Guide to the Human Genome
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Name: FBXO18 Sequence: fasta or formatted (1043aa) NCBI GI: 30795119
Description:

F-box only protein, helicase, 18 isoform 2

Referenced in:

Cullins and SCF Complexes

Other entries for this name:
alt prot [1094aa] F-box only protein, helicase, 18 isoform 1
Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             6.8         71           3
 C cysteine            3.0         31           2
 D aspartate           4.2         44           2
 E glutamate           6.9         72           3
 F phenylalanine       4.1         43           2
 G glycine             5.8         60           2
 H histidine           3.2         33           2
 I isoleucine          5.4         56           2
 K lysine              6.3         66           3
 L leucine             9.8        102           2
 M methionine          1.6         17           1
 N asparagine          3.8         40           2
 P proline             5.0         52           2
 Q glutamine           4.3         45           2
 R arginine            6.0         63           2
 S serine              7.0         73           3
 T threonine           5.2         54           2
 V valine              7.4         77           2
 W tryptophan          1.5         16           1
 Y tyrosine            2.7         28           2
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   F-box only protein, helicase, 18 isoform 2 
FBXO18                1.000   F-box only protein, helicase, 18 isoform 1 
FBXO6                 0.007   F-box only protein 6 
FBXO44                0.007   F-box protein 44 isoform 2 
FBXO44                0.007   F-box protein 44 isoform 1 
FBXO44                0.007   F-box protein 44 isoform 2 
FBXO44                0.007   F-box protein 44 isoform 1 
FBXO33                0.006   F-box protein 33 
LOC100294390          0.006   PREDICTED: similar to hCG2041351 
FBXL12                0.006   F-box and leucine-rich repeat protein 12 
RP1L1                 0.005   retinitis pigmentosa 1-like 1 
FBXO11                0.005   F-box only protein 11 isoform 1 
FBXO11                0.005   F-box only protein 11 isoform 2 
FBXO11                0.005   F-box only protein 11 isoform 3 
LOC100130716          0.004   PREDICTED: similar to mucin 11 
FLJ31945              0.004   PREDICTED: hypothetical protein 
FLJ31945              0.004   PREDICTED: hypothetical protein 
FLJ31945              0.004   PREDICTED: hypothetical protein 
MUC12                 0.004   PREDICTED: mucin 12 
GTF3C1                0.004   general transcription factor IIIC, polypeptide 1, a...
SAMD14                0.004   sterile alpha motif domain containing 14 
MUC12                 0.004   PREDICTED: mucin 12 
PDZD2                 0.004   PDZ domain containing 2 
ARID1B                0.004   AT rich interactive domain 1B (SWI1-like) isoform 2 ...
ARID1B                0.004   AT rich interactive domain 1B (SWI1-like) isoform 1 ...
ARID1B                0.004   AT rich interactive domain 1B (SWI1-like) isoform 3 ...
LOC100292655          0.004   PREDICTED: similar to armadillo repeat containing, ...
TRIM28                0.004   tripartite motif-containing 28 protein 
PHLPP1                0.004   PH domain and leucine rich repeat protein phosphatas...
PPFIA3                0.004   PTPRF interacting protein alpha 3 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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