LOC392288 8143

Name: LOC392288	Sequence: fasta or formatted (377aa)		NCBI GI: 169180155
Description: PREDICTED: similar to microtubule-associated proteins 1A/1B light chain 3		Referenced in: Tubulins and Microtubules
Other entries for this name: alt mRNA [377aa] PREDICTED: similar to microtubule-associated proteins 1A/1B light... alt prot [157aa] PREDICTED: similar to microtubule-associated proteins 1A/1B light...
Composition: Amino acid Percentage Count Longest homopolymer A alanine 5.3 20 2 C cysteine 2.4 9 1 D aspartate 4.2 16 1 E glutamate 6.6 25 2 F phenylalanine 4.5 17 1 G glycine 6.9 26 3 H histidine 2.4 9 1 I isoleucine 3.2 12 2 K lysine 4.5 17 1 L leucine 8.2 31 2 M methionine 1.6 6 1 N asparagine 3.4 13 1 P proline 6.6 25 2 Q glutamine 6.9 26 2 R arginine 7.7 29 3 S serine 9.0 34 3 T threonine 5.0 19 1 V valine 8.0 30 2 W tryptophan 1.3 5 2 Y tyrosine 2.1 8 1			Comparative genomics: Search single species RefSeq proteins at NCBI H. sapiens M. musculus D. rerio C. intestinalis S. purpuratus D. melanogaster C. elegans A. thaliana S. cerevisiae E. coli W3110 A. pernix K1 Search summary Figure data Additional searches of RefSeq proteins at NCBI All Eukaryotes Bacteria Archaea Viruses Primates Mammals Vertebrates
Related human proteins: Protein Relative score Description Self-match 1.000 PREDICTED: similar to microtubule-associated protei... LOC392288 1.000 PREDICTED: similar to microtubule-associated protei... LOC392288 0.301 PREDICTED: similar to microtubule-associated protei... MAP1LC3B 0.254 microtubule-associated proteins 1A/1B light chain 3 ... MAP1LC3B2 0.248 microtubule-associated protein 1 light chain 3 beta... MAP1LC3A 0.203 microtubule-associated protein 1 light chain 3 alpha... MAP1LC3A 0.184 microtubule-associated protein 1 light chain 3 alpha... LOC652191 0.156 PREDICTED: similar to microtubule-associated protei... LOC652191 0.156 PREDICTED: similar to microtubule-associated protei... LOC652191 0.156 PREDICTED: similar to microtubule-associated protei... MAP1LC3C 0.119 microtubule-associated protein 1 light chain 3 gamma... GABARAPL2 0.071 GABA(A) receptor-associated protein-like 2 GABARAPL1 0.051 GABA(A) receptor-associated protein like 1 GABARAP 0.050 GABA(A) receptor-associated protein CSPG4 0.011 chondroitin sulfate proteoglycan 4 MARCH7 0.007 axotrophin AMIGO1 0.007 AMIGO protein MGAT3 0.007 mannosyl (beta-1,4-)-glycoprotein beta-1,4-N-acetyl... MGAT3 0.007 mannosyl (beta-1,4-)-glycoprotein beta-1,4-N-acetyl... DOCK9 0.005 dedicator of cytokinesis 9 isoform d DOCK9 0.005 dedicator of cytokinesis 9 isoform c DOCK9 0.005 dedicator of cytokinesis 9 isoform b DOCK9 0.005 dedicator of cytokinesis 9 isoform a PSD3 0.005 ADP-ribosylation factor guanine nucleotide factor 6... UTRN 0.005 utrophin Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.