Guide to the Human Genome
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Search of human proteins with 13787204

BLASTP 2.2.11 [Jun-05-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= gi|13787204 DEAD box polypeptide 17 isoform 2 [Homo sapiens]
         (183 letters)

Database: hs.faa 
           37,866 sequences; 18,247,518 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gi|148613856 DEAD box polypeptide 17 isoform 3 [Homo sapiens]         383   e-107
gi|13787204 DEAD box polypeptide 17 isoform 2 [Homo sapiens]          383   e-107
gi|148613858 DEAD box polypeptide 17 isoform 4 [Homo sapiens]         374   e-104
gi|38201710 DEAD box polypeptide 17 isoform 1 [Homo sapiens]          374   e-104
gi|4504733 insulin receptor substrate 4 [Homo sapiens]                 50   1e-06
gi|4826734 fusion (involved in t(12;16) in malignant liposarcoma...    50   1e-06
gi|61743946 abl-interactor 1 isoform c [Homo sapiens]                  50   1e-06
gi|21536320 heterogeneous nuclear ribonucleoprotein U-like 1 iso...    46   2e-05
gi|21536326 heterogeneous nuclear ribonucleoprotein U-like 1 iso...    46   2e-05
gi|61743948 abl-interactor 1 isoform d [Homo sapiens]                  45   3e-05
gi|61743944 abl-interactor 1 isoform b [Homo sapiens]                  45   3e-05
gi|62122917 filaggrin family member 2 [Homo sapiens]                   45   5e-05
gi|4758138 DEAD (Asp-Glu-Ala-Asp) box polypeptide 5 [Homo sapiens]     44   1e-04
gi|40068464 AT rich interactive domain 1B (SWI1-like) isoform 2 ...    44   1e-04
gi|40068466 AT rich interactive domain 1B (SWI1-like) isoform 1 ...    44   1e-04
gi|40068462 AT rich interactive domain 1B (SWI1-like) isoform 3 ...    44   1e-04
gi|57864582 hornerin [Homo sapiens]                                    43   1e-04
gi|14043072 heterogeneous nuclear ribonucleoprotein A2/B1 isofor...    43   1e-04
gi|4504447 heterogeneous nuclear ribonucleoprotein A2/B1 isoform...    43   1e-04
gi|195972866 keratin 10 [Homo sapiens]                                 42   2e-04
gi|119395750 keratin 1 [Homo sapiens]                                  41   5e-04
gi|15055543 splicing factor, arginine/serine-rich 2B [Homo sapiens]    41   7e-04
gi|33946297 zinc finger protein 326 isoform 1 [Homo sapiens]           40   9e-04
gi|4507353 TBP-associated factor 15 isoform 2 [Homo sapiens]           40   0.001
gi|21327701 TBP-associated factor 15 isoform 1 [Homo sapiens]          40   0.001
gi|253970506 Ewing sarcoma breakpoint region 1 isoform 5 [Homo s...    39   0.002
gi|253970502 Ewing sarcoma breakpoint region 1 isoform 3 [Homo s...    39   0.002
gi|4885225 Ewing sarcoma breakpoint region 1 isoform 2 [Homo sap...    39   0.002
gi|212549553 interleukin enhancer binding factor 3 isoform d [Ho...    39   0.002
gi|24234750 interleukin enhancer binding factor 3 isoform a [Hom...    39   0.002

>gi|148613856 DEAD box polypeptide 17 isoform 3 [Homo sapiens]
          Length = 731

 Score =  383 bits (983), Expect = e-107
 Identities = 183/183 (100%), Positives = 183/183 (100%)

Query: 1   MQLVDHRGGGGGGGKGGRSRYRTTSSANNPNLMYQDECDRRLRGVKDGGRRDSASYRDRS 60
           MQLVDHRGGGGGGGKGGRSRYRTTSSANNPNLMYQDECDRRLRGVKDGGRRDSASYRDRS
Sbjct: 549 MQLVDHRGGGGGGGKGGRSRYRTTSSANNPNLMYQDECDRRLRGVKDGGRRDSASYRDRS 608

Query: 61  ETDRAGYANGSGYGSPNSAFGAQAGQYTYGQGTYGAAAYGTSSYTAQEYGAGTYGASSTT 120
           ETDRAGYANGSGYGSPNSAFGAQAGQYTYGQGTYGAAAYGTSSYTAQEYGAGTYGASSTT
Sbjct: 609 ETDRAGYANGSGYGSPNSAFGAQAGQYTYGQGTYGAAAYGTSSYTAQEYGAGTYGASSTT 668

Query: 121 STGRSSQSSSQQFSGIGRSGQQPQPLMSQQFAQPPGATNMIGYMGQTAYQYPPPPPPPPP 180
           STGRSSQSSSQQFSGIGRSGQQPQPLMSQQFAQPPGATNMIGYMGQTAYQYPPPPPPPPP
Sbjct: 669 STGRSSQSSSQQFSGIGRSGQQPQPLMSQQFAQPPGATNMIGYMGQTAYQYPPPPPPPPP 728

Query: 181 SRK 183
           SRK
Sbjct: 729 SRK 731


>gi|13787204 DEAD box polypeptide 17 isoform 2 [Homo sapiens]
          Length = 183

 Score =  383 bits (983), Expect = e-107
 Identities = 183/183 (100%), Positives = 183/183 (100%)

Query: 1   MQLVDHRGGGGGGGKGGRSRYRTTSSANNPNLMYQDECDRRLRGVKDGGRRDSASYRDRS 60
           MQLVDHRGGGGGGGKGGRSRYRTTSSANNPNLMYQDECDRRLRGVKDGGRRDSASYRDRS
Sbjct: 1   MQLVDHRGGGGGGGKGGRSRYRTTSSANNPNLMYQDECDRRLRGVKDGGRRDSASYRDRS 60

Query: 61  ETDRAGYANGSGYGSPNSAFGAQAGQYTYGQGTYGAAAYGTSSYTAQEYGAGTYGASSTT 120
           ETDRAGYANGSGYGSPNSAFGAQAGQYTYGQGTYGAAAYGTSSYTAQEYGAGTYGASSTT
Sbjct: 61  ETDRAGYANGSGYGSPNSAFGAQAGQYTYGQGTYGAAAYGTSSYTAQEYGAGTYGASSTT 120

Query: 121 STGRSSQSSSQQFSGIGRSGQQPQPLMSQQFAQPPGATNMIGYMGQTAYQYPPPPPPPPP 180
           STGRSSQSSSQQFSGIGRSGQQPQPLMSQQFAQPPGATNMIGYMGQTAYQYPPPPPPPPP
Sbjct: 121 STGRSSQSSSQQFSGIGRSGQQPQPLMSQQFAQPPGATNMIGYMGQTAYQYPPPPPPPPP 180

Query: 181 SRK 183
           SRK
Sbjct: 181 SRK 183


>gi|148613858 DEAD box polypeptide 17 isoform 4 [Homo sapiens]
          Length = 181

 Score =  374 bits (959), Expect = e-104
 Identities = 181/183 (98%), Positives = 181/183 (98%), Gaps = 2/183 (1%)

Query: 1   MQLVDHRGGGGGGGKGGRSRYRTTSSANNPNLMYQDECDRRLRGVKDGGRRDSASYRDRS 60
           MQLVDHRGGGGGGG  GRSRYRTTSSANNPNLMYQDECDRRLRGVKDGGRRDSASYRDRS
Sbjct: 1   MQLVDHRGGGGGGG--GRSRYRTTSSANNPNLMYQDECDRRLRGVKDGGRRDSASYRDRS 58

Query: 61  ETDRAGYANGSGYGSPNSAFGAQAGQYTYGQGTYGAAAYGTSSYTAQEYGAGTYGASSTT 120
           ETDRAGYANGSGYGSPNSAFGAQAGQYTYGQGTYGAAAYGTSSYTAQEYGAGTYGASSTT
Sbjct: 59  ETDRAGYANGSGYGSPNSAFGAQAGQYTYGQGTYGAAAYGTSSYTAQEYGAGTYGASSTT 118

Query: 121 STGRSSQSSSQQFSGIGRSGQQPQPLMSQQFAQPPGATNMIGYMGQTAYQYPPPPPPPPP 180
           STGRSSQSSSQQFSGIGRSGQQPQPLMSQQFAQPPGATNMIGYMGQTAYQYPPPPPPPPP
Sbjct: 119 STGRSSQSSSQQFSGIGRSGQQPQPLMSQQFAQPPGATNMIGYMGQTAYQYPPPPPPPPP 178

Query: 181 SRK 183
           SRK
Sbjct: 179 SRK 181


>gi|38201710 DEAD box polypeptide 17 isoform 1 [Homo sapiens]
          Length = 729

 Score =  374 bits (959), Expect = e-104
 Identities = 181/183 (98%), Positives = 181/183 (98%), Gaps = 2/183 (1%)

Query: 1   MQLVDHRGGGGGGGKGGRSRYRTTSSANNPNLMYQDECDRRLRGVKDGGRRDSASYRDRS 60
           MQLVDHRGGGGGGG  GRSRYRTTSSANNPNLMYQDECDRRLRGVKDGGRRDSASYRDRS
Sbjct: 549 MQLVDHRGGGGGGG--GRSRYRTTSSANNPNLMYQDECDRRLRGVKDGGRRDSASYRDRS 606

Query: 61  ETDRAGYANGSGYGSPNSAFGAQAGQYTYGQGTYGAAAYGTSSYTAQEYGAGTYGASSTT 120
           ETDRAGYANGSGYGSPNSAFGAQAGQYTYGQGTYGAAAYGTSSYTAQEYGAGTYGASSTT
Sbjct: 607 ETDRAGYANGSGYGSPNSAFGAQAGQYTYGQGTYGAAAYGTSSYTAQEYGAGTYGASSTT 666

Query: 121 STGRSSQSSSQQFSGIGRSGQQPQPLMSQQFAQPPGATNMIGYMGQTAYQYPPPPPPPPP 180
           STGRSSQSSSQQFSGIGRSGQQPQPLMSQQFAQPPGATNMIGYMGQTAYQYPPPPPPPPP
Sbjct: 667 STGRSSQSSSQQFSGIGRSGQQPQPLMSQQFAQPPGATNMIGYMGQTAYQYPPPPPPPPP 726

Query: 181 SRK 183
           SRK
Sbjct: 727 SRK 729


>gi|4504733 insulin receptor substrate 4 [Homo sapiens]
          Length = 1257

 Score = 50.1 bits (118), Expect = 1e-06
 Identities = 50/179 (27%), Positives = 68/179 (37%), Gaps = 41/179 (22%)

Query: 7   RGGGGGGGKGGRSRYRTTSSANNPNLMYQDECDRRLRGVKDG-GRRDSASYRDRSETDRA 65
           RG GGG G  G+     +S  N        +C    +G + G G     S  ++   D  
Sbjct: 499 RGSGGGQGSNGQGSSSHSSGGN--------QCSGEGQGSRGGQGSNGQGSGGNQCSRDGQ 550

Query: 66  GYANGSGYGS---PNSAFGAQAGQYTYGQGTYGAAAYGTSSYTAQEYGAGTYGASSTTST 122
           G A G G G    P    G+  GQ   G G    +  G +S   +  G+G  G+      
Sbjct: 551 GTAGGHGSGGGQRPGGGHGSGGGQ---GPGDGHGSGGGKNSGGGKGSGSGK-GSDGDGER 606

Query: 123 GRSSQSSSQQFSGIGRSGQQPQPLMSQQFAQPPGATNMIGYMGQTAYQYPPPPPPPPPS 181
           G+S +  S  F  + +S QQ  P        PP                PPPPPPPPP+
Sbjct: 607 GKSLKKRSY-FGKLTQSKQQQMP--------PP----------------PPPPPPPPPA 640


>gi|4826734 fusion (involved in t(12;16) in malignant liposarcoma)
           [Homo sapiens]
          Length = 526

 Score = 49.7 bits (117), Expect = 1e-06
 Identities = 42/128 (32%), Positives = 58/128 (45%), Gaps = 7/128 (5%)

Query: 49  GRRDSASYRDRSETDRAGYANGSGYG-SPNSAFGAQAGQYTYGQ-GTYGAAAYGTSSYTA 106
           G++  + Y   ++T   G ++ S YG S N+ +G Q+    YG  G YG++    SSY  
Sbjct: 34  GQQSYSGYSQSTDTSGYGQSSYSSYGQSQNTGYGTQSTPQGYGSTGGYGSSQSSQSSYGQ 93

Query: 107 QE----YGAGTYGASSTTSTGRSSQSSSQQFSGIGRSGQQPQPLMSQQ-FAQPPGATNMI 161
           Q     YG     +S++ S G SSQSSS      G   QQP     QQ + Q        
Sbjct: 94  QSSYPGYGQQPAPSSTSGSYGSSSQSSSYGQPQSGSYSQQPSYGGQQQSYGQQQSYNPPQ 153

Query: 162 GYMGQTAY 169
           GY  Q  Y
Sbjct: 154 GYGQQNQY 161



 Score = 33.9 bits (76), Expect = 0.080
 Identities = 27/112 (24%), Positives = 43/112 (38%), Gaps = 6/112 (5%)

Query: 62  TDRAGYANGSGYGSPNSAFGAQAGQYTYGQGTYGAAAYGTSSYTAQEYGAGTYGASSTTS 121
           T +A  + G+    P   +  Q+ Q  YGQ +Y   +  T +    +    +YG S  T 
Sbjct: 7   TQQATQSYGAYPTQPGQGYSQQSSQ-PYGQQSYSGYSQSTDTSGYGQSSYSSYGQSQNTG 65

Query: 122 TGRSSQSSSQQFSGIGRSGQQPQPLMSQQ-----FAQPPGATNMIGYMGQTA 168
            G  S       +G   S Q  Q    QQ     + Q P  ++  G  G ++
Sbjct: 66  YGTQSTPQGYGSTGGYGSSQSSQSSYGQQSSYPGYGQQPAPSSTSGSYGSSS 117



 Score = 33.1 bits (74), Expect = 0.14
 Identities = 29/114 (25%), Positives = 40/114 (35%), Gaps = 25/114 (21%)

Query: 7   RGGGGGGGKGGRSRYRTTS-------------------SANNPNLMYQDECDRRLRGVKD 47
           RGG GGGG GG  R    S                   +  N N  +++EC++      D
Sbjct: 394 RGGYGGGGSGGGGRGGFPSGGGGGGGQQRAGDWKCPNPTCENMNFSWRNECNQCKAPKPD 453

Query: 48  ------GGRRDSASYRDRSETDRAGYANGSGYGSPNSAFGAQAGQYTYGQGTYG 95
                 GG     +Y D     R GY  G   G      G + G+    +G +G
Sbjct: 454 GPGGGPGGSHMGGNYGDDRRGGRGGYDRGGYRGRGGDRGGFRGGRGGGDRGGFG 507



 Score = 32.7 bits (73), Expect = 0.18
 Identities = 30/126 (23%), Positives = 45/126 (35%), Gaps = 11/126 (8%)

Query: 16  GGRSRYRTTSSANNPNLMYQDECDRRLRGVKDGGRRDSASYRDRSETDRAGYANGSGYGS 75
           GG+ +      + NP   Y  +          GG     +Y     +  +G  +G GYG+
Sbjct: 137 GGQQQSYGQQQSYNPPQGYGQQNQYNSSSGGGGGGGGGGNYGQDQSSMSSGGGSGGGYGN 196

Query: 76  PNSAFGAQAGQYTYGQGTYGAAAYGTSSYTAQEYGAGTYGASSTTSTGRSSQSSSQQFSG 135
            + + G  +G   YGQ   G    G         G+G  G        RSS     +  G
Sbjct: 197 QDQSGGGGSG--GYGQQDRGGRGRG---------GSGGGGGGGGGGYNRSSGGYEPRGRG 245

Query: 136 IGRSGQ 141
            GR G+
Sbjct: 246 GGRGGR 251



 Score = 32.0 bits (71), Expect = 0.30
 Identities = 33/128 (25%), Positives = 42/128 (32%), Gaps = 26/128 (20%)

Query: 8   GGGGGGGKGGRSRYRTTSSANNPNLMYQDECDRRLRGVKDGGRRDSASYRDRSETDRAGY 67
           GGGGGGG GG                 QD+      G   GG             D++G 
Sbjct: 166 GGGGGGGGGGN--------------YGQDQSSMSSGGGSGGG---------YGNQDQSGG 202

Query: 68  ANGSGYGSPNSAFGAQAGQYTYGQGTYGAAAYGTSSYTAQEYGAGTYGASSTTSTGRSSQ 127
               GYG  +     + G  + G G  G   Y  SS   +  G G  G       G S +
Sbjct: 203 GGSGGYGQQDRGGRGRGG--SGGGGGGGGGGYNRSSGGYEPRGRGG-GRGGRGGMGGSDR 259

Query: 128 SSSQQFSG 135
               +F G
Sbjct: 260 GGFNKFGG 267



 Score = 31.2 bits (69), Expect = 0.52
 Identities = 24/66 (36%), Positives = 26/66 (39%), Gaps = 8/66 (12%)

Query: 7   RGGGGGGGKGGRSRYRTTSSANNPNLMYQDECDRRLRGVKD-------GGRRDSASYRDR 59
           RGG GGGG GG   Y  +S    P         R   G  D       GG RD  S  D 
Sbjct: 218 RGGSGGGGGGGGGGYNRSSGGYEPRGRGGGRGGRGGMGGSDRGGFNKFGGPRDQGSRHD- 276

Query: 60  SETDRA 65
           SE D +
Sbjct: 277 SEQDNS 282



 Score = 29.6 bits (65), Expect = 1.5
 Identities = 34/140 (24%), Positives = 47/140 (33%), Gaps = 17/140 (12%)

Query: 11  GGGGKGGRSRYRTTSSANNPNLMYQDECDRRLRGVKDGGRRDSASYRDRSETDRAGYANG 70
           G G  GG    +++ S+      Y         G +      S SY   S++   G    
Sbjct: 74  GYGSTGGYGSSQSSQSSYGQQSSYPGY------GQQPAPSSTSGSYGSSSQSSSYGQPQS 127

Query: 71  SGYGSPNSAFGAQAGQYTYGQGTYGAAAYG-TSSYTAQEYGAGTYGASSTTSTGRSSQSS 129
             Y S   ++G Q   Y   Q       YG  + Y +   G G  G        +SS SS
Sbjct: 128 GSY-SQQPSYGGQQQSYGQQQSYNPPQGYGQQNQYNSSSGGGGGGGGGGNYGQDQSSMSS 186

Query: 130 ---------SQQFSGIGRSG 140
                    +Q  SG G SG
Sbjct: 187 GGGSGGGYGNQDQSGGGGSG 206


>gi|61743946 abl-interactor 1 isoform c [Homo sapiens]
          Length = 452

 Score = 49.7 bits (117), Expect = 1e-06
 Identities = 47/171 (27%), Positives = 66/171 (38%), Gaps = 14/171 (8%)

Query: 11  GGGGKGGRSRYRTTSSANNPNLMYQDECD-RRLRGVKDGGRRDSASYRDRSETDRAGYAN 69
           G G  G  + Y+T      P +         RL      GR  S + R R+ +  +G  +
Sbjct: 188 GRGTLGRNTPYKTLEPVKPPTVPNDYMTSPARLGSQHSPGRTASLNQRPRTHSGSSG-GS 246

Query: 70  GSGYGSPNSAFGAQAGQYTYGQGTYGAAAYGTSSYTAQEYGAGTYGASSTTSTGRSSQSS 129
           GS   S +S+ G      T    T G AA G++     +YG  T   S   ST  S+ S 
Sbjct: 247 GSRENSGSSSIGIPIAVPTPSPPTIGPAAPGSAP--GSQYGTMTRQISRHNSTTSSTSSG 304

Query: 130 SQQFSGIGRSGQQPQPLMSQQFAQPPGATNMIGYMGQTAYQYPPPPPPPPP 180
                     G +  P ++ QF+  P       Y   +    P PPPPPPP
Sbjct: 305 ----------GYRRTPSVTAQFSAQPHVNGGPLYSQNSIADSPTPPPPPPP 345


>gi|21536320 heterogeneous nuclear ribonucleoprotein U-like 1
           isoform d [Homo sapiens]
          Length = 756

 Score = 46.2 bits (108), Expect = 2e-05
 Identities = 55/201 (27%), Positives = 74/201 (36%), Gaps = 51/201 (25%)

Query: 5   DHRGGGGG---GGKGGRSRYRTTSSANNPNLMYQDECDRRLRGVKDGGRRDSASYRDRSE 61
           D+RGGGG    GG GG  RY            +Q+         + GG     +Y  R  
Sbjct: 510 DNRGGGGFRGRGGGGGFQRYENRGPPGGNRGGFQN---------RGGGSGGGGNY--RGG 558

Query: 62  TDRAGYANGSGYGSPNSAFGAQAGQYTYGQGTYGAAAY---------------------G 100
            +R+G   G GY         +    +  +G+Y  A                        
Sbjct: 559 FNRSG---GGGYSQNRWGNNNRDNNNSNNRGSYNRAPQQQPPPQQPPPPQPPPQQPPPPP 615

Query: 101 TSSYTAQEYGAGTYGASSTTSTGRSSQSSSQQFSGIGRSGQQPQPLMSQQFAQPPGATNM 160
           + S      GA TY  +S    G S+ +S+   S    S   PQP     ++QPP   N 
Sbjct: 616 SYSPARNPPGASTYNKNSNI-PGSSANTSTPTVS----SYSPPQP----SYSQPP--YNQ 664

Query: 161 IGYMGQTAYQYPPPPPPPPPS 181
            GY     Y  PPPPPPPPP+
Sbjct: 665 GGY--SQGYTAPPPPPPPPPA 683



 Score = 37.0 bits (84), Expect = 0.009
 Identities = 38/157 (24%), Positives = 57/157 (36%), Gaps = 24/157 (15%)

Query: 33  MYQDECDRRLRGVKDGGRRDSASYRDRSETDRAGYANGSGYGSPNSAF-------GAQAG 85
           + ++E D+ +R   + GR+       R +    G   G G G     +       G + G
Sbjct: 482 LQREEADKLVRQYNEEGRKAGPPPEKRFDNRGGGGFRGRGGGGGFQRYENRGPPGGNRGG 541

Query: 86  QYTYGQGTYGAAAYGTSSYTAQEYGAGTYGASSTTSTGRSSQSSSQQFSGIGRSGQQPQP 145
               G G+ G   Y      +   G G Y  +   +  R + +S+ + S      QQP P
Sbjct: 542 FQNRGGGSGGGGNYRGGFNRS---GGGGYSQNRWGNNNRDNNNSNNRGSYNRAPQQQPPP 598

Query: 146 LMSQQFAQPPGATNMIGYMGQTAYQYPPPPPPPPPSR 182
                  QPP          Q   Q PPPPP   P+R
Sbjct: 599 ------QQPPPP--------QPPPQQPPPPPSYSPAR 621


>gi|21536326 heterogeneous nuclear ribonucleoprotein U-like 1
           isoform a [Homo sapiens]
          Length = 856

 Score = 46.2 bits (108), Expect = 2e-05
 Identities = 55/201 (27%), Positives = 74/201 (36%), Gaps = 51/201 (25%)

Query: 5   DHRGGGGG---GGKGGRSRYRTTSSANNPNLMYQDECDRRLRGVKDGGRRDSASYRDRSE 61
           D+RGGGG    GG GG  RY            +Q+         + GG     +Y  R  
Sbjct: 610 DNRGGGGFRGRGGGGGFQRYENRGPPGGNRGGFQN---------RGGGSGGGGNY--RGG 658

Query: 62  TDRAGYANGSGYGSPNSAFGAQAGQYTYGQGTYGAAAY---------------------G 100
            +R+G   G GY         +    +  +G+Y  A                        
Sbjct: 659 FNRSG---GGGYSQNRWGNNNRDNNNSNNRGSYNRAPQQQPPPQQPPPPQPPPQQPPPPP 715

Query: 101 TSSYTAQEYGAGTYGASSTTSTGRSSQSSSQQFSGIGRSGQQPQPLMSQQFAQPPGATNM 160
           + S      GA TY  +S    G S+ +S+   S    S   PQP     ++QPP   N 
Sbjct: 716 SYSPARNPPGASTYNKNSNI-PGSSANTSTPTVS----SYSPPQP----SYSQPP--YNQ 764

Query: 161 IGYMGQTAYQYPPPPPPPPPS 181
            GY     Y  PPPPPPPPP+
Sbjct: 765 GGY--SQGYTAPPPPPPPPPA 783



 Score = 37.0 bits (84), Expect = 0.009
 Identities = 38/157 (24%), Positives = 57/157 (36%), Gaps = 24/157 (15%)

Query: 33  MYQDECDRRLRGVKDGGRRDSASYRDRSETDRAGYANGSGYGSPNSAF-------GAQAG 85
           + ++E D+ +R   + GR+       R +    G   G G G     +       G + G
Sbjct: 582 LQREEADKLVRQYNEEGRKAGPPPEKRFDNRGGGGFRGRGGGGGFQRYENRGPPGGNRGG 641

Query: 86  QYTYGQGTYGAAAYGTSSYTAQEYGAGTYGASSTTSTGRSSQSSSQQFSGIGRSGQQPQP 145
               G G+ G   Y      +   G G Y  +   +  R + +S+ + S      QQP P
Sbjct: 642 FQNRGGGSGGGGNYRGGFNRS---GGGGYSQNRWGNNNRDNNNSNNRGSYNRAPQQQPPP 698

Query: 146 LMSQQFAQPPGATNMIGYMGQTAYQYPPPPPPPPPSR 182
                  QPP          Q   Q PPPPP   P+R
Sbjct: 699 ------QQPPPP--------QPPPQQPPPPPSYSPAR 721


>gi|61743948 abl-interactor 1 isoform d [Homo sapiens]
          Length = 476

 Score = 45.4 bits (106), Expect = 3e-05
 Identities = 54/191 (28%), Positives = 74/191 (38%), Gaps = 25/191 (13%)

Query: 11  GGGGKGGRSRYRTTSSANNPNLMYQDECD-RRLRGVKDGGRRDSASYRDRSETDRAGYAN 69
           G G  G  + Y+T      P +         RL      GR  S + R R+ +  +G  +
Sbjct: 183 GRGTLGRNTPYKTLEPVKPPTVPNDYMTSPARLGSQHSPGRTASLNQRPRTHSGSSG-GS 241

Query: 70  GSGYGSPNSAFGAQAGQYTYGQGTYGAAAYGTSSYTAQEYGAGTYGAS------STTSTG 123
           GS   S +S+ G      T    T G AA G++     +YG  T   S      S+TS+G
Sbjct: 242 GSRENSGSSSIGIPIAVPTPSPPTIGPAAPGSAP--GSQYGTMTRQISRHNSTTSSTSSG 299

Query: 124 --RSSQSSSQQFSGIGR------------SGQQPQPLMSQQFAQPPGATNMIGYMGQTAY 169
             R + S + QFS                S   P P M Q   Q P  T  +  + +   
Sbjct: 300 GYRRTPSVTAQFSAQPHVNGGPLYSQNSISIAPPPPPMPQLTPQIP-LTGFVARVQENIA 358

Query: 170 QYPPPPPPPPP 180
             P PPPPPPP
Sbjct: 359 DSPTPPPPPPP 369


>gi|61743944 abl-interactor 1 isoform b [Homo sapiens]
          Length = 481

 Score = 45.4 bits (106), Expect = 3e-05
 Identities = 54/191 (28%), Positives = 74/191 (38%), Gaps = 25/191 (13%)

Query: 11  GGGGKGGRSRYRTTSSANNPNLMYQDECD-RRLRGVKDGGRRDSASYRDRSETDRAGYAN 69
           G G  G  + Y+T      P +         RL      GR  S + R R+ +  +G  +
Sbjct: 188 GRGTLGRNTPYKTLEPVKPPTVPNDYMTSPARLGSQHSPGRTASLNQRPRTHSGSSG-GS 246

Query: 70  GSGYGSPNSAFGAQAGQYTYGQGTYGAAAYGTSSYTAQEYGAGTYGAS------STTSTG 123
           GS   S +S+ G      T    T G AA G++     +YG  T   S      S+TS+G
Sbjct: 247 GSRENSGSSSIGIPIAVPTPSPPTIGPAAPGSAP--GSQYGTMTRQISRHNSTTSSTSSG 304

Query: 124 --RSSQSSSQQFSGIGR------------SGQQPQPLMSQQFAQPPGATNMIGYMGQTAY 169
             R + S + QFS                S   P P M Q   Q P  T  +  + +   
Sbjct: 305 GYRRTPSVTAQFSAQPHVNGGPLYSQNSISIAPPPPPMPQLTPQIP-LTGFVARVQENIA 363

Query: 170 QYPPPPPPPPP 180
             P PPPPPPP
Sbjct: 364 DSPTPPPPPPP 374


>gi|62122917 filaggrin family member 2 [Homo sapiens]
          Length = 2391

 Score = 44.7 bits (104), Expect = 5e-05
 Identities = 31/138 (22%), Positives = 57/138 (41%), Gaps = 8/138 (5%)

Query: 9   GGGGGGKGGRSRYRTTSSANNPNLMYQDECDRRLRGVKDGGRRDSASYRDRSETDRAGY- 67
           G G G   G  ++ + S  ++    ++    +   G    G   S+ Y        +G+ 
Sbjct: 736 GSGSGQSSGFGQHGSGSGQSSGFGQHESRSGQSSYGQHSSGSSQSSGYGQHGSRQTSGFG 795

Query: 68  ------ANGSGYGSPNSAFGAQAGQYTYGQGTYGAAAYGTSSYTAQEYGAGTYGASSTTS 121
                 +  +G+G   S  G  AG   +G G+  ++ +G     + +   G +G+ S+ S
Sbjct: 796 QHGSGSSQSTGFGQYGSGSGQSAGFGQHGSGSGQSSGFGQHESRSHQSSYGQHGSGSSQS 855

Query: 122 TGRSSQ-SSSQQFSGIGR 138
           +G     SSS Q SG G+
Sbjct: 856 SGYGQHGSSSGQTSGFGQ 873



 Score = 44.3 bits (103), Expect = 6e-05
 Identities = 40/139 (28%), Positives = 65/139 (46%), Gaps = 13/139 (9%)

Query: 8   GGGGGGGKGGRSRYRTTSSANNPNLMYQDECDRRLRGVKDGGRRDSASYRDRSETDRAGY 67
           G G    + G+S Y   SS ++ +  Y     R+  G    G   S S      T    Y
Sbjct: 757 GFGQHESRSGQSSYGQHSSGSSQSSGYGQHGSRQTSGFGQHGSGSSQS------TGFGQY 810

Query: 68  ANGSGYGSPNSAFGAQAGQYTYGQGTYGAAAYGTS-----SYTAQEYGAGTYGASSTTST 122
            +GSG  +     G+ +GQ + G G + + ++ +S     S ++Q  G G +G+SS  ++
Sbjct: 811 GSGSGQSAGFGQHGSGSGQ-SSGFGQHESRSHQSSYGQHGSGSSQSSGYGQHGSSSGQTS 869

Query: 123 G-RSSQSSSQQFSGIGRSG 140
           G    +SSS Q+SG G+ G
Sbjct: 870 GFGQHRSSSGQYSGFGQHG 888



 Score = 43.1 bits (100), Expect = 1e-04
 Identities = 37/155 (23%), Positives = 61/155 (39%), Gaps = 23/155 (14%)

Query: 9    GGGGGGKGGRSRYRTTSSANNPNLMYQDECDRRLRGVKDGGRRDSASYRDRSETD----- 63
            G G G   G  ++ T S   +    ++    +   G    G   S+ Y     +      
Sbjct: 888  GSGSGQSSGFGQHGTGSGQYSGFGQHESRSHQSSYGQHGSGSSQSSGYGQHGSSSGQTFG 947

Query: 64   ----RAGYANGSGYGSPNSAFGAQAGQYTYGQGTYGAAAYGT-------------SSYTA 106
                R+G    SG+G   S  G  +G   +  G+  ++ +G               S ++
Sbjct: 948  FGQHRSGSGQSSGFGQHGSGSGQSSGFGQHESGSGKSSGFGQHESRSSQSNYGQHGSGSS 1007

Query: 107  QEYGAGTYGASSTTSTG-RSSQSSSQQFSGIGRSG 140
            Q  G G +G+SS  +TG    +SSS Q+SG G+ G
Sbjct: 1008 QSSGYGQHGSSSGQTTGFGQHRSSSGQYSGFGQHG 1042



 Score = 40.0 bits (92), Expect = 0.001
 Identities = 41/142 (28%), Positives = 60/142 (42%), Gaps = 14/142 (9%)

Query: 8   GGGGGGGKGGRSRYRTTSSANNPNLMYQDECDRRLRGVKDGGRRDSASYRDRSETDRAGY 67
           G G    + G+S Y   SS ++ +  Y     R+  G    G   S S         +G 
Sbjct: 605 GFGQHESRSGQSSYGQHSSGSSQSSGYGQHGSRQTSGFGQHGSGSSQSTGFGQYGSGSGQ 664

Query: 68  ANGSGYGSPNSAFGAQAGQY--TYGQGTYGAAAYGTSSYTAQEYGAGTYGASSTTSTG-- 123
           ++G G     S   +  GQ+    G  +YG   +G+S    Q  G G +G+SS  ++G  
Sbjct: 665 SSGFGQHVSGSGQSSGFGQHESRSGHSSYGQHGFGSS----QSSGYGQHGSSSGQTSGFG 720

Query: 124 ----RSSQSSS--QQFSGIGRS 139
                S QSSS  Q  SG G+S
Sbjct: 721 QHELSSGQSSSFGQHGSGSGQS 742



 Score = 39.3 bits (90), Expect = 0.002
 Identities = 28/130 (21%), Positives = 46/130 (35%), Gaps = 9/130 (6%)

Query: 9    GGGGGGKGGRSRYRTTSSANNPNLMYQDECDRRLRGVKDGGRRDSASYRDRSETD----- 63
            G G     G  ++ T S  ++    Y+    +   G    G   S+ Y            
Sbjct: 1042 GSGSDQSSGFGQHGTGSGQSSGFGQYESRSRQSSYGQHGSGSSQSSGYGQHGSNSGQTSG 1101

Query: 64   ----RAGYANGSGYGSPNSAFGAQAGQYTYGQGTYGAAAYGTSSYTAQEYGAGTYGASST 119
                R G    SG+G   S  G  +G   +G GT  ++ +    Y + +   G +G  S+
Sbjct: 1102 FGQHRPGSGQSSGFGQYGSGSGQSSGFGQHGSGTGKSSGFAQHEYRSGQSSYGQHGTGSS 1161

Query: 120  TSTGRSSQSS 129
             S+G     S
Sbjct: 1162 QSSGCGQHES 1171



 Score = 38.9 bits (89), Expect = 0.002
 Identities = 35/168 (20%), Positives = 64/168 (38%), Gaps = 12/168 (7%)

Query: 9    GGGGGGKGGRSRYRTTSSANNPNLMYQDECDRRLRGVKDGGRRDSASYRDRSETD----- 63
            G G G   G  ++ + S  ++    ++    +   G    G   S+ Y     +      
Sbjct: 965  GSGSGQSSGFGQHESGSGKSSGFGQHESRSSQSNYGQHGSGSSQSSGYGQHGSSSGQTTG 1024

Query: 64   ----RAGYANGSGYGSPNSAFGAQAGQYTYGQGTYGAAAYGTSSYTAQEYGAGTYGASST 119
                R+     SG+G   S     +G   +G G+  ++ +G     +++   G +G+ S+
Sbjct: 1025 FGQHRSSSGQYSGFGQHGSGSDQSSGFGQHGTGSGQSSGFGQYESRSRQSSYGQHGSGSS 1084

Query: 120  TSTGRSSQ-SSSQQFSGIGRSGQQPQPLMSQQFAQPPGATNMIGYMGQ 166
             S+G     S+S Q SG G+   +P    S  F Q    +      GQ
Sbjct: 1085 QSSGYGQHGSNSGQTSGFGQ--HRPGSGQSSGFGQYGSGSGQSSGFGQ 1130



 Score = 38.1 bits (87), Expect = 0.004
 Identities = 28/139 (20%), Positives = 56/139 (40%), Gaps = 8/139 (5%)

Query: 9   GGGGGGKGGRSRYRTTSSANNPNLMYQDECDRRLRGVKDGGRRDSASYRDRSETDRAGYA 68
           G   G   G  ++ + S  ++    ++    +   G    G   S+ Y      + +G+ 
Sbjct: 509 GSVSGQSSGFGQHGSVSGQSSGFGQHESRSRQSSYGQHGSGSSQSSGYGQYGSRETSGFG 568

Query: 69  N-------GSGYGSPNSAFGAQAGQYTYGQGTYGAAAYGTSSYTAQEYGAGTYGASSTTS 121
                    +G+G   S  G  +G   +G G+  ++ +G     + +   G + + S+ S
Sbjct: 569 QHGLGSGQSTGFGQYGSGSGQSSGFGQHGSGSGQSSGFGQHESRSGQSSYGQHSSGSSQS 628

Query: 122 TGRSSQSSSQQFSGIGRSG 140
           +G   Q  S+Q SG G+ G
Sbjct: 629 SG-YGQHGSRQTSGFGQHG 646



 Score = 38.1 bits (87), Expect = 0.004
 Identities = 34/144 (23%), Positives = 52/144 (36%), Gaps = 12/144 (8%)

Query: 9   GGGGGGKGGRSRYRTTSSANNPNLMYQDECDRRLRGVKDGGRRDSASYRDRSETD----- 63
           G G G   G  ++ + S  ++    ++    +   G    G   S+ Y     +      
Sbjct: 811 GSGSGQSAGFGQHGSGSGQSSGFGQHESRSHQSSYGQHGSGSSQSSGYGQHGSSSGQTSG 870

Query: 64  ----RAGYANGSGYGSPNSAFGAQA--GQYTYGQGTYGAAAYGTSSYTAQEYGAGTYGAS 117
               R+     SG+G   S  G  +  GQ+  G G Y       S      YG    G+S
Sbjct: 871 FGQHRSSSGQYSGFGQHGSGSGQSSGFGQHGTGSGQYSGFGQHESRSHQSSYGQHGSGSS 930

Query: 118 STTSTGRSSQSSSQQFS-GIGRSG 140
            ++  G+   SS Q F  G  RSG
Sbjct: 931 QSSGYGQHGSSSGQTFGFGQHRSG 954



 Score = 37.7 bits (86), Expect = 0.006
 Identities = 38/137 (27%), Positives = 58/137 (42%), Gaps = 11/137 (8%)

Query: 8   GGGGGGGKGGRSRYRTTSSANNPNLMYQDECDRRLRGVKDGGRRDSASYRDRSETDRAGY 67
           G G    +  +S Y    S ++ +  Y     R   G    G     S      T    Y
Sbjct: 530 GFGQHESRSRQSSYGQHGSGSSQSSGYGQYGSRETSGFGQHGLGSGQS------TGFGQY 583

Query: 68  ANGSGYGSPNSAFGAQAGQYT-YGQ--GTYGAAAYGT-SSYTAQEYGAGTYGASSTTSTG 123
            +GSG  S     G+ +GQ + +GQ     G ++YG  SS ++Q  G G +G+  T+  G
Sbjct: 584 GSGSGQSSGFGQHGSGSGQSSGFGQHESRSGQSSYGQHSSGSSQSSGYGQHGSRQTSGFG 643

Query: 124 RSSQSSSQQFSGIGRSG 140
           +    SSQ  +G G+ G
Sbjct: 644 QHGSGSSQS-TGFGQYG 659



 Score = 35.0 bits (79), Expect = 0.036
 Identities = 40/144 (27%), Positives = 53/144 (36%), Gaps = 33/144 (22%)

Query: 14  GKGGRSRYRTTS---SANNPNLMYQDECDRRLRGVKDGGRRDSASYRDRSETDRAGYANG 70
           G GG S    TS   S +  + + + +      G  D GRR  A           GY+N 
Sbjct: 236 GHGGLSCGLETSGHESNSTQSRIREQKLGSSCSGSGDSGRRSHA----------CGYSNS 285

Query: 71  SGYGSPNSA--------FGAQAGQYTYGQ-----GTYGAAAYGTSSYTAQEYGAGTYGAS 117
           SG G P +A        FG Q  Q++Y Q     G  G   +G  S        G     
Sbjct: 286 SGCGRPQNASSSCQSHRFGGQGNQFSYIQSGCQSGIKGGQGHGCVS-------GGQPSGC 338

Query: 118 STTSTGRSSQSSSQQFSGIGRSGQ 141
               +   SQS SQ+  G   +GQ
Sbjct: 339 GQPESNPCSQSYSQRGYGARENGQ 362



 Score = 35.0 bits (79), Expect = 0.036
 Identities = 34/133 (25%), Positives = 46/133 (34%), Gaps = 8/133 (6%)

Query: 6    HRGGGGGGGKGGRS---RYRTT--SSANNPNLMYQDECDRRLRGVKDGGRRDSASYRDRS 60
            H   G   G+ G S   R+ TT   + +     +        RG +  GRR S       
Sbjct: 2051 HGQAGSQHGESGSSVHERHGTTHGQTGDTTRHAHSGHGQSTQRGSRTAGRRGSGHSESSD 2110

Query: 61   ETDRAGYAN---GSGYGSPNSAFGAQAGQYTYGQGTYGAAAYGTSSYTAQEYGAGTYGAS 117
                +G ++   G  YG   S  G         QGT       T+ +    +G  T   S
Sbjct: 2111 SEVHSGVSHTHSGHTYGQARSQHGESGSAIHGRQGTIHGQTGDTTRHGQSGHGQSTQTGS 2170

Query: 118  STTSTGRSSQSSS 130
             TT   RSS S S
Sbjct: 2171 RTTGRQRSSHSES 2183



 Score = 34.7 bits (78), Expect = 0.047
 Identities = 30/141 (21%), Positives = 55/141 (39%), Gaps = 10/141 (7%)

Query: 9   GGGGGGKGGRSRYRTTSSANNPNLMYQDECDRRLRGVKDGGRRDSASYRDR--SETDRAG 66
           G G G   G  ++ + S  ++    ++        G    G   S+ Y     S    +G
Sbjct: 659 GSGSGQSSGFGQHVSGSGQSSGFGQHESRSGHSSYGQHGFGSSQSSGYGQHGSSSGQTSG 718

Query: 67  YAN-------GSGYGSPNSAFGAQAGQYTYGQGTYGAAAYGTSSYTAQEYGAGTYGASST 119
           +          S +G   S  G  +G   +G G+  ++ +G     + +   G + + S+
Sbjct: 719 FGQHELSSGQSSSFGQHGSGSGQSSGFGQHGSGSGQSSGFGQHESRSGQSSYGQHSSGSS 778

Query: 120 TSTGRSSQSSSQQFSGIGRSG 140
            S+G   Q  S+Q SG G+ G
Sbjct: 779 QSSG-YGQHGSRQTSGFGQHG 798



 Score = 34.7 bits (78), Expect = 0.047
 Identities = 30/87 (34%), Positives = 48/87 (55%), Gaps = 12/87 (13%)

Query: 65  AGYANGSG-YGS---PNSAFG---AQAGQYTYGQ---GTYGAAAYGTSSYTAQEYGAGTY 114
           +G ++G G +GS    +S FG   +++GQ +YGQ   G+  ++ YG    + Q  G G +
Sbjct: 739 SGQSSGFGQHGSGSGQSSGFGQHESRSGQSSYGQHSSGSSQSSGYGQHG-SRQTSGFGQH 797

Query: 115 GASSTTSTGRSSQ-SSSQQFSGIGRSG 140
           G+ S+ STG     S S Q +G G+ G
Sbjct: 798 GSGSSQSTGFGQYGSGSGQSAGFGQHG 824



 Score = 33.9 bits (76), Expect = 0.080
 Identities = 25/79 (31%), Positives = 33/79 (41%), Gaps = 3/79 (3%)

Query: 66   GYANGSGYGSPNSAFGAQA--GQYTYGQGTYGAAAYGTSSYTAQEYGAGTYGASSTTSTG 123
            G +  SG G   S  G     GQ+  G   + ++    S  + Q  G G YG+ S  STG
Sbjct: 1159 GSSQSSGCGQHESGSGPTTSFGQHVSGSDNFSSSGQHISD-SGQSTGFGQYGSGSGQSTG 1217

Query: 124  RSSQSSSQQFSGIGRSGQQ 142
                 S Q  SG    G+Q
Sbjct: 1218 LGQGESQQVESGSTVHGRQ 1236



 Score = 32.7 bits (73), Expect = 0.18
 Identities = 22/90 (24%), Positives = 32/90 (35%)

Query: 41   RLRGVKDGGRRDSASYRDRSETDRAGYANGSGYGSPNSAFGAQAGQYTYGQGTYGAAAYG 100
            R  G +  G  + +     S   +  ++ G  +G   S  G          GT       
Sbjct: 1794 RTTGRRSSGHSEYSDSEGHSGFSQRPHSRGHTHGQAGSQHGESESIVDERHGTTHGQTGD 1853

Query: 101  TSSYTAQEYGAGTYGASSTTSTGRSSQSSS 130
            TS ++   +G  T   SSTT   RS  S S
Sbjct: 1854 TSGHSQSGHGQSTQSGSSTTGRRRSGHSES 1883



 Score = 28.9 bits (63), Expect = 2.6
 Identities = 32/109 (29%), Positives = 44/109 (40%), Gaps = 24/109 (22%)

Query: 43   RGVKDGGRRDSA-------------SYRDRSETDRAGYANGSGYGSPNSAFGAQAGQYTY 89
            RG +  GRR S              S+R +S+    G A GS +G   S    + G  T+
Sbjct: 1412 RGSRTTGRRGSGHSESSDSEVHSGGSHRPQSQEQTHGQA-GSQHGESGSTVHGRHGT-TH 1469

Query: 90   GQGTYGAAAYGTSSYTAQEYGAGTYGASSTT---STGRSSQSSSQQFSG 135
            GQ         T+ +    +G  T   SSTT    +G S  S S+  SG
Sbjct: 1470 GQ------TGDTTRHAHYHHGKSTQRGSSTTGRRGSGHSESSDSEVHSG 1512



 Score = 28.1 bits (61), Expect = 4.4
 Identities = 32/117 (27%), Positives = 51/117 (43%), Gaps = 11/117 (9%)

Query: 51   RDSASYRDRSETDRAGYANGSGYGSPNSAFGA---QAGQYTYG-QGTYGAAAYGTSSYTA 106
            R  +S+ + S+++    A+ +  G  +S  G+   Q+G   +G QGT       T+ +  
Sbjct: 2175 RQRSSHSESSDSEVHSEASPTHSGHTHSQAGSRHGQSGSSGHGRQGTTHGQTGDTTRHAH 2234

Query: 107  QEYGAGTYGASSTT---STGRSSQSSSQ--QFSGIGRSGQQPQPLMSQQFAQPPGAT 158
              YG  T   S TT    +G S  S S+   +     SG       SQQ  + PG+T
Sbjct: 2235 YGYGQSTQRGSRTTGRRGSGHSESSDSEVHSWGSHTHSGHIQGQAGSQQ--RQPGST 2289


>gi|4758138 DEAD (Asp-Glu-Ala-Asp) box polypeptide 5 [Homo sapiens]
          Length = 614

 Score = 43.5 bits (101), Expect = 1e-04
 Identities = 52/175 (29%), Positives = 71/175 (40%), Gaps = 40/175 (22%)

Query: 1   MQLVDHRGGGGGGGKGGRSRYRTTSSANNPNLMYQDECDRRLRGVKDGGRRDSASYRDRS 60
           +QLV+ RG G   G+GG               M  D  DR   G + G      ++RDR 
Sbjct: 472 LQLVEDRGSGRSRGRGG---------------MKDDRRDRYSAGKRGGFN----TFRDRE 512

Query: 61  ETDRAGYANGSGYGS-PNSAFGAQAGQYTYGQGTYGAAAYGTSSYTAQEYGAG---TYGA 116
             DR       GY S     FGA+        G Y AA Y   S+ +    AG   ++  
Sbjct: 513 NYDR-------GYSSLLKRDFGAKT-----QNGVYSAANYTNGSFGSNFVSAGIQTSFRT 560

Query: 117 SSTTSTGRSSQSSSQQFSGIGRSGQQPQPLMSQQ-FAQP-PGATNMIGYMGQTAY 169
            + T T ++   S+QQ+   G +       M+QQ +A P   A  MIGY   T Y
Sbjct: 561 GNPTGTYQNGYDSTQQY---GSNVPNMHNGMNQQAYAYPATAAAPMIGYPMPTGY 612


>gi|40068464 AT rich interactive domain 1B (SWI1-like) isoform 2
           [Homo sapiens]
          Length = 2191

 Score = 43.5 bits (101), Expect = 1e-04
 Identities = 51/183 (27%), Positives = 65/183 (35%), Gaps = 45/183 (24%)

Query: 8   GGGGGGGKGGRSRYRTTSSANNPNLMYQDECDRRLRGVKDGGRRDSASYRDRSETDRAGY 67
           GGGGGGG GG                          G   GG    A          AG 
Sbjct: 249 GGGGGGGGGGGG------------------------GSGGGGGGGGAG---------AGG 275

Query: 68  ANGSGYGSPNSAFGAQAGQYTYGQGTYG--AAAYGTSSYTAQE-----YGAGTYGASSTT 120
           A      +  +A  A AG    G G YG  +A YG  S   Q+      G G  GA+S +
Sbjct: 276 AGAGAVAAAAAAAAAAAG--GGGGGGYGGSSAGYGVLSSPRQQGGGMMMGPGGGGAASLS 333

Query: 121 STGRSSQSSS-QQFSGIGRSGQQPQPLMSQQFAQPPGATNMIGYMGQTAYQYPPPPPPPP 179
                S +   Q+F+G  +      P ++Q    P  +  M  Y G       P  PPPP
Sbjct: 334 KAAAGSAAGGFQRFAGQNQHPSGATPTLNQLLTSP--SPMMRSYGGSYPEYSSPSAPPPP 391

Query: 180 PSR 182
           PS+
Sbjct: 392 PSQ 394



 Score = 42.0 bits (97), Expect = 3e-04
 Identities = 41/178 (23%), Positives = 59/178 (33%), Gaps = 34/178 (19%)

Query: 8   GGGGGGGKGGRSRYRTTSSANNPNLMYQDECDRRLRGVKDGGRRDSASYRDRSETDRAGY 67
           GGGGGGG GG         A                    G    + +    +    AG 
Sbjct: 252 GGGGGGGGGGSGGGGGGGGAG-----------------AGGAGAGAVAAAAAAAAAAAGG 294

Query: 68  ANGSGYGSPNSAFGAQAGQYTYGQGTYGAAAYGTSSYTAQEYGAGTYGASSTTSTGRSSQ 127
             G GYG  ++ +G  +     G G                 G G  GA+S +     S 
Sbjct: 295 GGGGGYGGSSAGYGVLSSPRQQGGGMM--------------MGPGGGGAASLSKAAAGSA 340

Query: 128 SSS-QQFSGIGRSGQQPQPLMSQQFAQPPGATNMIG--YMGQTAYQYPPPPPPPPPSR 182
           +   Q+F+G  +      P ++Q    P       G  Y   ++   PPPPP  P S+
Sbjct: 341 AGGFQRFAGQNQHPSGATPTLNQLLTSPSPMMRSYGGSYPEYSSPSAPPPPPSQPQSQ 398


>gi|40068466 AT rich interactive domain 1B (SWI1-like) isoform 1
           [Homo sapiens]
          Length = 2231

 Score = 43.5 bits (101), Expect = 1e-04
 Identities = 51/183 (27%), Positives = 65/183 (35%), Gaps = 45/183 (24%)

Query: 8   GGGGGGGKGGRSRYRTTSSANNPNLMYQDECDRRLRGVKDGGRRDSASYRDRSETDRAGY 67
           GGGGGGG GG                          G   GG    A          AG 
Sbjct: 249 GGGGGGGGGGGG------------------------GSGGGGGGGGAG---------AGG 275

Query: 68  ANGSGYGSPNSAFGAQAGQYTYGQGTYG--AAAYGTSSYTAQE-----YGAGTYGASSTT 120
           A      +  +A  A AG    G G YG  +A YG  S   Q+      G G  GA+S +
Sbjct: 276 AGAGAVAAAAAAAAAAAG--GGGGGGYGGSSAGYGVLSSPRQQGGGMMMGPGGGGAASLS 333

Query: 121 STGRSSQSSS-QQFSGIGRSGQQPQPLMSQQFAQPPGATNMIGYMGQTAYQYPPPPPPPP 179
                S +   Q+F+G  +      P ++Q    P  +  M  Y G       P  PPPP
Sbjct: 334 KAAAGSAAGGFQRFAGQNQHPSGATPTLNQLLTSP--SPMMRSYGGSYPEYSSPSAPPPP 391

Query: 180 PSR 182
           PS+
Sbjct: 392 PSQ 394



 Score = 42.0 bits (97), Expect = 3e-04
 Identities = 41/178 (23%), Positives = 59/178 (33%), Gaps = 34/178 (19%)

Query: 8   GGGGGGGKGGRSRYRTTSSANNPNLMYQDECDRRLRGVKDGGRRDSASYRDRSETDRAGY 67
           GGGGGGG GG         A                    G    + +    +    AG 
Sbjct: 252 GGGGGGGGGGSGGGGGGGGAG-----------------AGGAGAGAVAAAAAAAAAAAGG 294

Query: 68  ANGSGYGSPNSAFGAQAGQYTYGQGTYGAAAYGTSSYTAQEYGAGTYGASSTTSTGRSSQ 127
             G GYG  ++ +G  +     G G                 G G  GA+S +     S 
Sbjct: 295 GGGGGYGGSSAGYGVLSSPRQQGGGMM--------------MGPGGGGAASLSKAAAGSA 340

Query: 128 SSS-QQFSGIGRSGQQPQPLMSQQFAQPPGATNMIG--YMGQTAYQYPPPPPPPPPSR 182
           +   Q+F+G  +      P ++Q    P       G  Y   ++   PPPPP  P S+
Sbjct: 341 AGGFQRFAGQNQHPSGATPTLNQLLTSPSPMMRSYGGSYPEYSSPSAPPPPPSQPQSQ 398


>gi|40068462 AT rich interactive domain 1B (SWI1-like) isoform 3
           [Homo sapiens]
          Length = 2178

 Score = 43.5 bits (101), Expect = 1e-04
 Identities = 51/183 (27%), Positives = 65/183 (35%), Gaps = 45/183 (24%)

Query: 8   GGGGGGGKGGRSRYRTTSSANNPNLMYQDECDRRLRGVKDGGRRDSASYRDRSETDRAGY 67
           GGGGGGG GG                          G   GG    A          AG 
Sbjct: 249 GGGGGGGGGGGG------------------------GSGGGGGGGGAG---------AGG 275

Query: 68  ANGSGYGSPNSAFGAQAGQYTYGQGTYG--AAAYGTSSYTAQE-----YGAGTYGASSTT 120
           A      +  +A  A AG    G G YG  +A YG  S   Q+      G G  GA+S +
Sbjct: 276 AGAGAVAAAAAAAAAAAG--GGGGGGYGGSSAGYGVLSSPRQQGGGMMMGPGGGGAASLS 333

Query: 121 STGRSSQSSS-QQFSGIGRSGQQPQPLMSQQFAQPPGATNMIGYMGQTAYQYPPPPPPPP 179
                S +   Q+F+G  +      P ++Q    P  +  M  Y G       P  PPPP
Sbjct: 334 KAAAGSAAGGFQRFAGQNQHPSGATPTLNQLLTSP--SPMMRSYGGSYPEYSSPSAPPPP 391

Query: 180 PSR 182
           PS+
Sbjct: 392 PSQ 394



 Score = 42.0 bits (97), Expect = 3e-04
 Identities = 41/178 (23%), Positives = 59/178 (33%), Gaps = 34/178 (19%)

Query: 8   GGGGGGGKGGRSRYRTTSSANNPNLMYQDECDRRLRGVKDGGRRDSASYRDRSETDRAGY 67
           GGGGGGG GG         A                    G    + +    +    AG 
Sbjct: 252 GGGGGGGGGGSGGGGGGGGAG-----------------AGGAGAGAVAAAAAAAAAAAGG 294

Query: 68  ANGSGYGSPNSAFGAQAGQYTYGQGTYGAAAYGTSSYTAQEYGAGTYGASSTTSTGRSSQ 127
             G GYG  ++ +G  +     G G                 G G  GA+S +     S 
Sbjct: 295 GGGGGYGGSSAGYGVLSSPRQQGGGMM--------------MGPGGGGAASLSKAAAGSA 340

Query: 128 SSS-QQFSGIGRSGQQPQPLMSQQFAQPPGATNMIG--YMGQTAYQYPPPPPPPPPSR 182
           +   Q+F+G  +      P ++Q    P       G  Y   ++   PPPPP  P S+
Sbjct: 341 AGGFQRFAGQNQHPSGATPTLNQLLTSPSPMMRSYGGSYPEYSSPSAPPPPPSQPQSQ 398


>gi|57864582 hornerin [Homo sapiens]
          Length = 2850

 Score = 43.1 bits (100), Expect = 1e-04
 Identities = 33/102 (32%), Positives = 46/102 (45%), Gaps = 7/102 (6%)

Query: 49   GRRDSASYRDRSETDR-AGYANGSGYGSPNSAFGAQAGQYTYGQGTYGAAAYGTSSYTAQ 107
            GR  S S R  S     +G    SG+G   S+ G  +    +G G+  ++ YG     + 
Sbjct: 1612 GRHGSGSGRSSSSGQHGSGLGESSGFGHHESSSGQSSSYSQHGSGSGHSSGYGQHGSRSG 1671

Query: 108  EYGAGTYGASSTTSTGRSSQ--SSSQQFSGIGR----SGQQP 143
            +   G    SS+ S+ R  Q  S S+Q SG GR    SGQ P
Sbjct: 1672 QSSRGERHGSSSRSSSRYGQHGSGSRQSSGHGRQGSGSGQSP 1713



 Score = 42.0 bits (97), Expect = 3e-04
 Identities = 30/95 (31%), Positives = 42/95 (44%), Gaps = 3/95 (3%)

Query: 49   GRRDSASYRDRSETDRA-GYANGSGYGSPNSAFGAQAGQYTYGQGTYGAAAYGTSSYTAQ 107
            GR  S S R  S      G    SG+G   S+ G  +    +G G+  ++ YG     + 
Sbjct: 2082 GRHGSGSGRSSSSGQHGPGLGESSGFGHHESSSGQSSSYSQHGSGSGHSSGYGQHGSRSG 2141

Query: 108  EYGAGTYGASSTTSTGRSSQ--SSSQQFSGIGRSG 140
            +   G    SS+ S+ R  Q  S S+Q SG GR G
Sbjct: 2142 QSSRGERHGSSSGSSSRYGQHGSGSRQSSGHGRQG 2176



 Score = 40.8 bits (94), Expect = 7e-04
 Identities = 32/102 (31%), Positives = 45/102 (44%), Gaps = 7/102 (6%)

Query: 49   GRRDSASYRDRSETDR-AGYANGSGYGSPNSAFGAQAGQYTYGQGTYGAAAYGTSSYTAQ 107
            GR  S S R  S     +G    SG+G   S+ G  +    +G G+  ++ YG     + 
Sbjct: 2552 GRHGSGSGRSSSSGQHGSGLGESSGFGHHESSSGQSSSYSQHGSGSGHSSGYGQHGSRSG 2611

Query: 108  EYGAGTYGASSTTSTGRSSQ--SSSQQFSGIGR----SGQQP 143
            +   G    SS+ S+    Q  S S+Q SG GR    SGQ P
Sbjct: 2612 QSSRGERHGSSSGSSSHYGQHGSGSRQSSGHGRQGSGSGQSP 2653



 Score = 40.4 bits (93), Expect = 9e-04
 Identities = 29/95 (30%), Positives = 42/95 (44%), Gaps = 3/95 (3%)

Query: 49   GRRDSASYRDRSETDR-AGYANGSGYGSPNSAFGAQAGQYTYGQGTYGAAAYGTSSYTAQ 107
            GR  S S R  S     +G    SG+G   S+ G  +    +G G+  ++ YG     + 
Sbjct: 1142 GRHGSGSGRSSSSGQHGSGLGESSGFGHHESSSGQSSSYSQHGSGSGHSSGYGQHGSRSG 1201

Query: 108  EYGAGTYGASSTTSTGRSSQ--SSSQQFSGIGRSG 140
            +   G    SS+ S+    Q  S S+Q SG GR G
Sbjct: 1202 QSSRGERHGSSSGSSSHYGQHGSGSRQSSGHGRQG 1236



 Score = 37.0 bits (84), Expect = 0.009
 Identities = 29/102 (28%), Positives = 47/102 (46%), Gaps = 6/102 (5%)

Query: 48  GGRRDSASYRDRSETDRAGYANGSGYGSPNSAFGAQAGQYTYGQGTYGAAAYGT-SSYTA 106
           G     +SY        +G    SG+G   S  G  +G   +G G+  +++ G   S + 
Sbjct: 323 GQHGSGSSYSYSRGHYESGSGQTSGFGQHESGSGQSSGYSKHGSGSGHSSSQGQHGSTSG 382

Query: 107 QEYGAGTYGASSTTSTGRSS-QSSSQQFSGIGR----SGQQP 143
           Q   +G +G+SS  S+     +S+S+  SG G+    SGQ P
Sbjct: 383 QASSSGQHGSSSRQSSSYGQHESASRHSSGRGQHSSGSGQSP 424



 Score = 37.0 bits (84), Expect = 0.009
 Identities = 38/162 (23%), Positives = 61/162 (37%), Gaps = 15/162 (9%)

Query: 10  GGGGGKGGRSRYRTTSSANNPNLMYQDECDRRLRGVKDGGRRDSASYRDRSETDR-AGYA 68
           G   G+   S    +SS  + +    +       G    GR  S S +      R +G  
Sbjct: 845 GSTSGQSSSSGQHDSSSGQSSSYGQHESASHHASG---RGRHGSGSGQSPGHGQRGSGSG 901

Query: 69  NGSGYGSPNSAFGAQAGQYTYGQGTYGAAAYGTSSYTAQEYGAGTYGASSTTSTGRSSQS 128
               YG   S  G  +    +G G+  ++ +G  S + Q  G   +G+        S  S
Sbjct: 902 QSPSYGRHGSGSGRSSSSGRHGSGSGQSSGFGHKSSSGQSSGYTQHGSG-------SGHS 954

Query: 129 SSQQFSGIGRSGQQPQPLMSQQFAQPPGATNMIGYMGQTAYQ 170
           SS +  G  RSGQ  +   S+Q     G+++  G  G  + Q
Sbjct: 955 SSYEQHG-SRSGQSSR---SEQHGSSSGSSSSYGQHGSGSRQ 992



 Score = 36.6 bits (83), Expect = 0.012
 Identities = 27/95 (28%), Positives = 43/95 (45%), Gaps = 3/95 (3%)

Query: 49  GRRDSASYRDRS-ETDRAGYANGSGYGSPNSAFGAQAGQYTYGQGTYGAAAYGTSSYTAQ 107
           G+  S S +  S +T  +G    SG+    S+ G  +G   +G G+  ++ YG     + 
Sbjct: 206 GQHGSGSGQSSSNDTHGSGSGQSSGFSQHKSSSGQSSGYSQHGSGSGHSSGYGQHGSRSG 265

Query: 108 EYGAGTYGASSTTSTGRSSQ--SSSQQFSGIGRSG 140
           +   G    SS+ S+    Q  S S+Q  G GR G
Sbjct: 266 QSSRGERHRSSSGSSSSYGQHGSGSRQSLGHGRQG 300



 Score = 35.4 bits (80), Expect = 0.028
 Identities = 27/102 (26%), Positives = 48/102 (47%), Gaps = 15/102 (14%)

Query: 49   GRRDSASYRDRSETDRAGYANGSGYGSPNSAFGAQAGQYTYGQGTYGAAAYGTSSYTAQE 108
            G  +S+S +  S +    + +GSG+ S     G+++GQ + G+       +G+SS ++  
Sbjct: 1168 GHHESSSGQSSSYSQ---HGSGSGHSSGYGQHGSRSGQSSRGE------RHGSSSGSSSH 1218

Query: 109  YGAGTYGASSTTSTGRS------SQSSSQQFSGIGRSGQQPQ 144
            YG    G+  ++  GR       S S  +  SG+G S    Q
Sbjct: 1219 YGQHGSGSRQSSGHGRQGSGSGHSPSRGRHGSGLGHSSSHGQ 1260



 Score = 35.4 bits (80), Expect = 0.028
 Identities = 43/178 (24%), Positives = 71/178 (39%), Gaps = 18/178 (10%)

Query: 10   GGGGGKGGRSRYRTTSSANNPNLMYQDECDRRLRGVKD--GGRRDSASYRD---RSETDR 64
            G G G    S    + S  +    + +    +  G      G   S+SY     RS    
Sbjct: 1379 GSGSGWSSSSGRHGSGSGQSSGFGHHESSSWQSSGCTQHGSGSGHSSSYEQHGSRSGQSS 1438

Query: 65   AGYANGSGYGSPNSAFG--AQAGQYTYGQGTYGAAAYGTSSYTAQEYGAGT--------Y 114
             G  +GS  GS +S++G      + + G G +G+ +  + S +   +G+G+        Y
Sbjct: 1439 RGERHGSSSGS-SSSYGQHGSGSRQSLGHGQHGSGSGQSPSPSRGRHGSGSGQSSSYSPY 1497

Query: 115  GASSTTSTGRSS-QSSSQQFSGIG-RSGQQPQPLMSQQFAQPPGATNMIGYMGQTAYQ 170
            G+ S  S+ R   +S S   SG+G R  +  Q     Q     G ++  G  G T+ Q
Sbjct: 1498 GSGSGWSSSRGPYESGSSHSSGLGHRESRSGQSSGYGQHGSSSGHSSTHGQHGSTSGQ 1555



 Score = 35.0 bits (79), Expect = 0.036
 Identities = 36/136 (26%), Positives = 55/136 (40%), Gaps = 18/136 (13%)

Query: 7    RGGGGGGGKGGRSRYRTTSSANNPNLMYQDECDRRLRGVKDGGRRDSASYRDRSETDRAG 66
            R G G G       YR+ S  ++             RG  + G   S+    R    R+G
Sbjct: 1013 RHGSGSGQSSSYGPYRSGSGWSSS------------RGPYESGSGHSSGLGHRES--RSG 1058

Query: 67   YANGSGYGSPNSAFGAQAGQY--TYGQGTYGAAAYGTSSYTAQEYGAGTYGASSTTSTGR 124
             ++G G    +S   +  GQ+  T GQ +     +G SS  +  +G    G+S ++  GR
Sbjct: 1059 QSSGYGQHGSSSGHSSTHGQHGSTSGQSS-SCGQHGASSGQSSSHGQHGSGSSQSSGYGR 1117

Query: 125  SSQSSSQQFSGIGRSG 140
               S S Q  G G+ G
Sbjct: 1118 QG-SGSGQSPGHGQRG 1132



 Score = 35.0 bits (79), Expect = 0.036
 Identities = 36/138 (26%), Positives = 56/138 (40%), Gaps = 7/138 (5%)

Query: 6    HRGGGGGGGKGGRSRYRTTSSANNPNLMYQDECD-RRLRGVKDGGRRDSASYRDRSETDR 64
            H  G G      R R+ + S  ++    Y         RG  + G   S+    R    R
Sbjct: 1469 HGSGSGQSPSPSRGRHGSGSGQSSSYSPYGSGSGWSSSRGPYESGSSHSSGLGHRES--R 1526

Query: 65   AGYANGSGYGSPNSAFGAQAGQY--TYGQGTYGAAAYGTSSYTAQEYGAGTYGASSTTST 122
            +G ++G G    +S   +  GQ+  T GQ +     +G SS  +  +G    G+S ++  
Sbjct: 1527 SGQSSGYGQHGSSSGHSSTHGQHGSTSGQSS-SCGQHGASSGQSSSHGQHGSGSSQSSGY 1585

Query: 123  GRSSQSSSQQFSGIGRSG 140
            GR   S S Q  G G+ G
Sbjct: 1586 GRQG-SGSGQSPGHGQRG 1602



 Score = 34.7 bits (78), Expect = 0.047
 Identities = 43/178 (24%), Positives = 71/178 (39%), Gaps = 18/178 (10%)

Query: 10   GGGGGKGGRSRYRTTSSANNPNLMYQDECDRRLRGVKD--GGRRDSASYRD---RSETDR 64
            G G G    S    + S  +    + +    +  G      G   S+SY     RS    
Sbjct: 2319 GSGSGWSSSSGRHGSGSGQSSGFGHHESSSWQSSGYTQHGSGSGHSSSYEQHGSRSGQSS 2378

Query: 65   AGYANGSGYGSPNSAFG--AQAGQYTYGQGTYGAAAYGTSSYTAQEYGAGT--------Y 114
             G  +GS  GS +S++G      + + G G +G+ +  + S +   +G+G+        Y
Sbjct: 2379 RGERHGSSSGS-SSSYGQHGSGSRQSLGHGQHGSGSGQSPSPSRGRHGSGSGQSSSYSPY 2437

Query: 115  GASSTTSTGRSS-QSSSQQFSGIG-RSGQQPQPLMSQQFAQPPGATNMIGYMGQTAYQ 170
            G+ S  S+ R   +S S   SG+G R  +  Q     Q     G ++  G  G T+ Q
Sbjct: 2438 GSGSGWSSSRGPYESGSGHSSGLGHRESRSGQSSGYGQHGSSSGHSSTHGQHGSTSGQ 2495



 Score = 34.7 bits (78), Expect = 0.047
 Identities = 36/138 (26%), Positives = 56/138 (40%), Gaps = 7/138 (5%)

Query: 6    HRGGGGGGGKGGRSRYRTTSSANNPNLMYQDECD-RRLRGVKDGGRRDSASYRDRSETDR 64
            H  G G      R R+ + S  ++    Y         RG  + G   S+    R    R
Sbjct: 2409 HGSGSGQSPSPSRGRHGSGSGQSSSYSPYGSGSGWSSSRGPYESGSGHSSGLGHRES--R 2466

Query: 65   AGYANGSGYGSPNSAFGAQAGQY--TYGQGTYGAAAYGTSSYTAQEYGAGTYGASSTTST 122
            +G ++G G    +S   +  GQ+  T GQ +     +G SS  +  +G    G+S ++  
Sbjct: 2467 SGQSSGYGQHGSSSGHSSTHGQHGSTSGQSS-SCGQHGASSGQSSSHGQHGSGSSQSSGY 2525

Query: 123  GRSSQSSSQQFSGIGRSG 140
            GR   S S Q  G G+ G
Sbjct: 2526 GRQG-SGSGQSPGHGQRG 2542



 Score = 34.3 bits (77), Expect = 0.061
 Identities = 39/159 (24%), Positives = 61/159 (38%), Gaps = 26/159 (16%)

Query: 2    QLVDHRGGGGGGGKGGRSRYRTTSSANNPNLMYQDECDRRLRGVKDGGRRDSASYRDR-- 59
            Q   H   G G  +      + + S  +P+           RG    G   S+SY     
Sbjct: 1802 QSSSHGQHGSGSSQSSSYGQQGSGSGQSPS-----------RGRHGSGSGHSSSYGQHGS 1850

Query: 60   -----SETDRAGYANG--SGYGSPNSAFGAQAGQYTYGQGTYGAAAYGTSSYTAQEYGAG 112
                 S + R G  +G  SG+G   S+    +G   +G G+  +++Y      + +   G
Sbjct: 1851 GSGWSSSSGRHGSGSGQSSGFGHHESSSWQSSGYTQHGSGSGHSSSYEQHGSRSGQSSRG 1910

Query: 113  TYGASSTTSTGRSSQ--SSSQQFSGIGR----SGQQPQP 145
                SS+ S+    Q  S S+Q  G G+    SGQ P P
Sbjct: 1911 EQHGSSSGSSSSYGQHGSGSRQSLGHGQHGSGSGQSPSP 1949



 Score = 33.9 bits (76), Expect = 0.080
 Identities = 42/156 (26%), Positives = 61/156 (39%), Gaps = 30/156 (19%)

Query: 6    HRGGGGGGGKG-GRSRYRTTSSANNPNLMYQDECDRRLRGVKDGGRRDSASYRDR----- 59
            HRG G     G GR       S  +P+           RG    G   S+SY        
Sbjct: 1338 HRGSGSSQSSGYGR---HGAGSGQSPS-----------RGRHGSGSGHSSSYGQHGSGSG 1383

Query: 60   --SETDRAGYANG--SGYGSPNSAFGAQAGQYTYGQGTYGAAAYGTSSYTAQEYGAGTYG 115
              S + R G  +G  SG+G   S+    +G   +G G+  +++Y      + +   G   
Sbjct: 1384 WSSSSGRHGSGSGQSSGFGHHESSSWQSSGCTQHGSGSGHSSSYEQHGSRSGQSSRGERH 1443

Query: 116  ASSTTSTGRSSQ--SSSQQFSGIGR----SGQQPQP 145
             SS+ S+    Q  S S+Q  G G+    SGQ P P
Sbjct: 1444 GSSSGSSSSYGQHGSGSRQSLGHGQHGSGSGQSPSP 1479



 Score = 33.9 bits (76), Expect = 0.080
 Identities = 39/159 (24%), Positives = 61/159 (38%), Gaps = 26/159 (16%)

Query: 2    QLVDHRGGGGGGGKGGRSRYRTTSSANNPNLMYQDECDRRLRGVKDGGRRDSASYRDR-- 59
            Q   H   G G  +      + + S  +P+           RG    G   S+SY     
Sbjct: 2272 QSSSHGQHGSGSSQSSSYGQQGSGSGQSPS-----------RGRHGSGSGHSSSYGQHGS 2320

Query: 60   -----SETDRAGYANG--SGYGSPNSAFGAQAGQYTYGQGTYGAAAYGTSSYTAQEYGAG 112
                 S + R G  +G  SG+G   S+    +G   +G G+  +++Y      + +   G
Sbjct: 2321 GSGWSSSSGRHGSGSGQSSGFGHHESSSWQSSGYTQHGSGSGHSSSYEQHGSRSGQSSRG 2380

Query: 113  TYGASSTTSTGRSSQ--SSSQQFSGIGR----SGQQPQP 145
                SS+ S+    Q  S S+Q  G G+    SGQ P P
Sbjct: 2381 ERHGSSSGSSSSYGQHGSGSRQSLGHGQHGSGSGQSPSP 2419



 Score = 33.5 bits (75), Expect = 0.10
 Identities = 34/114 (29%), Positives = 53/114 (46%), Gaps = 12/114 (10%)

Query: 36  DECDRRLRGVKDGGRRDSASYRDRSETDRAGYANGSGYGSPNSAFGAQ--AGQYTYGQGT 93
           D   R +RG    G  +S S R   + D +G  N   Y   +S++G Q      + G+G 
Sbjct: 138 DSYSRNVRGSLKPGT-ESISRRLSFQRDFSGQHNS--YSGQSSSYGEQNSDSHQSSGRGQ 194

Query: 94  YGAAAYGTSSYTAQEYGAG------TYGASSTTSTGRSS-QSSSQQFSGIGRSG 140
            G+ +  + +Y     G+G      T+G+ S  S+G S  +SSS Q SG  + G
Sbjct: 195 CGSGSGQSPNYGQHGSGSGQSSSNDTHGSGSGQSSGFSQHKSSSGQSSGYSQHG 248



 Score = 33.5 bits (75), Expect = 0.10
 Identities = 36/134 (26%), Positives = 54/134 (40%), Gaps = 17/134 (12%)

Query: 8   GGGGGGGKGGRSRYRTTSSANNPNLMYQDECDRRLRGVKDGGRRDSASYRDRSETDRAGY 67
           G G   G G  S Y    S ++ +  Y+          K G R   +S   RSE   +  
Sbjct: 700 GFGHKSGSGQSSGYSQHGSGSSHSSGYR----------KHGSRSGQSS---RSEQHGSSS 746

Query: 68  ANGSGYGSPNSAFGAQAGQYTYGQGTYGAAA---YGTSSYTAQEYGAGTYGASSTTSTGR 124
              S YG   S     +G    G G+  + +   +G+SS  +  +G    G S ++S G 
Sbjct: 747 GLSSSYGQHGSGSHQSSGHGRQGSGSGHSPSRVRHGSSSGHSSSHGQHGSGTSCSSSCGH 806

Query: 125 SSQSSSQQFSGIGR 138
             +S S Q SG G+
Sbjct: 807 -YESGSGQASGFGQ 819



 Score = 33.5 bits (75), Expect = 0.10
 Identities = 27/84 (32%), Positives = 38/84 (45%), Gaps = 9/84 (10%)

Query: 65   AGYANGSGYGSPNSAFGAQAGQYTYGQGTYGAAAYGT-SSYTAQEYGAGTYGASSTTSTG 123
            +G +  SGYG   S  G   G    G G+  + +YG   S + +   +G +G+    S+G
Sbjct: 1107 SGSSQSSGYGRQGSGSGQSPGHGQRGSGSRQSPSYGRHGSGSGRSSSSGQHGSGLGESSG 1166

Query: 124  ------RSSQSS--SQQFSGIGRS 139
                   S QSS  SQ  SG G S
Sbjct: 1167 FGHHESSSGQSSSYSQHGSGSGHS 1190



 Score = 33.5 bits (75), Expect = 0.10
 Identities = 27/84 (32%), Positives = 38/84 (45%), Gaps = 9/84 (10%)

Query: 65   AGYANGSGYGSPNSAFGAQAGQYTYGQGTYGAAAYGT-SSYTAQEYGAGTYGASSTTSTG 123
            +G +  SGYG   S  G   G    G G+  + +YG   S + +   +G +G+    S+G
Sbjct: 1577 SGSSQSSGYGRQGSGSGQSPGHGQRGSGSRQSPSYGRHGSGSGRSSSSGQHGSGLGESSG 1636

Query: 124  ------RSSQSS--SQQFSGIGRS 139
                   S QSS  SQ  SG G S
Sbjct: 1637 FGHHESSSGQSSSYSQHGSGSGHS 1660



 Score = 33.5 bits (75), Expect = 0.10
 Identities = 36/145 (24%), Positives = 57/145 (39%), Gaps = 15/145 (10%)

Query: 7    RGGGGGGGKGGRSRYRTTSSANNPNLMYQDECDRRLRGVKDGGRRDSASYRDRSETDRAG 66
            R G G G   G   + ++S  ++    +           + G R   +S   R E   + 
Sbjct: 1860 RHGSGSGQSSGFGHHESSSWQSSGYTQHGSGSGHSSSYEQHGSRSGQSS---RGEQHGSS 1916

Query: 67   YANGSGYGSPNSAFGAQAGQYTYGQGTYGAAA-----YGTSSYTAQEYGAGTYGASSTTS 121
              + S YG   S      G   +G G+  + +     +G+ S  +  Y  G YG+ S  S
Sbjct: 1917 SGSSSSYGQHGSGSRQSLGHGQHGSGSGQSPSPSRGRHGSGSGQSSSY--GPYGSGSGWS 1974

Query: 122  TGRSS-QSSSQQFSGIG----RSGQ 141
            + R   +S S   SG+G    RSGQ
Sbjct: 1975 SSRGPYESGSGHSSGLGHRESRSGQ 1999



 Score = 33.5 bits (75), Expect = 0.10
 Identities = 42/165 (25%), Positives = 64/165 (38%), Gaps = 32/165 (19%)

Query: 7    RGGGGGGGKGGRSRYRTTSSANNPNLMY------QDECDRRLRGVKDGGRRDSASYRDRS 60
            RG   G   G  S Y    S +  +L +        +     RG    G   S+SY    
Sbjct: 1909 RGEQHGSSSGSSSSYGQHGSGSRQSLGHGQHGSGSGQSPSPSRGRHGSGSGQSSSYGPYG 1968

Query: 61   E-----TDRAGYANGSGYGSPNSAFGAQAGQYT-YGQ-----------GTYGAAA----- 98
                  + R  Y +GSG+ S      +++GQ + YGQ           G +G+A+     
Sbjct: 1969 SGSGWSSSRGPYESGSGHSSGLGHRESRSGQSSGYGQHGSSSGHSSTHGQHGSASGQSSS 2028

Query: 99   ---YGTSSYTAQEYGAGTYGASSTTSTGRSSQSSSQQFSGIGRSG 140
               +G SS  +  +G    G+S ++  GR   S S Q  G G+ G
Sbjct: 2029 CGQHGASSGQSSSHGQHGSGSSQSSGYGRQG-SGSGQSPGHGQRG 2072



 Score = 33.5 bits (75), Expect = 0.10
 Identities = 27/84 (32%), Positives = 38/84 (45%), Gaps = 9/84 (10%)

Query: 65   AGYANGSGYGSPNSAFGAQAGQYTYGQGTYGAAAYGT-SSYTAQEYGAGTYGASSTTSTG 123
            +G +  SGYG   S  G   G    G G+  + +YG   S + +   +G +G+    S+G
Sbjct: 2517 SGSSQSSGYGRQGSGSGQSPGHGQRGSGSRQSPSYGRHGSGSGRSSSSGQHGSGLGESSG 2576

Query: 124  ------RSSQSS--SQQFSGIGRS 139
                   S QSS  SQ  SG G S
Sbjct: 2577 FGHHESSSGQSSSYSQHGSGSGHS 2600



 Score = 33.1 bits (74), Expect = 0.14
 Identities = 42/177 (23%), Positives = 62/177 (35%), Gaps = 20/177 (11%)

Query: 12  GGGKGGRSRYRTTSSANNPNLMYQDECDRRLRGVKDGGRRDSASYRDRSETDRAGYANGS 71
           G G      +  +SS ++              G    G R   S R   +   AG  + S
Sbjct: 458 GSGYSSGFGHHESSSEHSSGYTQHGSGSGHSSGHGQHGSRSGQSSRGERQGSSAG--SSS 515

Query: 72  GYGSPNSAFGAQAGQYTYGQGT----------YGAAAYGTSSYTAQEYGA------GTYG 115
            YG   S      G   +G G+          + + +  +SSY    YG+      G Y 
Sbjct: 516 SYGQHGSGSRQSLGHSRHGSGSGQSPSPSRGRHESGSRQSSSYGPHGYGSGRSSSRGPYE 575

Query: 116 ASSTTSTGRSSQSS-SQQFSGIGRSGQQPQPLMSQ-QFAQPPGATNMIGYMGQTAYQ 170
           + S  S+G   Q S S Q SG G+ G       +  Q     G ++  G  G T+ Q
Sbjct: 576 SGSGHSSGLGHQESRSGQSSGYGQHGSSSGHSSTHGQHGSTSGQSSSCGQHGATSGQ 632



 Score = 33.1 bits (74), Expect = 0.14
 Identities = 37/167 (22%), Positives = 65/167 (38%), Gaps = 10/167 (5%)

Query: 10   GGGGGKGGRSRYRTTSSANNPNLMYQDECDRRLRGVKDGGRRDSASYRDRSETDRAGYAN 69
            G G G+     ++++S  ++    +           + G R   +S   RSE   +   +
Sbjct: 923  GSGSGQSSGFGHKSSSGQSSGYTQHGSGSGHSSSYEQHGSRSGQSS---RSEQHGSSSGS 979

Query: 70   GSGYGSPNSAFGAQAGQYTYGQGTYGAAA-----YGTSSYTAQEYGAGTYGASSTTSTGR 124
             S YG   S      G   +G G+  + +     +G+ S  +  YG    G+  ++S G 
Sbjct: 980  SSSYGQHGSGSRQSLGHGQHGSGSGQSPSPSRGRHGSGSGQSSSYGPYRSGSGWSSSRG- 1038

Query: 125  SSQSSSQQFSGIG-RSGQQPQPLMSQQFAQPPGATNMIGYMGQTAYQ 170
              +S S   SG+G R  +  Q     Q     G ++  G  G T+ Q
Sbjct: 1039 PYESGSGHSSGLGHRESRSGQSSGYGQHGSSSGHSSTHGQHGSTSGQ 1085



 Score = 33.1 bits (74), Expect = 0.14
 Identities = 33/142 (23%), Positives = 55/142 (38%), Gaps = 10/142 (7%)

Query: 7    RGGGGGGGKGGRSRYRTTSSANNPNLMYQDECDRRLRGVKDGGRRDSASYRDRSETDRAG 66
            R   G G +G  S +  +   +   L +     +   G      R     R    +    
Sbjct: 1227 RQSSGHGRQGSGSGHSPSRGRHGSGLGHSSSHGQHGSGSGRSSSRGPYESRSGHSSVFGQ 1286

Query: 67   YANGSGYGSPNSAFGAQAGQYTYGQGTYGAAA--------YGTSSYTAQEYGAGTYGASS 118
            + +GSG+ S  S  G+ +G +   QG +G+ +         G+S+  +  YG    G+S 
Sbjct: 1287 HESGSGHSSAYSQHGSGSGHFC-SQGQHGSTSGQSSTFDQEGSSTGQSSSYGHRGSGSSQ 1345

Query: 119  TTSTGRSSQSSSQQFSGIGRSG 140
            ++  GR    S Q  S  GR G
Sbjct: 1346 SSGYGRHGAGSGQSPSR-GRHG 1366



 Score = 33.1 bits (74), Expect = 0.14
 Identities = 33/123 (26%), Positives = 53/123 (43%), Gaps = 18/123 (14%)

Query: 65   AGYANGSGYGSPNSAFGAQAGQYTYGQGTYGAAAYGT------SSYTAQEYGAGTYGASS 118
            +G +  SGYG   S  G   G    G G+  + +YG        S ++ ++G G  G SS
Sbjct: 2047 SGSSQSSGYGRQGSGSGQSPGHGQRGSGSRQSPSYGRHGSGSGRSSSSGQHGPG-LGESS 2105

Query: 119  -----TTSTGRSSQ-----SSSQQFSGIGRSGQQP-QPLMSQQFAQPPGATNMIGYMGQT 167
                  +S+G+SS      S S   SG G+ G +  Q    ++     G+++  G  G  
Sbjct: 2106 GFGHHESSSGQSSSYSQHGSGSGHSSGYGQHGSRSGQSSRGERHGSSSGSSSRYGQHGSG 2165

Query: 168  AYQ 170
            + Q
Sbjct: 2166 SRQ 2168



 Score = 33.1 bits (74), Expect = 0.14
 Identities = 31/119 (26%), Positives = 48/119 (40%), Gaps = 17/119 (14%)

Query: 67   YANGSGYGSPNSAFGAQAGQYTYGQGTYGAAA--------YGTSSYTAQEYGAGTYGASS 118
            + +GSG+ S  S  G+ +G +   QG +G+ +         G+S+  +  YG    G+S 
Sbjct: 2697 HESGSGHSSAYSQHGSGSGHFC-SQGQHGSTSGQSSTFDQEGSSTGQSSSYGHRGSGSSQ 2755

Query: 119  TTSTGRSSQSSSQQF------SGIGRSGQQPQPLMSQQFAQPPGATNMIGYMGQTAYQY 171
            ++  GR    S Q        SG G+S    Q        Q  G +      GQ  Y Y
Sbjct: 2756 SSGYGRHGAGSGQSLSHGRHGSGSGQSSSYGQ--HGSGSGQSSGYSQHGSGSGQDGYSY 2812



 Score = 30.4 bits (67), Expect = 0.89
 Identities = 24/87 (27%), Positives = 37/87 (42%), Gaps = 6/87 (6%)

Query: 65  AGYANGSGYGSPNSAFGAQAGQYTYGQGTYGAAAYGTSSYTAQEYGAGTYGASSTTSTGR 124
           +G    SG+G   S+    +G   +G G+  ++ +G     + +   G    SS  S+  
Sbjct: 457 SGSGYSSGFGHHESSSEHSSGYTQHGSGSGHSSGHGQHGSRSGQSSRGERQGSSAGSSSS 516

Query: 125 SSQ--SSSQQFSGIGR----SGQQPQP 145
             Q  S S+Q  G  R    SGQ P P
Sbjct: 517 YGQHGSGSRQSLGHSRHGSGSGQSPSP 543



 Score = 30.4 bits (67), Expect = 0.89
 Identities = 41/169 (24%), Positives = 64/169 (37%), Gaps = 12/169 (7%)

Query: 11  GGGGKGGRSRYRTTSSANNPNLMYQDECDRRLRGVKDGGRRDSASYRDRSETDRAGYANG 70
           G G  G  S + +T   +         C +   G   G       +   S         G
Sbjct: 596 GYGQHGSSSGHSSTHGQHGSTSGQSSSCGQH--GATSGQSSSHGQHGSGSSQSSRYGQQG 653

Query: 71  SGYG-SPN-----SAFGAQAGQYTYGQGTYGAAAYGT-SSYTAQEYGAGTYGASSTTSTG 123
           SG G SP+     S FG  +    +G G+  +++ G   S + Q  G G + + S  S+G
Sbjct: 654 SGSGQSPSRGRHGSDFGHSSSYGQHGSGSGWSSSNGPHGSVSGQSSGFG-HKSGSGQSSG 712

Query: 124 RSSQ-SSSQQFSGIGRSGQQP-QPLMSQQFAQPPGATNMIGYMGQTAYQ 170
            S   S S   SG  + G +  Q   S+Q     G ++  G  G  ++Q
Sbjct: 713 YSQHGSGSSHSSGYRKHGSRSGQSSRSEQHGSSSGLSSSYGQHGSGSHQ 761



 Score = 30.0 bits (66), Expect = 1.2
 Identities = 29/88 (32%), Positives = 42/88 (47%), Gaps = 21/88 (23%)

Query: 53   SASYRDRSETDRAGYANGSGYGSPNSAFGAQAGQYTYGQGTYGAAAYGTSSYTAQEYGAG 112
            S+SY  R     +G +  SGYG      GA +GQ +   G +G+ +  +SSY       G
Sbjct: 2743 SSSYGHRG----SGSSQSSGYG----RHGAGSGQ-SLSHGRHGSGSGQSSSY-------G 2786

Query: 113  TYGASSTTSTGRSSQSSSQQFSGIGRSG 140
             +G+ S  S+G      SQ  SG G+ G
Sbjct: 2787 QHGSGSGQSSG-----YSQHGSGSGQDG 2809



 Score = 29.3 bits (64), Expect = 2.0
 Identities = 35/134 (26%), Positives = 52/134 (38%), Gaps = 14/134 (10%)

Query: 16   GGRSRYRTTSSANNPNLMYQDECDRRLRGVKDGGRRDSASYRDRSETDR--AGYANGSGY 73
            G  S Y    S +  +  Y     R   G    G R  +S R  S   +  +G    SG+
Sbjct: 1645 GQSSSYSQHGSGSGHSSGYGQHGSRS--GQSSRGERHGSSSRSSSRYGQHGSGSRQSSGH 1702

Query: 74   GSPNSAFGAQAGQYTYGQGTYGAAAYGTSSYTAQEYGAGTYGASST-TSTGRSSQSS--S 130
            G   S  G    +  +G G   ++++G       ++G+G+  +SS      RS  SS   
Sbjct: 1703 GRQGSGSGQSPSRGRHGSGLGHSSSHG-------QHGSGSGRSSSRGPYESRSGHSSVFG 1755

Query: 131  QQFSGIGRSGQQPQ 144
            Q  SG G S    Q
Sbjct: 1756 QHESGSGHSSAYSQ 1769



 Score = 28.9 bits (63), Expect = 2.6
 Identities = 34/139 (24%), Positives = 55/139 (39%), Gaps = 26/139 (18%)

Query: 9    GGGGGGKGGRSRYRTTSSANNPNLMYQDECDRRLRGVKDGGRRDSASYRDRSETDRAGYA 68
            G G G   G  ++ + S  ++             RG + G    S+S   R     +G  
Sbjct: 2124 GSGSGHSSGYGQHGSRSGQSS-------------RGERHGSSSGSSS---RYGQHGSGSR 2167

Query: 69   NGSGYGSPNSAFGAQAGQYTYGQGTYGAAAYGTSSYTAQEYGAGTYGASST-TSTGRSSQ 127
              SG+G   S  G    +  +G G+  ++++G       ++G+G+  +SS      RS  
Sbjct: 2168 QSSGHGRQGSGSGHSPSRGRHGSGSGHSSSHG-------QHGSGSGRSSSRGPYESRSGH 2220

Query: 128  SS--SQQFSGIGRSGQQPQ 144
            SS   Q  SG G S    Q
Sbjct: 2221 SSVFGQHESGSGHSSAYSQ 2239



 Score = 28.5 bits (62), Expect = 3.4
 Identities = 37/148 (25%), Positives = 59/148 (39%), Gaps = 18/148 (12%)

Query: 7   RGGGGGGGKGGRSRYRTTSSANNPNLMYQD--ECDRRLRGVKDGGRRDSASYRDRSETDR 64
           R G G G    R R+ ++S  ++ +  +     C     G  + G   ++ +        
Sbjct: 767 RQGSGSGHSPSRVRHGSSSGHSSSHGQHGSGTSCSSSC-GHYESGSGQASGFGQHESGSG 825

Query: 65  AGYANGSGYGSPNSAFGAQAGQ-YTYGQ----GTYGAAAYGTSSYTAQE------YGAGT 113
            GY   S +GS +  F +Q     T GQ    G + +++  +SSY   E       G G 
Sbjct: 826 QGY---SQHGSASGHFSSQGRHGSTSGQSSSSGQHDSSSGQSSSYGQHESASHHASGRGR 882

Query: 114 YGASSTTSTGRSSQ-SSSQQFSGIGRSG 140
           +G+ S  S G   + S S Q    GR G
Sbjct: 883 HGSGSGQSPGHGQRGSGSGQSPSYGRHG 910



 Score = 27.3 bits (59), Expect = 7.5
 Identities = 32/140 (22%), Positives = 54/140 (38%), Gaps = 28/140 (20%)

Query: 9    GGGGGGKGGRSRYRTTSSANNPNLMYQDECDRRLRGVKDGGRRDSASYRDRSETDRAGYA 68
            G G G   G  ++ + S  ++             RG + G    S+S+  +  +   G  
Sbjct: 2594 GSGSGHSSGYGQHGSRSGQSS-------------RGERHGSSSGSSSHYGQHGS---GSR 2637

Query: 69   NGSGYGSPNSAFGAQAGQYTYGQGTYGAAAYGTSSYTAQEYGAGTYGASSTTSTGRSSQS 128
              SG+G   S  G    +  +G G   ++++G       ++G+G+ G SS+     S   
Sbjct: 2638 QSSGHGRQGSGSGQSPSRGRHGSGLGHSSSHG-------QHGSGS-GRSSSRGPYESRLG 2689

Query: 129  SSQQF----SGIGRSGQQPQ 144
             S  F    SG G S    Q
Sbjct: 2690 HSSVFGQHESGSGHSSAYSQ 2709


>gi|14043072 heterogeneous nuclear ribonucleoprotein A2/B1 isoform
           B1 [Homo sapiens]
          Length = 353

 Score = 43.1 bits (100), Expect = 1e-04
 Identities = 31/101 (30%), Positives = 36/101 (35%), Gaps = 12/101 (11%)

Query: 5   DHRGGGGGGGKGGRSRYRTTSSANNPNLMYQDECDRRLRGVKDGGRRDSASYRDRSETDR 64
           D RGGGG  G G  S +R  S                 RG  DG           +    
Sbjct: 211 DSRGGGGNFGPGPGSNFRGGSDGYGSG-----------RGFGDGYNGYGGGPGGGNFGGS 259

Query: 65  AGYANG-SGYGSPNSAFGAQAGQYTYGQGTYGAAAYGTSSY 104
            GY  G  GYG     +G Q G Y  G   YG   YG+ +Y
Sbjct: 260 PGYGGGRGGYGGGGPGYGNQGGGYGGGYDNYGGGNYGSGNY 300



 Score = 28.1 bits (61), Expect = 4.4
 Identities = 11/14 (78%), Positives = 11/14 (78%)

Query: 8   GGGGGGGKGGRSRY 21
           G GG GG GGRSRY
Sbjct: 340 GSGGSGGYGGRSRY 353


>gi|4504447 heterogeneous nuclear ribonucleoprotein A2/B1 isoform A2
           [Homo sapiens]
          Length = 341

 Score = 43.1 bits (100), Expect = 1e-04
 Identities = 31/101 (30%), Positives = 36/101 (35%), Gaps = 12/101 (11%)

Query: 5   DHRGGGGGGGKGGRSRYRTTSSANNPNLMYQDECDRRLRGVKDGGRRDSASYRDRSETDR 64
           D RGGGG  G G  S +R  S                 RG  DG           +    
Sbjct: 199 DSRGGGGNFGPGPGSNFRGGSDGYGSG-----------RGFGDGYNGYGGGPGGGNFGGS 247

Query: 65  AGYANG-SGYGSPNSAFGAQAGQYTYGQGTYGAAAYGTSSY 104
            GY  G  GYG     +G Q G Y  G   YG   YG+ +Y
Sbjct: 248 PGYGGGRGGYGGGGPGYGNQGGGYGGGYDNYGGGNYGSGNY 288



 Score = 28.1 bits (61), Expect = 4.4
 Identities = 11/14 (78%), Positives = 11/14 (78%)

Query: 8   GGGGGGGKGGRSRY 21
           G GG GG GGRSRY
Sbjct: 328 GSGGSGGYGGRSRY 341


>gi|195972866 keratin 10 [Homo sapiens]
          Length = 584

 Score = 42.4 bits (98), Expect = 2e-04
 Identities = 40/141 (28%), Positives = 59/141 (41%), Gaps = 24/141 (17%)

Query: 3   LVDHRGGGGGGGKGGRS---RYRTTSSANNPNLMYQDECDRRLRGVKDGGRRDSASYRDR 59
           L++  G  GGGG+GG S    Y   SS    +            G   GG    +S    
Sbjct: 452 LLEGEGSSGGGGRGGGSFGGGYGGGSSGGGSS------------GGGHGGGHGGSSGGGY 499

Query: 60  SETDRAGYANGSGYGSPNSAFG---AQAGQYTYGQ-----GTYGAAAYGTSSYTAQEYGA 111
                 G ++G GYG  +S+ G   + +G Y  G      G YG  + G  S +   YG 
Sbjct: 500 GGGSSGGGSSGGGYGGGSSSGGHGGSSSGGYGGGSSGGGGGGYGGGSSGGGSSSGGGYGG 559

Query: 112 G-TYGASSTTSTGRSSQSSSQ 131
           G + G   ++S+G   +SSS+
Sbjct: 560 GSSSGGHKSSSSGSVGESSSK 580



 Score = 38.1 bits (87), Expect = 0.004
 Identities = 33/118 (27%), Positives = 49/118 (41%), Gaps = 22/118 (18%)

Query: 8   GGGGGG---GKGGRSRYRTTSSANNPNLMYQDECDRRLRGVKDGGRRDSASYRDRS---- 60
           GGGGGG   G GG S  R +SS  +              G   GG    +  R  S    
Sbjct: 18  GGGGGGGCGGGGGVSSLRISSSKGSLG-----------GGFSSGGFSGGSFSRGSSGGGC 66

Query: 61  ---ETDRAGYANGSGYGSPNSAFGAQAGQYTYGQGTYGAAAYGTSSYTAQEYGAGTYG 115
               +   G   G G GS   ++G+ +   +YG G++G  ++G  S+    +G G +G
Sbjct: 67  FGGSSGGYGGLGGFGGGSFRGSYGSSSFGGSYG-GSFGGGSFGGGSFGGGSFGGGGFG 123



 Score = 37.4 bits (85), Expect = 0.007
 Identities = 25/77 (32%), Positives = 30/77 (38%)

Query: 64  RAGYANGSGYGSPNSAFGAQAGQYTYGQGTYGAAAYGTSSYTAQEYGAGTYGASSTTSTG 123
           R G + G GYG  +S  G+  G +  G G      YG  S      G G  G SS+   G
Sbjct: 464 RGGGSFGGGYGGGSSGGGSSGGGHGGGHGGSSGGGYGGGSSGGGSSGGGYGGGSSSGGHG 523

Query: 124 RSSQSSSQQFSGIGRSG 140
            SS       S  G  G
Sbjct: 524 GSSSGGYGGGSSGGGGG 540


>gi|119395750 keratin 1 [Homo sapiens]
          Length = 644

 Score = 41.2 bits (95), Expect = 5e-04
 Identities = 39/132 (29%), Positives = 50/132 (37%), Gaps = 33/132 (25%)

Query: 7   RGGGGGGGKGGRSRYRTTSSANNPNLMYQDECDRRLRGVKDGGRRDSASYRDRSETDRAG 66
           RGGGGGG   G S Y +   +                G   GG R S             
Sbjct: 518 RGGGGGGYGSGGSSYGSGGGSYGS-------------GGGGGGGRGS------------- 551

Query: 67  YANGSGYGSPNSAFGAQAGQYTYGQGTYGAAAYGTSSYTAQEYGAGTYGASSTTSTGRSS 126
                 YGS  S++G+  G Y  G G  G  +YG+ S ++  Y  G+ G    +S GR S
Sbjct: 552 ------YGSGGSSYGSGGGSYGSGGGGGGHGSYGSGS-SSGGYRGGSGGGGGGSSGGRGS 604

Query: 127 QSSSQQFSGIGR 138
              S   S  GR
Sbjct: 605 GGGSSGGSIGGR 616



 Score = 37.4 bits (85), Expect = 0.007
 Identities = 32/89 (35%), Positives = 45/89 (50%), Gaps = 18/89 (20%)

Query: 70  GSGYGSPNSAFGAQAGQY-TYGQGTYGAAAYGT--SSYTA--QEYGA-------GTYGAS 117
           G GYGS  S++G+  G Y + G G  G  +YG+  SSY +    YG+       G+YG+ 
Sbjct: 522 GGGYGSGGSSYGSGGGSYGSGGGGGGGRGSYGSGGSSYGSGGGSYGSGGGGGGHGSYGSG 581

Query: 118 STT------STGRSSQSSSQQFSGIGRSG 140
           S++      S G    SS  + SG G SG
Sbjct: 582 SSSGGYRGGSGGGGGGSSGGRGSGGGSSG 610


>gi|15055543 splicing factor, arginine/serine-rich 2B [Homo sapiens]
          Length = 282

 Score = 40.8 bits (94), Expect = 7e-04
 Identities = 45/184 (24%), Positives = 71/184 (38%), Gaps = 29/184 (15%)

Query: 7   RGGGGGGGKGGRSRYRTTSSANNPNLMYQDECDRRLRGVKDGGRRDSASYR----DRSET 62
           RG   GGG G RSR     S  +P   ++     R RG      R  + YR     RS  
Sbjct: 106 RGRSRGGGYGRRSRSYGRRS-RSPRRRHRS----RSRGPSCSRSRSRSRYRGSRYSRSPY 160

Query: 63  DRAGYANGSGYGSPNSAFGAQAGQYTYGQGTYGAAAYGTSSYTAQEYG----------AG 112
            R+ Y+      SP S       +  Y +  YG + Y +S Y+   Y           +G
Sbjct: 161 SRSPYSRSRYSRSPYS-------RSRYRESRYGGSHYSSSGYSNSRYSRYHSSRSHSKSG 213

Query: 113 TYGASSTTSTGRSSQSSSQQFSGIGRSGQQPQPLMSQQFAQPPGATNMIGYMGQTAYQYP 172
           +  +S + ST +SS +   + S + RS  + +   S    + P   +      ++  + P
Sbjct: 214 SSTSSRSASTSKSSSARRSKSSSVSRSRSRSR---SSSMTRSPPRVSKRKSKSRSRSKRP 270

Query: 173 PPPP 176
           P  P
Sbjct: 271 PKSP 274


>gi|33946297 zinc finger protein 326 isoform 1 [Homo sapiens]
          Length = 582

 Score = 40.4 bits (93), Expect = 9e-04
 Identities = 42/158 (26%), Positives = 60/158 (37%), Gaps = 23/158 (14%)

Query: 5   DHRGGGGGGGKGGRSRYRTTSSANNPNLMYQ----DECDRRLRGVKDGGRRDSASYRDRS 60
           +H GGGGG   G    Y + SS    +L       +E ++   G   GGR +S SYR+  
Sbjct: 61  NHSGGGGGSRFGPYESYDSRSSLGGRDLYRSGYGFNEPEQSRFGGSYGGRFES-SYRNSL 119

Query: 61  ETDRAGYANGSGYGSPNS------AFGAQAGQYTYGQ-----------GTYGAAAYGTSS 103
           ++       GS + +P S       F    G+  Y                G+   GT +
Sbjct: 120 DSFGGRNQGGSSWEAPYSRSKLRPGFMEDRGRENYSSYSSFSSPHMKPAPVGSRGRGTPA 179

Query: 104 YTAQEYGAGTYGASSTTSTGRS-SQSSSQQFSGIGRSG 140
           Y    +G+  Y A    STGR   +     F  I R G
Sbjct: 180 YPESTFGSRNYDAFGGPSTGRGRGRGHMGDFGSIHRPG 217


>gi|4507353 TBP-associated factor 15 isoform 2 [Homo sapiens]
          Length = 589

 Score = 39.7 bits (91), Expect = 0.001
 Identities = 31/131 (23%), Positives = 40/131 (30%), Gaps = 24/131 (18%)

Query: 7   RGGGGGGGKGGRSRYR-------------------TTSSANNPNLMYQDECDRRLRGVKD 47
           RGGG GGG+ GR  YR                      S  N N   ++ C++      +
Sbjct: 323 RGGGSGGGRRGRGGYRGRGGFQGRGGDPKSGDWVCPNPSCGNMNFARRNSCNQCNEPRPE 382

Query: 48  GGRRDSASYRDRSETDRAGYANGSGYGSPNSAFGAQAGQYTYGQGTYGAAAYGTSSYTAQ 107
             R     +R R      GY    G G     +G          G YG        Y+  
Sbjct: 383 DSRPSGGDFRGRGYGGERGYRGRGGRGGDRGGYGGDR-----SGGGYGGDRSSGGGYSGD 437

Query: 108 EYGAGTYGASS 118
             G G  G  S
Sbjct: 438 RSGGGYGGDRS 448



 Score = 35.4 bits (80), Expect = 0.028
 Identities = 36/130 (27%), Positives = 40/130 (30%), Gaps = 11/130 (8%)

Query: 5   DHRGGGGGGGKGGRSRYRTTSSANNPNLMYQDECDRRLRGVKDGGRRDSASYRDRSET-- 62
           D  GGG GG +     Y    S                RG   GG R      DR     
Sbjct: 418 DRSGGGYGGDRSSGGGYSGDRSGGGYGGDRSGGGYGGDRGGGYGGDRGGGYGGDRGGGYG 477

Query: 63  -DRAGYAN--GSGYGSPNSAFGAQAGQYTYGQGTYGA--AAYG----TSSYTAQEYGAGT 113
            DR GY    G GYG     +G   G Y   +G YG     YG       Y     G   
Sbjct: 478 GDRGGYGGDRGGGYGGDRGGYGGDRGGYGGDRGGYGGDRGGYGGDRSRGGYGGDRGGGSG 537

Query: 114 YGASSTTSTG 123
           YG   +   G
Sbjct: 538 YGGDRSGGYG 547



 Score = 32.0 bits (71), Expect = 0.30
 Identities = 30/106 (28%), Positives = 38/106 (35%), Gaps = 4/106 (3%)

Query: 71  SGYGSPNSAFGAQAGQYTYGQGTYGAAAYGTSSYTAQEYGAGTYGASSTTSTGRSSQSSS 130
           S  GS   + G Q    TYG    G+  YG +S +   YG  T  +     +G SS   S
Sbjct: 2   SDSGSYGQSGGEQQSYSTYGNP--GSQGYGQASQSYSGYGQTTDSSYGQNYSGYSSYGQS 59

Query: 131 QQFSGIGRSGQQPQPLMSQQFAQPPGATNM--IGYMGQTAYQYPPP 174
              S  G   Q+      Q +       NM   G  G  A  Y  P
Sbjct: 60  YSQSYGGYENQKQSSYSQQPYNNQGQQQNMESSGSQGGRAPSYDQP 105



 Score = 31.2 bits (69), Expect = 0.52
 Identities = 38/113 (33%), Positives = 48/113 (42%), Gaps = 19/113 (16%)

Query: 52  DSASYRDRSETDRAGYANGSGYGSPNSAFGAQAGQ-YT-YGQGT---YGAAAYGTSSY-- 104
           DS SY  +S  ++  Y   S YG+P S    QA Q Y+ YGQ T   YG    G SSY  
Sbjct: 3   DSGSY-GQSGGEQQSY---STYGNPGSQGYGQASQSYSGYGQTTDSSYGQNYSGYSSYGQ 58

Query: 105 -TAQEYGA------GTYGASSTTSTGRSSQSSSQQFSGIGRSGQQPQPLMSQQ 150
             +Q YG        +Y      + G+     S    G GR+    QP   QQ
Sbjct: 59  SYSQSYGGYENQKQSSYSQQPYNNQGQQQNMESSGSQG-GRAPSYDQPDYGQQ 110


>gi|21327701 TBP-associated factor 15 isoform 1 [Homo sapiens]
          Length = 592

 Score = 39.7 bits (91), Expect = 0.001
 Identities = 31/131 (23%), Positives = 40/131 (30%), Gaps = 24/131 (18%)

Query: 7   RGGGGGGGKGGRSRYR-------------------TTSSANNPNLMYQDECDRRLRGVKD 47
           RGGG GGG+ GR  YR                      S  N N   ++ C++      +
Sbjct: 326 RGGGSGGGRRGRGGYRGRGGFQGRGGDPKSGDWVCPNPSCGNMNFARRNSCNQCNEPRPE 385

Query: 48  GGRRDSASYRDRSETDRAGYANGSGYGSPNSAFGAQAGQYTYGQGTYGAAAYGTSSYTAQ 107
             R     +R R      GY    G G     +G          G YG        Y+  
Sbjct: 386 DSRPSGGDFRGRGYGGERGYRGRGGRGGDRGGYGGDR-----SGGGYGGDRSSGGGYSGD 440

Query: 108 EYGAGTYGASS 118
             G G  G  S
Sbjct: 441 RSGGGYGGDRS 451



 Score = 35.4 bits (80), Expect = 0.028
 Identities = 36/130 (27%), Positives = 40/130 (30%), Gaps = 11/130 (8%)

Query: 5   DHRGGGGGGGKGGRSRYRTTSSANNPNLMYQDECDRRLRGVKDGGRRDSASYRDRSET-- 62
           D  GGG GG +     Y    S                RG   GG R      DR     
Sbjct: 421 DRSGGGYGGDRSSGGGYSGDRSGGGYGGDRSGGGYGGDRGGGYGGDRGGGYGGDRGGGYG 480

Query: 63  -DRAGYAN--GSGYGSPNSAFGAQAGQYTYGQGTYGA--AAYG----TSSYTAQEYGAGT 113
            DR GY    G GYG     +G   G Y   +G YG     YG       Y     G   
Sbjct: 481 GDRGGYGGDRGGGYGGDRGGYGGDRGGYGGDRGGYGGDRGGYGGDRSRGGYGGDRGGGSG 540

Query: 114 YGASSTTSTG 123
           YG   +   G
Sbjct: 541 YGGDRSGGYG 550



 Score = 32.7 bits (73), Expect = 0.18
 Identities = 27/91 (29%), Positives = 37/91 (40%), Gaps = 4/91 (4%)

Query: 52  DSASYRDRSETDRAGYANGSGYGSPNSAFGAQAGQYTYGQGTYGAAAYGTSSYTAQEYGA 111
           DS SY  +S  ++  Y   S YG+P S    QA Q   G G    ++YG +      YG 
Sbjct: 3   DSGSY-GQSGGEQQSY---STYGNPGSQGYGQASQSYSGYGQTTDSSYGQNYSGYSSYGQ 58

Query: 112 GTYGASSTTSTGRSSQSSSQQFSGIGRSGQQ 142
              G S +     + + SS         GQQ
Sbjct: 59  SQSGYSQSYGGYENQKQSSYSQQPYNNQGQQ 89



 Score = 30.8 bits (68), Expect = 0.68
 Identities = 27/89 (30%), Positives = 34/89 (38%), Gaps = 9/89 (10%)

Query: 62  TDRAGYANGSGYGSPNSAFGAQAGQYTYGQGTYGAAAYGTSSYTAQEYGAGTYGASSTTS 121
           +D   Y    G     S +G   G   YGQ +   + YG +  T   YG    G S   S
Sbjct: 2   SDSGSYGQSGGEQQSYSTYG-NPGSQGYGQASQSYSGYGQT--TDSSYGQNYSGYS---S 55

Query: 122 TGRSSQSSSQQFSGIGRSGQQPQPLMSQQ 150
            G+S    SQ + G      Q Q   SQQ
Sbjct: 56  YGQSQSGYSQSYGGY---ENQKQSSYSQQ 81


>gi|253970506 Ewing sarcoma breakpoint region 1 isoform 5 [Homo
           sapiens]
          Length = 354

 Score = 39.3 bits (90), Expect = 0.002
 Identities = 47/157 (29%), Positives = 59/157 (37%), Gaps = 53/157 (33%)

Query: 72  GYGSPNSAFGAQAGQYTYGQ------------GTYGAAAYGTS----------------- 102
           GY     A+G Q+   TYGQ             TYG  AY TS                 
Sbjct: 28  GYAQTTQAYGQQS-YGTYGQPTDVSYTQAQTTATYGQTAYATSYGQPPTGYTTPTAPQAY 86

Query: 103 SYTAQEYGAGTYGASSTTSTGRSSQSSSQQFSGIGRS------GQQP---QPLMSQ---- 149
           S   Q YG G Y   +TT+T  ++Q+S    S  G        GQQP    P   Q    
Sbjct: 87  SQPVQGYGTGAY--DTTTATVTTTQASYAAQSAYGTQPAYPAYGQQPAATAPTRPQDGNK 144

Query: 150 --QFAQPPGATN-----MIGYMGQTAYQYPPPPPPPP 179
             + +QP  +T       +GY GQ+ Y YP  P   P
Sbjct: 145 PTETSQPQSSTGGYNQPSLGY-GQSNYSYPQVPGSYP 180



 Score = 28.5 bits (62), Expect = 3.4
 Identities = 33/135 (24%), Positives = 45/135 (33%), Gaps = 33/135 (24%)

Query: 46  KDGGRRDSASYRDRSETDRAGYANGS-GYGSPNSAFGAQAGQYTYGQGTYGAAAYGTSSY 104
           +DG +    S   + ++   GY   S GYG  N ++    G Y   Q      +Y  +SY
Sbjct: 140 QDGNKPTETS---QPQSSTGGYNQPSLGYGQSNYSYPQVPGSYPM-QPVTAPPSYPPTSY 195

Query: 105 TAQEYGAGTYGASSTTSTGRSSQSSSQQFSGIGRSGQQPQPLMSQQFAQPPGATNMIGYM 164
                       SST  T     S SQQ                  + QP        Y 
Sbjct: 196 ------------SSTQPTSYDQSSYSQQ----------------NTYGQPSSYGQQSSYG 227

Query: 165 GQTAYQYPPPPPPPP 179
            Q++Y   PP   PP
Sbjct: 228 QQSSYGQQPPTSYPP 242


>gi|253970502 Ewing sarcoma breakpoint region 1 isoform 3 [Homo
           sapiens]
          Length = 655

 Score = 39.3 bits (90), Expect = 0.002
 Identities = 47/157 (29%), Positives = 59/157 (37%), Gaps = 53/157 (33%)

Query: 72  GYGSPNSAFGAQAGQYTYGQ------------GTYGAAAYGTS----------------- 102
           GY     A+G Q+   TYGQ             TYG  AY TS                 
Sbjct: 28  GYAQTTQAYGQQS-YGTYGQPTDVSYTQAQTTATYGQTAYATSYGQPPTGYTTPTAPQAY 86

Query: 103 SYTAQEYGAGTYGASSTTSTGRSSQSSSQQFSGIGRS------GQQP---QPLMSQ---- 149
           S   Q YG G Y   +TT+T  ++Q+S    S  G        GQQP    P   Q    
Sbjct: 87  SQPVQGYGTGAY--DTTTATVTTTQASYAAQSAYGTQPAYPAYGQQPAATAPTRPQDGNK 144

Query: 150 --QFAQPPGATN-----MIGYMGQTAYQYPPPPPPPP 179
             + +QP  +T       +GY GQ+ Y YP  P   P
Sbjct: 145 PTETSQPQSSTGGYNQPSLGY-GQSNYSYPQVPGSYP 180



 Score = 28.5 bits (62), Expect = 3.4
 Identities = 33/135 (24%), Positives = 45/135 (33%), Gaps = 33/135 (24%)

Query: 46  KDGGRRDSASYRDRSETDRAGYANGS-GYGSPNSAFGAQAGQYTYGQGTYGAAAYGTSSY 104
           +DG +    S   + ++   GY   S GYG  N ++    G Y   Q      +Y  +SY
Sbjct: 140 QDGNKPTETS---QPQSSTGGYNQPSLGYGQSNYSYPQVPGSYPM-QPVTAPPSYPPTSY 195

Query: 105 TAQEYGAGTYGASSTTSTGRSSQSSSQQFSGIGRSGQQPQPLMSQQFAQPPGATNMIGYM 164
                       SST  T     S SQQ                  + QP        Y 
Sbjct: 196 ------------SSTQPTSYDQSSYSQQ----------------NTYGQPSSYGQQSSYG 227

Query: 165 GQTAYQYPPPPPPPP 179
            Q++Y   PP   PP
Sbjct: 228 QQSSYGQQPPTSYPP 242


>gi|4885225 Ewing sarcoma breakpoint region 1 isoform 2 [Homo
           sapiens]
          Length = 656

 Score = 39.3 bits (90), Expect = 0.002
 Identities = 47/157 (29%), Positives = 59/157 (37%), Gaps = 53/157 (33%)

Query: 72  GYGSPNSAFGAQAGQYTYGQ------------GTYGAAAYGTS----------------- 102
           GY     A+G Q+   TYGQ             TYG  AY TS                 
Sbjct: 28  GYAQTTQAYGQQS-YGTYGQPTDVSYTQAQTTATYGQTAYATSYGQPPTGYTTPTAPQAY 86

Query: 103 SYTAQEYGAGTYGASSTTSTGRSSQSSSQQFSGIGRS------GQQP---QPLMSQ---- 149
           S   Q YG G Y   +TT+T  ++Q+S    S  G        GQQP    P   Q    
Sbjct: 87  SQPVQGYGTGAY--DTTTATVTTTQASYAAQSAYGTQPAYPAYGQQPAATAPTRPQDGNK 144

Query: 150 --QFAQPPGATN-----MIGYMGQTAYQYPPPPPPPP 179
             + +QP  +T       +GY GQ+ Y YP  P   P
Sbjct: 145 PTETSQPQSSTGGYNQPSLGY-GQSNYSYPQVPGSYP 180



 Score = 28.5 bits (62), Expect = 3.4
 Identities = 33/135 (24%), Positives = 45/135 (33%), Gaps = 33/135 (24%)

Query: 46  KDGGRRDSASYRDRSETDRAGYANGS-GYGSPNSAFGAQAGQYTYGQGTYGAAAYGTSSY 104
           +DG +    S   + ++   GY   S GYG  N ++    G Y   Q      +Y  +SY
Sbjct: 140 QDGNKPTETS---QPQSSTGGYNQPSLGYGQSNYSYPQVPGSYPM-QPVTAPPSYPPTSY 195

Query: 105 TAQEYGAGTYGASSTTSTGRSSQSSSQQFSGIGRSGQQPQPLMSQQFAQPPGATNMIGYM 164
                       SST  T     S SQQ                  + QP        Y 
Sbjct: 196 ------------SSTQPTSYDQSSYSQQ----------------NTYGQPSSYGQQSSYG 227

Query: 165 GQTAYQYPPPPPPPP 179
            Q++Y   PP   PP
Sbjct: 228 QQSSYGQQPPTSYPP 242


>gi|212549553 interleukin enhancer binding factor 3 isoform d [Homo
           sapiens]
          Length = 898

 Score = 39.3 bits (90), Expect = 0.002
 Identities = 48/172 (27%), Positives = 64/172 (37%), Gaps = 32/172 (18%)

Query: 9   GGGGGGKGGRSRYRTTSSANNPNLMYQDECDRRLRGVKD---GGRRDSASYRDRSETDRA 65
           GGGGGG GG S Y +    +N    Y      +  G K    G ++ S     +S   + 
Sbjct: 705 GGGGGGGGGSSGYGSYYQGDN----YNSPVPPKHAGKKQPHGGQQKPSYGSGYQSHQGQQ 760

Query: 66  GYANGSGYGSPNSAFGAQAGQYTYGQGTYGAAAYGTSSYTAQEYGAGT---------YGA 116
              N S Y +     G Q G Y +GQG+Y      ++SY +   G G+         Y  
Sbjct: 761 QSYNQSPYSNYGPPQGKQKG-YNHGQGSYSY----SNSYNSPGGGGGSDYNYESKFNYSG 815

Query: 117 SSTTSTGRSSQSSSQQF-----------SGIGRSGQQPQPLMSQQFAQPPGA 157
           S   S G S  S    +           SG G S Q  Q   SQ     PG+
Sbjct: 816 SGGRSGGNSYGSGGASYNPGSHGGYGGGSGGGSSYQGKQGGYSQSNYNSPGS 867



 Score = 35.4 bits (80), Expect = 0.028
 Identities = 45/184 (24%), Positives = 62/184 (33%), Gaps = 55/184 (29%)

Query: 8   GGGGGGGKGGRSRYRTTSSANNP--------------------NLMYQDECDRRL----- 42
           GGGGGGG  G   Y    + N+P                       YQ    ++      
Sbjct: 707 GGGGGGGSSGYGSYYQGDNYNSPVPPKHAGKKQPHGGQQKPSYGSGYQSHQGQQQSYNQS 766

Query: 43  --------RGVKDGGRRDSASYRDRSETDRAGYANGSGYGSPN----SAFGAQAGQYTYG 90
                   +G + G      SY   +  +  G   GS Y   +    S  G ++G  +YG
Sbjct: 767 PYSNYGPPQGKQKGYNHGQGSYSYSNSYNSPGGGGGSDYNYESKFNYSGSGGRSGGNSYG 826

Query: 91  QGT----------YGAAAYGTSSYTAQEYGAGTYGASSTTSTGRSSQSSSQQFSGIGRSG 140
            G           YG  + G SSY  ++   G Y  S+  S G     S Q +SG   S 
Sbjct: 827 SGGASYNPGSHGGYGGGSGGGSSYQGKQ---GGYSQSNYNSPG-----SGQNYSGPPSSY 878

Query: 141 QQPQ 144
           Q  Q
Sbjct: 879 QSSQ 882



 Score = 30.8 bits (68), Expect = 0.68
 Identities = 35/136 (25%), Positives = 50/136 (36%), Gaps = 12/136 (8%)

Query: 7   RGGGGGGGKGGRSRYRTTSSANNPNLMYQDECDRRLRGVKDGGRRDSASYRD-RSETDRA 65
           RG G GG   GR R R    AN+   M              GG   +A Y    S    +
Sbjct: 644 RGRGRGGSIRGRGRGRGFGGANHGGYM---NAGAGYGSYGYGGNSATAGYSQFYSNGGHS 700

Query: 66  GYANGSGYGSPNSAFGAQAGQYTYGQG-TYGAAAYGTSSYTAQEYGA---GTYGASSTTS 121
           G A+G G G      G  +G  +Y QG  Y +      +   Q +G     +YG+   + 
Sbjct: 701 GNASGGGGGGG----GGSSGYGSYYQGDNYNSPVPPKHAGKKQPHGGQQKPSYGSGYQSH 756

Query: 122 TGRSSQSSSQQFSGIG 137
            G+    +   +S  G
Sbjct: 757 QGQQQSYNQSPYSNYG 772



 Score = 29.6 bits (65), Expect = 1.5
 Identities = 35/130 (26%), Positives = 44/130 (33%), Gaps = 18/130 (13%)

Query: 66  GYANGSGYGSPNSAFGAQAGQYTYGQGTYGAAAYGTSSYTA---QEYGAGTYGASSTTST 122
           G   G G+G      GA  G Y      YG+  YG +S TA   Q Y  G +  +++   
Sbjct: 654 GRGRGRGFG------GANHGGYMNAGAGYGSYGYGGNSATAGYSQFYSNGGHSGNASGGG 707

Query: 123 GRSSQSSSQQFSGI-GRSGQQPQPLMSQQFAQPPGATNMIGYMG--------QTAYQYPP 173
           G     SS   S   G +   P P       QP G      Y          Q +Y   P
Sbjct: 708 GGGGGGSSGYGSYYQGDNYNSPVPPKHAGKKQPHGGQQKPSYGSGYQSHQGQQQSYNQSP 767

Query: 174 PPPPPPPSRK 183
                PP  K
Sbjct: 768 YSNYGPPQGK 777


>gi|24234750 interleukin enhancer binding factor 3 isoform a [Homo
           sapiens]
          Length = 894

 Score = 39.3 bits (90), Expect = 0.002
 Identities = 48/172 (27%), Positives = 64/172 (37%), Gaps = 32/172 (18%)

Query: 9   GGGGGGKGGRSRYRTTSSANNPNLMYQDECDRRLRGVKD---GGRRDSASYRDRSETDRA 65
           GGGGGG GG S Y +    +N    Y      +  G K    G ++ S     +S   + 
Sbjct: 701 GGGGGGGGGSSGYGSYYQGDN----YNSPVPPKHAGKKQPHGGQQKPSYGSGYQSHQGQQ 756

Query: 66  GYANGSGYGSPNSAFGAQAGQYTYGQGTYGAAAYGTSSYTAQEYGAGT---------YGA 116
              N S Y +     G Q G Y +GQG+Y      ++SY +   G G+         Y  
Sbjct: 757 QSYNQSPYSNYGPPQGKQKG-YNHGQGSYSY----SNSYNSPGGGGGSDYNYESKFNYSG 811

Query: 117 SSTTSTGRSSQSSSQQF-----------SGIGRSGQQPQPLMSQQFAQPPGA 157
           S   S G S  S    +           SG G S Q  Q   SQ     PG+
Sbjct: 812 SGGRSGGNSYGSGGASYNPGSHGGYGGGSGGGSSYQGKQGGYSQSNYNSPGS 863



 Score = 35.4 bits (80), Expect = 0.028
 Identities = 45/184 (24%), Positives = 62/184 (33%), Gaps = 55/184 (29%)

Query: 8   GGGGGGGKGGRSRYRTTSSANNP--------------------NLMYQDECDRRL----- 42
           GGGGGGG  G   Y    + N+P                       YQ    ++      
Sbjct: 703 GGGGGGGSSGYGSYYQGDNYNSPVPPKHAGKKQPHGGQQKPSYGSGYQSHQGQQQSYNQS 762

Query: 43  --------RGVKDGGRRDSASYRDRSETDRAGYANGSGYGSPN----SAFGAQAGQYTYG 90
                   +G + G      SY   +  +  G   GS Y   +    S  G ++G  +YG
Sbjct: 763 PYSNYGPPQGKQKGYNHGQGSYSYSNSYNSPGGGGGSDYNYESKFNYSGSGGRSGGNSYG 822

Query: 91  QGT----------YGAAAYGTSSYTAQEYGAGTYGASSTTSTGRSSQSSSQQFSGIGRSG 140
            G           YG  + G SSY  ++   G Y  S+  S G     S Q +SG   S 
Sbjct: 823 SGGASYNPGSHGGYGGGSGGGSSYQGKQ---GGYSQSNYNSPG-----SGQNYSGPPSSY 874

Query: 141 QQPQ 144
           Q  Q
Sbjct: 875 QSSQ 878



 Score = 30.8 bits (68), Expect = 0.68
 Identities = 35/136 (25%), Positives = 50/136 (36%), Gaps = 12/136 (8%)

Query: 7   RGGGGGGGKGGRSRYRTTSSANNPNLMYQDECDRRLRGVKDGGRRDSASYRD-RSETDRA 65
           RG G GG   GR R R    AN+   M              GG   +A Y    S    +
Sbjct: 640 RGRGRGGSIRGRGRGRGFGGANHGGYM---NAGAGYGSYGYGGNSATAGYSQFYSNGGHS 696

Query: 66  GYANGSGYGSPNSAFGAQAGQYTYGQG-TYGAAAYGTSSYTAQEYGA---GTYGASSTTS 121
           G A+G G G      G  +G  +Y QG  Y +      +   Q +G     +YG+   + 
Sbjct: 697 GNASGGGGGGG----GGSSGYGSYYQGDNYNSPVPPKHAGKKQPHGGQQKPSYGSGYQSH 752

Query: 122 TGRSSQSSSQQFSGIG 137
            G+    +   +S  G
Sbjct: 753 QGQQQSYNQSPYSNYG 768



 Score = 29.6 bits (65), Expect = 1.5
 Identities = 35/130 (26%), Positives = 44/130 (33%), Gaps = 18/130 (13%)

Query: 66  GYANGSGYGSPNSAFGAQAGQYTYGQGTYGAAAYGTSSYTA---QEYGAGTYGASSTTST 122
           G   G G+G      GA  G Y      YG+  YG +S TA   Q Y  G +  +++   
Sbjct: 650 GRGRGRGFG------GANHGGYMNAGAGYGSYGYGGNSATAGYSQFYSNGGHSGNASGGG 703

Query: 123 GRSSQSSSQQFSGI-GRSGQQPQPLMSQQFAQPPGATNMIGYMG--------QTAYQYPP 173
           G     SS   S   G +   P P       QP G      Y          Q +Y   P
Sbjct: 704 GGGGGGSSGYGSYYQGDNYNSPVPPKHAGKKQPHGGQQKPSYGSGYQSHQGQQQSYNQSP 763

Query: 174 PPPPPPPSRK 183
                PP  K
Sbjct: 764 YSNYGPPQGK 773


  Database: hs.faa
    Posted date:  Aug 4, 2009  4:42 PM
  Number of letters in database: 18,247,518
  Number of sequences in database:  37,866
  
Lambda     K      H
   0.308    0.128    0.382 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 9,823,423
Number of Sequences: 37866
Number of extensions: 590272
Number of successful extensions: 13149
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 450
Number of HSP's successfully gapped in prelim test: 361
Number of HSP's that attempted gapping in prelim test: 6791
Number of HSP's gapped (non-prelim): 4172
length of query: 183
length of database: 18,247,518
effective HSP length: 96
effective length of query: 87
effective length of database: 14,612,382
effective search space: 1271277234
effective search space used: 1271277234
T: 11
A: 40
X1: 16 ( 7.1 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (21.6 bits)
S2: 58 (26.9 bits)

Search results were obtained with NCBI BLAST and RefSeq entries.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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