Guide to the Human Genome
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Name: NUPR1 Sequence: fasta or formatted (82aa) NCBI GI: 6912570
Description:

p8 protein isoform b

Referenced in:

Nucleus and Nucleolus

Other entries for this name:
alt prot [100aa] p8 protein isoform a
Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             9.8          8           3
 C cysteine            0.0          0           0
 D aspartate           4.9          4           1
 E glutamate           7.3          6           1
 F phenylalanine       1.2          1           1
 G glycine            11.0          9           4
 H histidine           2.4          2           1
 I isoleucine          0.0          0           0
 K lysine              7.3          6           2
 L leucine             7.3          6           1
 M methionine          1.2          1           1
 N asparagine          3.7          3           1
 P proline             9.8          8           2
 Q glutamine           3.7          3           2
 R arginine           11.0          9           2
 S serine              9.8          8           2
 T threonine           6.1          5           1
 V valine              1.2          1           1
 W tryptophan          0.0          0           0
 Y tyrosine            2.4          2           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   p8 protein isoform b 
NUPR1                 0.924   p8 protein isoform a 
LOC389493             0.248   hypothetical protein LOC389493 
RASSF5                0.055   Ras association (RalGDS/AF-6) domain family 5 isofor...
RASSF5                0.055   Ras association (RalGDS/AF-6) domain family 5 isofor...
LEMD3                 0.048   LEM domain containing 3 
LOC100291596          0.041   PREDICTED: hypothetical protein XP_002344746 
LOC100288068          0.041   PREDICTED: hypothetical protein XP_002343259 
INTS3                 0.034   integrator complex subunit 3 
LOC100292456          0.034   PREDICTED: hypothetical protein 
LOC100288068          0.034   PREDICTED: hypothetical protein 
LOC100289865          0.034   PREDICTED: hypothetical protein XP_002346718 
LOC100288522          0.034   PREDICTED: hypothetical protein XP_002342542 
KIAA1486              0.028   hypothetical protein LOC57624 
JUND                  0.028   jun D proto-oncogene 
LOC100293817          0.028   PREDICTED: similar to hCG1811893 
FNDC1                 0.028   fibronectin type III domain containing 1 
ARID1B                0.028   AT rich interactive domain 1B (SWI1-like) isoform 2 ...
ARID1B                0.028   AT rich interactive domain 1B (SWI1-like) isoform 1 ...
ARID1B                0.028   AT rich interactive domain 1B (SWI1-like) isoform 3 ...
WASF3                 0.028   WAS protein family, member 3 
PHF2                  0.021   PHD finger protein 2 
ZAR1                  0.021   zygote arrest 1 
RAB11FIP3             0.021   rab11-family interacting protein 3 isoform 1 
IGDCC4                0.021   immunoglobulin superfamily, DCC subclass, member 4 [...
ATF6B                 0.021   activating transcription factor 6 beta isoform b [H...
ATF6B                 0.021   activating transcription factor 6 beta isoform a [Ho...
SORBS1                0.021   sorbin and SH3 domain containing 1 isoform 3 
BCL9L                 0.021   B-cell CLL/lymphoma 9-like 
CHST12                0.014   carbohydrate sulfotransferase 12 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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