Guide to the Human Genome
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Name: GPX6 Sequence: fasta or formatted (221aa) NCBI GI: 33186887
Description:

glutathione peroxidase 6

Referenced in:

Glutathione Pathways
Selenium Proteins

Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             5.0         11           2
 C cysteine            2.3          5           1
 D aspartate           2.7          6           1
 E glutamate           6.3         14           2
 F phenylalanine       9.5         21           2
 G glycine             8.1         18           1
 H histidine           2.3          5           1
 I isoleucine          2.7          6           1
 K lysine              7.2         16           1
 L leucine            10.4         23           2
 M methionine          1.4          3           1
 N asparagine          5.4         12           1
 P proline             5.4         12           2
 Q glutamine           7.7         17           2
 R arginine            0.9          2           1
 S serine              5.0         11           3
 T threonine           4.1          9           1
 U selenocysteine      0.5          1           1
 V valine              8.6         19           1
 W tryptophan          1.4          3           1
 Y tyrosine            3.2          7           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   glutathione peroxidase 6 
GPX3                  0.706   glutathione peroxidase 3 precursor 
GPX5                  0.664   glutathione peroxidase 5 isoform 1 precursor 
GPX1                  0.278   glutathione peroxidase 1 isoform 1 
GPX2                  0.262   glutathione peroxidase 2 
GPX5                  0.146   glutathione peroxidase 5 isoform 2 precursor 
GPX4                  0.116   glutathione peroxidase 4 isoform C precursor 
GPX4                  0.116   glutathione peroxidase 4 isoform A precursor 
GPX7                  0.109   glutathione peroxidase 7 
GPX8                  0.104   glutathione peroxidase 8 
GPX4                  0.097   glutathione peroxidase 4 isoform B precursor 
GPX1                  0.067   glutathione peroxidase 1 isoform 2 
LOC392435             0.009   PREDICTED: similar to hCG1811022 
LOC392435             0.009   PREDICTED: similar to hCG1811022 
LOC392435             0.009   PREDICTED: similar to hCG1811022 
GABARAPL1             0.009   GABA(A) receptor-associated protein like 1 
MYCL1                 0.009   l-myc-1 proto-oncogene isoform 1 
MYCL1                 0.009   l-myc-1 proto-oncogene isoform 1 
GABARAP               0.007   GABA(A) receptor-associated protein 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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