GABARAP 33841

Name: GABARAP	Sequence: fasta or formatted (117aa)		NCBI GI: 6005764
Description: GABA(A) receptor-associated protein		Referenced in: GABA and Glycine Additional Membrane Functions
Composition: Amino acid Percentage Count Longest homopolymer A alanine 5.1 6 1 C cysteine 0.0 0 0 D aspartate 6.0 7 1 E glutamate 9.4 11 2 F phenylalanine 7.7 9 3 G glycine 4.3 5 1 H histidine 3.4 4 2 I isoleucine 6.0 7 1 K lysine 10.3 12 3 L leucine 7.7 9 1 M methionine 1.7 2 1 N asparagine 1.7 2 2 P proline 6.0 7 2 Q glutamine 2.6 3 1 R arginine 6.8 8 2 S serine 4.3 5 1 T threonine 2.6 3 1 V valine 7.7 9 1 W tryptophan 0.0 0 0 Y tyrosine 6.8 8 1			Comparative genomics: Search single species RefSeq proteins at NCBI H. sapiens M. musculus D. rerio C. intestinalis S. purpuratus D. melanogaster C. elegans A. thaliana S. cerevisiae E. coli W3110 A. pernix K1 Search summary Figure data Additional searches of RefSeq proteins at NCBI All Eukaryotes Bacteria Archaea Viruses Primates Mammals Vertebrates
Related human proteins: Protein Relative score Description Self-match 1.000 GABA(A) receptor-associated protein GABARAPL1 0.884 GABA(A) receptor-associated protein like 1 GABARAPL2 0.542 GABA(A) receptor-associated protein-like 2 MAP1LC3C 0.301 microtubule-associated protein 1 light chain 3 gamma... MAP1LC3B 0.236 microtubule-associated proteins 1A/1B light chain 3 ... MAP1LC3A 0.222 microtubule-associated protein 1 light chain 3 alpha... MAP1LC3B2 0.218 microtubule-associated protein 1 light chain 3 beta... MAP1LC3A 0.199 microtubule-associated protein 1 light chain 3 alpha... LOC392288 0.171 PREDICTED: similar to microtubule-associated protei... LOC392288 0.171 PREDICTED: similar to microtubule-associated protei... LOC392288 0.171 PREDICTED: similar to microtubule-associated protei... LOC652191 0.111 PREDICTED: similar to microtubule-associated protei... LOC652191 0.111 PREDICTED: similar to microtubule-associated protei... LOC652191 0.111 PREDICTED: similar to microtubule-associated protei... GPX6 0.014 glutathione peroxidase 6 FAF1 0.014 FAS-associated factor 1 ATG12 0.014 APG12 autophagy 12-like FBXO18 0.009 F-box only protein, helicase, 18 isoform 1 FBXO18 0.009 F-box only protein, helicase, 18 isoform 2 EFCAB4B 0.009 EF-hand calcium binding domain 4B isoform c EFCAB4B 0.009 EF-hand calcium binding domain 4B isoform b EFCAB4B 0.009 EF-hand calcium binding domain 4B isoform a RYR2 0.009 cardiac muscle ryanodine receptor RYR1 0.009 skeletal muscle ryanodine receptor isoform 2 RYR1 0.009 skeletal muscle ryanodine receptor isoform 1 RYR3 0.009 ryanodine receptor 3 TTN 0.005 titin isoform N2-A GPX3 0.005 glutathione peroxidase 3 precursor SGK3 0.005 serum/glucocorticoid regulated kinase 3 isoform 2 [H... SGK3 0.005 serum/glucocorticoid regulated kinase 3 isoform 1 [H... Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.