LOC652191 20392

Name: LOC652191	Sequence: fasta or formatted (105aa)		NCBI GI: 239750436
Description: PREDICTED: similar to microtubule-associated protein 1 light chain 3 beta		Referenced in: Tubulins and Microtubules
Other entries for this name: alt mRNA [105aa] PREDICTED: similar to microtubule-associated proteins 1A/1B light... alt mRNA [105aa] PREDICTED: similar to microtubule-associated protein 1 light chai...
Composition: Amino acid Percentage Count Longest homopolymer A alanine 2.9 3 1 C cysteine 2.9 3 2 D aspartate 3.8 4 1 E glutamate 8.6 9 1 F phenylalanine 6.7 7 2 G glycine 4.8 5 1 H histidine 1.0 1 1 I isoleucine 1.9 2 2 K lysine 9.5 10 1 L leucine 10.5 11 2 M methionine 2.9 3 1 N asparagine 4.8 5 1 P proline 3.8 4 1 Q glutamine 3.8 4 1 R arginine 3.8 4 1 S serine 7.6 8 1 T threonine 7.6 8 1 V valine 8.6 9 1 W tryptophan 0.0 0 0 Y tyrosine 4.8 5 1			Comparative genomics: Search single species RefSeq proteins at NCBI H. sapiens M. musculus D. rerio C. intestinalis S. purpuratus D. melanogaster C. elegans A. thaliana S. cerevisiae E. coli W3110 A. pernix K1 Search summary Figure data Additional searches of RefSeq proteins at NCBI All Eukaryotes Bacteria Archaea Viruses Primates Mammals Vertebrates
Related human proteins: Protein Relative score Description Self-match 1.000 PREDICTED: similar to microtubule-associated protei... LOC652191 1.000 PREDICTED: similar to microtubule-associated protei... LOC652191 1.000 PREDICTED: similar to microtubule-associated protei... MAP1LC3B 0.683 microtubule-associated proteins 1A/1B light chain 3 ... MAP1LC3B2 0.661 microtubule-associated protein 1 light chain 3 beta... LOC392288 0.614 PREDICTED: similar to microtubule-associated protei... LOC392288 0.614 PREDICTED: similar to microtubule-associated protei... LOC392288 0.614 PREDICTED: similar to microtubule-associated protei... MAP1LC3A 0.577 microtubule-associated protein 1 light chain 3 alpha... MAP1LC3A 0.577 microtubule-associated protein 1 light chain 3 alpha... MAP1LC3C 0.349 microtubule-associated protein 1 light chain 3 gamma... GABARAPL2 0.185 GABA(A) receptor-associated protein-like 2 GABARAPL1 0.138 GABA(A) receptor-associated protein like 1 GABARAP 0.127 GABA(A) receptor-associated protein AMIGO1 0.042 AMIGO protein NR2E1 0.021 nuclear receptor subfamily 2, group E, member 1 [Homo... ATG12 0.016 APG12 autophagy 12-like RBM44 0.011 RNA binding motif protein 44 MCTP1 0.011 multiple C2 domains, transmembrane 1 isoform S [Homo... MCTP1 0.011 multiple C2 domains, transmembrane 1 isoform L [Hom... PLXND1 0.011 plexin D1 OGFOD1 0.005 2-oxoglutarate and iron-dependent oxygenase domain c... LRP1 0.005 low density lipoprotein-related protein 1 Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.