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Search of human proteins with 6912570
BLASTP 2.2.11 [Jun-05-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= gi|6912570 p8 protein isoform b [Homo sapiens]
(82 letters)
Database: hs.faa
37,866 sequences; 18,247,518 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|6912570 p8 protein isoform b [Homo sapiens] 170 3e-43
gi|109948307 p8 protein isoform a [Homo sapiens] 159 6e-40
gi|224589117 hypothetical protein LOC389493 [Homo sapiens] 61 2e-10
gi|32996733 Ras association (RalGDS/AF-6) domain family 5 isofor... 33 0.037
gi|32996731 Ras association (RalGDS/AF-6) domain family 5 isofor... 33 0.037
gi|7706607 LEM domain containing 3 [Homo sapiens] 32 0.14
gi|239755920 PREDICTED: hypothetical protein XP_002344746 [Homo ... 31 0.19
gi|239744740 PREDICTED: hypothetical protein XP_002343259 [Homo ... 31 0.19
gi|39995084 integrator complex subunit 3 [Homo sapiens] 30 0.41
gi|239754013 PREDICTED: hypothetical protein [Homo sapiens] 30 0.54
gi|239750438 PREDICTED: hypothetical protein [Homo sapiens] 30 0.54
gi|239748544 PREDICTED: hypothetical protein XP_002346718 [Homo ... 30 0.54
gi|239742527 PREDICTED: hypothetical protein XP_002342542 [Homo ... 30 0.54
gi|153792764 hypothetical protein LOC57624 [Homo sapiens] 29 0.71
gi|102469037 jun D proto-oncogene [Homo sapiens] 29 0.71
gi|239753409 PREDICTED: similar to hCG1811893 [Homo sapiens] 29 0.71
gi|148806908 fibronectin type III domain containing 1 [Homo sapi... 29 0.71
gi|40068464 AT rich interactive domain 1B (SWI1-like) isoform 2 ... 29 0.71
gi|40068466 AT rich interactive domain 1B (SWI1-like) isoform 1 ... 29 0.71
gi|40068462 AT rich interactive domain 1B (SWI1-like) isoform 3 ... 29 0.71
gi|13699803 WAS protein family, member 3 [Homo sapiens] 29 0.92
gi|117190342 PHD finger protein 2 [Homo sapiens] 28 1.2
gi|28269687 zygote arrest 1 [Homo sapiens] 28 1.2
gi|7662234 rab11-family interacting protein 3 isoform 1 [Homo sa... 28 1.6
gi|19882241 immunoglobulin superfamily, DCC subclass, member 4 [... 28 1.6
gi|209954788 activating transcription factor 6 beta isoform b [H... 28 1.6
gi|20631977 activating transcription factor 6 beta isoform a [Ho... 28 1.6
gi|78000163 sorbin and SH3 domain containing 1 isoform 3 [Homo s... 28 2.1
gi|32698936 B-cell CLL/lymphoma 9-like [Homo sapiens] 28 2.1
gi|8922112 carbohydrate sulfotransferase 12 [Homo sapiens] 27 2.7
>gi|6912570 p8 protein isoform b [Homo sapiens]
Length = 82
Score = 170 bits (430), Expect = 3e-43
Identities = 82/82 (100%), Positives = 82/82 (100%)
Query: 1 MATFPPATSAPQQPPGPEDEDSSLDESDLYSLAHSYLGGGGRKGRTKREAAANTNRPSPG 60
MATFPPATSAPQQPPGPEDEDSSLDESDLYSLAHSYLGGGGRKGRTKREAAANTNRPSPG
Sbjct: 1 MATFPPATSAPQQPPGPEDEDSSLDESDLYSLAHSYLGGGGRKGRTKREAAANTNRPSPG 60
Query: 61 GHERKLVTKLQNSERKKRGARR 82
GHERKLVTKLQNSERKKRGARR
Sbjct: 61 GHERKLVTKLQNSERKKRGARR 82
>gi|109948307 p8 protein isoform a [Homo sapiens]
Length = 100
Score = 159 bits (401), Expect = 6e-40
Identities = 82/100 (82%), Positives = 82/100 (82%), Gaps = 18/100 (18%)
Query: 1 MATFPPATSAPQQPPGPEDEDSSLDESDLYSLAHSYLG------------------GGGR 42
MATFPPATSAPQQPPGPEDEDSSLDESDLYSLAHSYLG GGGR
Sbjct: 1 MATFPPATSAPQQPPGPEDEDSSLDESDLYSLAHSYLGPLIMPMPTSPLTPALVTGGGGR 60
Query: 43 KGRTKREAAANTNRPSPGGHERKLVTKLQNSERKKRGARR 82
KGRTKREAAANTNRPSPGGHERKLVTKLQNSERKKRGARR
Sbjct: 61 KGRTKREAAANTNRPSPGGHERKLVTKLQNSERKKRGARR 100
>gi|224589117 hypothetical protein LOC389493 [Homo sapiens]
Length = 97
Score = 61.2 bits (147), Expect = 2e-10
Identities = 36/75 (48%), Positives = 43/75 (57%), Gaps = 2/75 (2%)
Query: 6 PATSAPQQPPGPEDEDSSL-DESDLYSLAHSYLGGGGR-KGRTKREAAANTNRPSPGGHE 63
P A +PP P + L D D Y L G GR KGRT+RE A TN P+PGGHE
Sbjct: 10 PRLQALARPPPPISYEEELYDCLDYYYLRDFPACGAGRSKGRTRREQALRTNWPAPGGHE 69
Query: 64 RKLVTKLQNSERKKR 78
RK+ KL N +RK+R
Sbjct: 70 RKVAQKLLNGQRKRR 84
>gi|32996733 Ras association (RalGDS/AF-6) domain family 5 isoform
B [Homo sapiens]
Length = 336
Score = 33.5 bits (75), Expect = 0.037
Identities = 27/76 (35%), Positives = 32/76 (42%), Gaps = 7/76 (9%)
Query: 9 SAPQQPPGPEDEDSSLDESDLYSLAHSYLGGGGRKGRTKREAAANTNRPSPGGHE--RKL 66
S P+ PP P D S L S A G R+GR+ R AA P P R L
Sbjct: 29 SGPELPPPPPDRSSRLCVPAPLSTAP-----GAREGRSARRAARGNLEPPPRASRPARPL 83
Query: 67 VTKLQNSERKKRGARR 82
LQ R++ GA R
Sbjct: 84 RPGLQQRLRRRPGAPR 99
>gi|32996731 Ras association (RalGDS/AF-6) domain family 5 isoform
A [Homo sapiens]
Length = 418
Score = 33.5 bits (75), Expect = 0.037
Identities = 27/76 (35%), Positives = 32/76 (42%), Gaps = 7/76 (9%)
Query: 9 SAPQQPPGPEDEDSSLDESDLYSLAHSYLGGGGRKGRTKREAAANTNRPSPGGHE--RKL 66
S P+ PP P D S L S A G R+GR+ R AA P P R L
Sbjct: 29 SGPELPPPPPDRSSRLCVPAPLSTAP-----GAREGRSARRAARGNLEPPPRASRPARPL 83
Query: 67 VTKLQNSERKKRGARR 82
LQ R++ GA R
Sbjct: 84 RPGLQQRLRRRPGAPR 99
>gi|7706607 LEM domain containing 3 [Homo sapiens]
Length = 911
Score = 31.6 bits (70), Expect = 0.14
Identities = 23/64 (35%), Positives = 30/64 (46%), Gaps = 6/64 (9%)
Query: 23 SLDESDLYSLAHSYLGGGGRKGRTKREAAANTNRPSPGGHERKLVTKLQNSERKKR---- 78
S DESD+ + GGGGRK R + P+P VT ++ER+K
Sbjct: 140 SSDESDVEASPRDQAGGGGRKDRASLQYRGLKAPPAPLAASE--VTNSNSAERRKPHSWW 197
Query: 79 GARR 82
GARR
Sbjct: 198 GARR 201
>gi|239755920 PREDICTED: hypothetical protein XP_002344746 [Homo
sapiens]
Length = 600
Score = 31.2 bits (69), Expect = 0.19
Identities = 22/79 (27%), Positives = 34/79 (43%), Gaps = 10/79 (12%)
Query: 10 APQQPPGPEDEDSSLDESDLYSLAHSYLGGGGRKGRTKREAAANTNRPSPGGHERKLVT- 68
APQ GP+ + + L H LG G R+ +R R G ER+LVT
Sbjct: 519 APQMRLGPQGGERDAGLGRPHQLIHDRLGQGARQRERRRAVGRQRQR----GEERRLVTQ 574
Query: 69 -----KLQNSERKKRGARR 82
+++ +R++R R
Sbjct: 575 HRAHGEVRRPKREERAGSR 593
>gi|239744740 PREDICTED: hypothetical protein XP_002343259 [Homo
sapiens]
Length = 457
Score = 31.2 bits (69), Expect = 0.19
Identities = 22/79 (27%), Positives = 34/79 (43%), Gaps = 10/79 (12%)
Query: 10 APQQPPGPEDEDSSLDESDLYSLAHSYLGGGGRKGRTKREAAANTNRPSPGGHERKLVT- 68
APQ GP+ + + L H LG G R+ +R R G ER+LVT
Sbjct: 376 APQMRLGPQGGERDAGLGRPHQLIHDRLGQGARQRERRRAVGRQRQR----GEERRLVTQ 431
Query: 69 -----KLQNSERKKRGARR 82
+++ +R++R R
Sbjct: 432 HRAHGEVRRPKREERAGSR 450
>gi|39995084 integrator complex subunit 3 [Homo sapiens]
Length = 1042
Score = 30.0 bits (66), Expect = 0.41
Identities = 21/71 (29%), Positives = 33/71 (46%), Gaps = 6/71 (8%)
Query: 6 PATSAPQQPPGPEDEDSSLDESDLYSLAHSYLGGGGRKGRTKREAAANTNRPSPGGHERK 65
P A Q DE + SDL+SLA Y + +++R+AA ++ R RK
Sbjct: 946 PILQALQHVQASCDEAHKMKFSDLFSLAEEYEDSSTKPPKSRRKAALSSPR------SRK 999
Query: 66 LVTKLQNSERK 76
T+ N+E +
Sbjct: 1000 NATQPPNAEEE 1010
>gi|239754013 PREDICTED: hypothetical protein [Homo sapiens]
Length = 154
Score = 29.6 bits (65), Expect = 0.54
Identities = 20/75 (26%), Positives = 35/75 (46%), Gaps = 7/75 (9%)
Query: 5 PPATSAPQQPPGPEDEDSSLDESDLYSLAHS---YLGGGGRKGRTKREAAANTN----RP 57
P A +AP + P P+ E ++L + YS A + G ++ R +R+ + N R
Sbjct: 7 PRAPAAPPELPAPDPEQATLRPASRYSEAWERDLFAGSFSKEARRERKVCGSGNLGRPRR 66
Query: 58 SPGGHERKLVTKLQN 72
+ G RK ++ N
Sbjct: 67 ARSGKHRKGASRTPN 81
>gi|239750438 PREDICTED: hypothetical protein [Homo sapiens]
Length = 510
Score = 29.6 bits (65), Expect = 0.54
Identities = 20/71 (28%), Positives = 29/71 (40%), Gaps = 4/71 (5%)
Query: 11 PQQPPGPEDEDSSLDESDLYSLAHSYLGGGGRKGRTKREAAANTNRPSPGGHERKLVTKL 70
PQ GP+ + + L H LG G R+ +R R G ER+LVT+
Sbjct: 444 PQMRLGPQGGERDAGLGRPHQLIHDRLGQGARQRERRRAVGRQRQR----GEERRLVTQH 499
Query: 71 QNSERKKRGAR 81
+ +R R
Sbjct: 500 RAHGEVRRPVR 510
>gi|239748544 PREDICTED: hypothetical protein XP_002346718 [Homo
sapiens]
Length = 154
Score = 29.6 bits (65), Expect = 0.54
Identities = 20/75 (26%), Positives = 35/75 (46%), Gaps = 7/75 (9%)
Query: 5 PPATSAPQQPPGPEDEDSSLDESDLYSLAHS---YLGGGGRKGRTKREAAANTN----RP 57
P A +AP + P P+ E ++L + YS A + G ++ R +R+ + N R
Sbjct: 7 PRAPAAPPELPAPDPEQATLRPASRYSEAWERDLFAGSFSKEARRERKVCGSGNLGRPRR 66
Query: 58 SPGGHERKLVTKLQN 72
+ G RK ++ N
Sbjct: 67 ARSGKHRKGASRTPN 81
>gi|239742527 PREDICTED: hypothetical protein XP_002342542 [Homo
sapiens]
Length = 154
Score = 29.6 bits (65), Expect = 0.54
Identities = 20/75 (26%), Positives = 35/75 (46%), Gaps = 7/75 (9%)
Query: 5 PPATSAPQQPPGPEDEDSSLDESDLYSLAHS---YLGGGGRKGRTKREAAANTN----RP 57
P A +AP + P P+ E ++L + YS A + G ++ R +R+ + N R
Sbjct: 7 PRAPAAPPELPAPDPEQATLRPASRYSEAWERDLFAGSFSKEARRERKVCGSGNLGRPRR 66
Query: 58 SPGGHERKLVTKLQN 72
+ G RK ++ N
Sbjct: 67 ARSGKHRKGASRTPN 81
>gi|153792764 hypothetical protein LOC57624 [Homo sapiens]
Length = 653
Score = 29.3 bits (64), Expect = 0.71
Identities = 22/75 (29%), Positives = 30/75 (40%), Gaps = 5/75 (6%)
Query: 6 PATSAPQQPPGPEDEDSSLDESDLYSLAHSYLGGGGRKGRTKREAAANTNRPSPGGHERK 65
P S + P P +E +SL +S S L R+K A +T H +
Sbjct: 499 PGGSRSRTPTSPLEELTSL-----FSSGRSLLRKSSSGRRSKEPAEKSTEELKVRSHSTE 553
Query: 66 LVTKLQNSERKKRGA 80
+ KL N ER GA
Sbjct: 554 PLPKLDNKERGHHGA 568
>gi|102469037 jun D proto-oncogene [Homo sapiens]
Length = 347
Score = 29.3 bits (64), Expect = 0.71
Identities = 17/55 (30%), Positives = 23/55 (41%)
Query: 5 PPATSAPQQPPGPEDEDSSLDESDLYSLAHSYLGGGGRKGRTKREAAANTNRPSP 59
P T+ PPG ++ E+ +Y+ SY GG G G A A P P
Sbjct: 169 PSGTATGSAPPGELAPAAAAPEAPVYANLSSYAGGAGGAGGAATVAFAAEPVPFP 223
>gi|239753409 PREDICTED: similar to hCG1811893 [Homo sapiens]
Length = 669
Score = 29.3 bits (64), Expect = 0.71
Identities = 22/75 (29%), Positives = 30/75 (40%), Gaps = 5/75 (6%)
Query: 6 PATSAPQQPPGPEDEDSSLDESDLYSLAHSYLGGGGRKGRTKREAAANTNRPSPGGHERK 65
P S + P P +E +SL +S S L R+K A +T H +
Sbjct: 499 PGGSRSRTPTSPLEELTSL-----FSSGRSLLRKSSSGRRSKEPAEKSTEELKVRSHSTE 553
Query: 66 LVTKLQNSERKKRGA 80
+ KL N ER GA
Sbjct: 554 PLPKLDNKERGHHGA 568
>gi|148806908 fibronectin type III domain containing 1 [Homo sapiens]
Length = 1894
Score = 29.3 bits (64), Expect = 0.71
Identities = 19/76 (25%), Positives = 30/76 (39%), Gaps = 4/76 (5%)
Query: 5 PPATSAPQQPPGPEDEDSSLDESDLYSLAHSYLGGGGRKGRTKREAAANTNRPSPGGHER 64
PP + Q PGP+ D+ S L GR T + + +++ P
Sbjct: 1007 PPPVATSQHHPGPQSRDAGRSPSQ----PRLSLTQAGRPRPTSQGRSHSSSDPYTASSRG 1062
Query: 65 KLVTKLQNSERKKRGA 80
L T LQN + +G+
Sbjct: 1063 MLPTALQNQDEDAQGS 1078
>gi|40068464 AT rich interactive domain 1B (SWI1-like) isoform 2
[Homo sapiens]
Length = 2191
Score = 29.3 bits (64), Expect = 0.71
Identities = 21/76 (27%), Positives = 31/76 (40%), Gaps = 9/76 (11%)
Query: 6 PATSAPQQPPGPEDEDSS---LDESDLYSLAHSYLGGGGRKGRTKREAAANTN-----RP 57
P + P QPPG + E SS L +S + ++ G R + + T P
Sbjct: 702 PGSQMPPQPPGSQSESSSHPALSQSPM-PQERGFMAGTQRNPQMAQYGPQQTGPSMSPHP 760
Query: 58 SPGGHERKLVTKLQNS 73
SPGG ++ Q S
Sbjct: 761 SPGGQMHAGISSFQQS 776
>gi|40068466 AT rich interactive domain 1B (SWI1-like) isoform 1
[Homo sapiens]
Length = 2231
Score = 29.3 bits (64), Expect = 0.71
Identities = 21/76 (27%), Positives = 31/76 (40%), Gaps = 9/76 (11%)
Query: 6 PATSAPQQPPGPEDEDSS---LDESDLYSLAHSYLGGGGRKGRTKREAAANTN-----RP 57
P + P QPPG + E SS L +S + ++ G R + + T P
Sbjct: 689 PGSQMPPQPPGSQSESSSHPALSQSPM-PQERGFMAGTQRNPQMAQYGPQQTGPSMSPHP 747
Query: 58 SPGGHERKLVTKLQNS 73
SPGG ++ Q S
Sbjct: 748 SPGGQMHAGISSFQQS 763
>gi|40068462 AT rich interactive domain 1B (SWI1-like) isoform 3
[Homo sapiens]
Length = 2178
Score = 29.3 bits (64), Expect = 0.71
Identities = 21/76 (27%), Positives = 31/76 (40%), Gaps = 9/76 (11%)
Query: 6 PATSAPQQPPGPEDEDSS---LDESDLYSLAHSYLGGGGRKGRTKREAAANTN-----RP 57
P + P QPPG + E SS L +S + ++ G R + + T P
Sbjct: 689 PGSQMPPQPPGSQSESSSHPALSQSPM-PQERGFMAGTQRNPQMAQYGPQQTGPSMSPHP 747
Query: 58 SPGGHERKLVTKLQNS 73
SPGG ++ Q S
Sbjct: 748 SPGGQMHAGISSFQQS 763
>gi|13699803 WAS protein family, member 3 [Homo sapiens]
Length = 502
Score = 28.9 bits (63), Expect = 0.92
Identities = 12/30 (40%), Positives = 15/30 (50%)
Query: 1 MATFPPATSAPQQPPGPEDEDSSLDESDLY 30
+ T PP P PPGP SSL S ++
Sbjct: 391 LVTAPPPPGPPPPPPGPPGPGSSLSSSPMH 420
>gi|117190342 PHD finger protein 2 [Homo sapiens]
Length = 1096
Score = 28.5 bits (62), Expect = 1.2
Identities = 20/75 (26%), Positives = 33/75 (44%), Gaps = 12/75 (16%)
Query: 5 PPATSAPQQPPGPEDEDSSLDESDLYSLAHSYLGGGGRKGRTKREAAANT--NRPSPGGH 62
P P +PP P +L D GG +KG+ RE+A+ T N H
Sbjct: 502 PSKIPKPPKPPKPPRPPKTLKLKD----------GGKKKGKKSRESASPTIPNLDLLEAH 551
Query: 63 ERKLVTKLQNSERKK 77
++ +TK++ ++ K
Sbjct: 552 TKEALTKMEPPKKGK 566
>gi|28269687 zygote arrest 1 [Homo sapiens]
Length = 424
Score = 28.5 bits (62), Expect = 1.2
Identities = 19/62 (30%), Positives = 23/62 (37%)
Query: 2 ATFPPATSAPQQPPGPEDEDSSLDESDLYSLAHSYLGGGGRKGRTKREAAANTNRPSPGG 61
A++ P+ PP E + S L S G R G REAA PSP
Sbjct: 251 ASWEQPADGPELPPREAQEGEAAPRSALRSPGQPPSAGRARDGGDGREAAVAGEGPSPRS 310
Query: 62 HE 63
E
Sbjct: 311 PE 312
>gi|7662234 rab11-family interacting protein 3 isoform 1 [Homo
sapiens]
Length = 756
Score = 28.1 bits (61), Expect = 1.6
Identities = 13/33 (39%), Positives = 17/33 (51%)
Query: 1 MATFPPATSAPQQPPGPEDEDSSLDESDLYSLA 33
MA+ PPA+ +PPGP+ E D LA
Sbjct: 1 MASAPPASPPGSEPPGPDPEPGGPDGPGAAQLA 33
>gi|19882241 immunoglobulin superfamily, DCC subclass, member 4 [Homo
sapiens]
Length = 1250
Score = 28.1 bits (61), Expect = 1.6
Identities = 18/56 (32%), Positives = 27/56 (48%), Gaps = 2/56 (3%)
Query: 5 PPATSAPQQPPGPEDEDSSLDESDLYSLA--HSYLGGGGRKGRTKREAAANTNRPS 58
PPA + P +D S SD+ A HS +GGG +GR+ + + +PS
Sbjct: 1012 PPAAHELESLVHPHPQDWSPPPSDVEDRAEVHSLMGGGVSEGRSHSKRKISWAQPS 1067
>gi|209954788 activating transcription factor 6 beta isoform b [Homo
sapiens]
Length = 700
Score = 28.1 bits (61), Expect = 1.6
Identities = 10/18 (55%), Positives = 12/18 (66%)
Query: 5 PPATSAPQQPPGPEDEDS 22
PP + P QPPGP + DS
Sbjct: 544 PPVKAVPIQPPGPPERDS 561
>gi|20631977 activating transcription factor 6 beta isoform a [Homo
sapiens]
Length = 703
Score = 28.1 bits (61), Expect = 1.6
Identities = 10/18 (55%), Positives = 12/18 (66%)
Query: 5 PPATSAPQQPPGPEDEDS 22
PP + P QPPGP + DS
Sbjct: 547 PPVKAVPIQPPGPPERDS 564
>gi|78000163 sorbin and SH3 domain containing 1 isoform 3 [Homo
sapiens]
Length = 1292
Score = 27.7 bits (60), Expect = 2.1
Identities = 13/33 (39%), Positives = 18/33 (54%), Gaps = 3/33 (9%)
Query: 4 FPPATSAPQQPPGPEDEDSSLDESDLYSLAHSY 36
+ P P P P+ ED D+SDLYS +S+
Sbjct: 437 YTPTYQFPASTPSPKSED---DDSDLYSPRYSF 466
>gi|32698936 B-cell CLL/lymphoma 9-like [Homo sapiens]
Length = 1499
Score = 27.7 bits (60), Expect = 2.1
Identities = 18/56 (32%), Positives = 23/56 (41%), Gaps = 1/56 (1%)
Query: 6 PATSAPQQPPGPEDEDSSLDESDLYSLAHSYLGGGGRKGRTKREAAANTNRPSPGG 61
P ++ P PP EDSS D + S+ + GGG A N P P G
Sbjct: 314 PGSAPPALPPEGPPEDSSQDLAP-NSVGAASTGGGTGGTHPNTPTATTANNPLPPG 368
>gi|8922112 carbohydrate sulfotransferase 12 [Homo sapiens]
Length = 414
Score = 27.3 bits (59), Expect = 2.7
Identities = 15/61 (24%), Positives = 25/61 (40%), Gaps = 2/61 (3%)
Query: 6 PATSAPQQPPGPEDEDSSLDESDLYSLAHSYLGGGGRKGRTKREAAANTNRPSPGGHERK 65
P T P PGP+ + +SD+ +L G ++ R+ P+PG E
Sbjct: 43 PHTGPPLPTPGPDRDRELTADSDVDEFLDKFLSAGVKQSDLPRKETEQP--PAPGSMEES 100
Query: 66 L 66
+
Sbjct: 101 V 101
Database: hs.faa
Posted date: Aug 4, 2009 4:42 PM
Number of letters in database: 18,247,518
Number of sequences in database: 37,866
Lambda K H
0.306 0.127 0.362
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 4,446,831
Number of Sequences: 37866
Number of extensions: 213079
Number of successful extensions: 1061
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 29
Number of HSP's successfully gapped in prelim test: 62
Number of HSP's that attempted gapping in prelim test: 1017
Number of HSP's gapped (non-prelim): 104
length of query: 82
length of database: 18,247,518
effective HSP length: 54
effective length of query: 28
effective length of database: 16,202,754
effective search space: 453677112
effective search space used: 453677112
T: 11
A: 40
X1: 16 ( 7.1 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 43 (22.0 bits)
S2: 55 (25.8 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.