MAP1LC3B2 4434

Name: MAP1LC3B2	Sequence: fasta or formatted (125aa)		NCBI GI: 148277548
Description: microtubule-associated protein 1 light chain 3 beta 2		Referenced in: Tubulins and Microtubules
Composition: Amino acid Percentage Count Longest homopolymer A alanine 2.4 3 1 C cysteine 0.8 1 1 D aspartate 4.0 5 1 E glutamate 9.6 12 1 F phenylalanine 5.6 7 2 G glycine 3.2 4 1 H histidine 2.4 3 1 I isoleucine 6.4 8 2 K lysine 8.0 10 1 L leucine 8.8 11 2 M methionine 4.0 5 1 N asparagine 3.2 4 1 P proline 4.8 6 1 Q glutamine 5.6 7 1 R arginine 7.2 9 3 S serine 7.2 9 1 T threonine 4.8 6 1 V valine 9.6 12 1 W tryptophan 0.0 0 0 Y tyrosine 2.4 3 1			Comparative genomics: Search single species RefSeq proteins at NCBI H. sapiens M. musculus D. rerio C. intestinalis S. purpuratus D. melanogaster C. elegans A. thaliana S. cerevisiae E. coli W3110 A. pernix K1 Search summary Figure data Additional searches of RefSeq proteins at NCBI All Eukaryotes Bacteria Archaea Viruses Primates Mammals Vertebrates
Related human proteins: Protein Relative score Description Self-match 1.000 microtubule-associated protein 1 light chain 3 beta... MAP1LC3B 0.982 microtubule-associated proteins 1A/1B light chain 3 ... LOC392288 0.830 PREDICTED: similar to microtubule-associated protei... LOC392288 0.830 PREDICTED: similar to microtubule-associated protei... LOC392288 0.830 PREDICTED: similar to microtubule-associated protei... MAP1LC3A 0.789 microtubule-associated protein 1 light chain 3 alpha... MAP1LC3A 0.704 microtubule-associated protein 1 light chain 3 alpha... LOC652191 0.561 PREDICTED: similar to microtubule-associated protei... LOC652191 0.561 PREDICTED: similar to microtubule-associated protei... LOC652191 0.561 PREDICTED: similar to microtubule-associated protei... MAP1LC3C 0.480 microtubule-associated protein 1 light chain 3 gamma... GABARAPL2 0.287 GABA(A) receptor-associated protein-like 2 GABARAPL1 0.220 GABA(A) receptor-associated protein like 1 GABARAP 0.211 GABA(A) receptor-associated protein ATG12 0.022 APG12 autophagy 12-like LOC730429 0.009 PREDICTED: similar to ubiquitin protein ligase E3 c... LOC730429 0.009 PREDICTED: similar to ubiquitin protein ligase E3 c... CLCN3 0.009 chloride channel 3 isoform e CLCN3 0.009 chloride channel 3 isoform b UBR5 0.009 ubiquitin protein ligase E3 component n-recognin 5 [... AMIGO1 0.009 AMIGO protein PLXND1 0.004 plexin D1 ZCCHC6 0.004 zinc finger, CCHC domain containing 6 Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.