMPK-related protein kinase 5 
NUAK2                 0.193   NUAK family, SNF1-like kinase, 2 
SNRK                  0.179   SNF related kinase 
SNRK                  0.179   SNF related kinase 
MGC42105              0.172   serine/threonine-protein kinase NIM1 
HUNK                  0.163   hormonally upregulated Neu-associated kinase 
CAMK1D                0.140   calcium/calmodulin-dependent protein kinase ID isofor...
CAMK1D                0.140   calcium/calmodulin-dependent protein kinase ID isofo...
CAMK1                 0.139   calcium/calmodulin-dependent protein kinase I 
PNCK                  0.135   pregnancy upregulated non-ubiquitously expressed Ca...
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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