LOC392288 8169

Name: LOC392288	Sequence: fasta or formatted (157aa)		NCBI GI: 169183885
Description: PREDICTED: similar to microtubule-associated proteins 1A/1B light chain 3		Referenced in: Tubulins and Microtubules
Other entries for this name: alt prot [377aa] PREDICTED: similar to microtubule-associated proteins 1A/1B light... alt prot [377aa] PREDICTED: similar to microtubule-associated proteins 1A/1B light...
Composition: Amino acid Percentage Count Longest homopolymer A alanine 3.2 5 1 C cysteine 0.0 0 0 D aspartate 4.5 7 1 E glutamate 7.0 11 1 F phenylalanine 3.8 6 1 G glycine 3.2 5 1 H histidine 1.3 2 1 I isoleucine 3.2 5 2 K lysine 6.4 10 1 L leucine 7.6 12 2 M methionine 3.2 5 1 N asparagine 3.2 5 1 P proline 7.0 11 1 Q glutamine 7.0 11 2 R arginine 14.0 22 6 S serine 6.4 10 1 T threonine 5.7 9 1 V valine 9.6 15 2 W tryptophan 0.0 0 0 Y tyrosine 3.8 6 1			Comparative genomics: Search single species RefSeq proteins at NCBI H. sapiens M. musculus D. rerio C. intestinalis S. purpuratus D. melanogaster C. elegans A. thaliana S. cerevisiae E. coli W3110 A. pernix K1 Search summary Figure data Additional searches of RefSeq proteins at NCBI All Eukaryotes Bacteria Archaea Viruses Primates Mammals Vertebrates
Related human proteins: Protein Relative score Description Self-match 1.000 PREDICTED: similar to microtubule-associated protei... LOC392288 0.778 PREDICTED: similar to microtubule-associated protei... LOC392288 0.778 PREDICTED: similar to microtubule-associated protei... MAP1LC3B 0.656 microtubule-associated proteins 1A/1B light chain 3 ... MAP1LC3B2 0.642 microtubule-associated protein 1 light chain 3 beta... MAP1LC3A 0.524 microtubule-associated protein 1 light chain 3 alpha... MAP1LC3A 0.476 microtubule-associated protein 1 light chain 3 alpha... LOC652191 0.403 PREDICTED: similar to microtubule-associated protei... LOC652191 0.403 PREDICTED: similar to microtubule-associated protei... LOC652191 0.403 PREDICTED: similar to microtubule-associated protei... MAP1LC3C 0.312 microtubule-associated protein 1 light chain 3 gamma... GABARAPL2 0.184 GABA(A) receptor-associated protein-like 2 GABARAPL1 0.132 GABA(A) receptor-associated protein like 1 GABARAP 0.128 GABA(A) receptor-associated protein MARCH7 0.031 axotrophin RUNX1 0.024 runt-related transcription factor 1 isoform AML1a [... RUNX1 0.024 runt-related transcription factor 1 isoform AML1c [H... RUNX1 0.024 runt-related transcription factor 1 isoform AML1b [H... SFRS15 0.024 splicing factor, arginine/serine-rich 15 isoform 3 ... SFRS15 0.024 splicing factor, arginine/serine-rich 15 isoform 2 ... SFRS15 0.024 splicing factor, arginine/serine-rich 15 isoform 1 [... OXSR1 0.017 oxidative-stress responsive 1 AMIGO1 0.017 AMIGO protein DOCK9 0.014 dedicator of cytokinesis 9 isoform d DOCK9 0.014 dedicator of cytokinesis 9 isoform c DOCK9 0.014 dedicator of cytokinesis 9 isoform b DOCK9 0.014 dedicator of cytokinesis 9 isoform a TRPS1 0.014 zinc finger transcription factor TRPS1 C11orf71 0.014 hypothetical protein LOC54494 UTRN 0.010 utrophin Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.