Guide to the Human Genome
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Name: NUPR1 Sequence: fasta or formatted (100aa) NCBI GI: 109948307
Description:

p8 protein isoform a

Referenced in:

Nucleus and Nucleolus

Other entries for this name:
alt prot [82aa] p8 protein isoform b
Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             9.0          9           3
 C cysteine            0.0          0           0
 D aspartate           4.0          4           1
 E glutamate           6.0          6           1
 F phenylalanine       1.0          1           1
 G glycine            10.0         10           4
 H histidine           2.0          2           1
 I isoleucine          1.0          1           1
 K lysine              6.0          6           2
 L leucine             9.0          9           1
 M methionine          3.0          3           1
 N asparagine          3.0          3           1
 P proline            13.0         13           2
 Q glutamine           3.0          3           2
 R arginine            9.0          9           2
 S serine              9.0          9           2
 T threonine           8.0          8           1
 V valine              2.0          2           1
 W tryptophan          0.0          0           0
 Y tyrosine            2.0          2           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   p8 protein isoform a 
NUPR1                 0.740   p8 protein isoform b 
LOC389493             0.171   hypothetical protein LOC389493 
BRSK1                 0.055   BR serine/threonine kinase 1 
CSPP1                 0.050   centrosome spindle pole associated protein 1 isofor...
CSPP1                 0.050   centrosome spindle pole associated protein 1 isofor...
RASSF5                0.039   Ras association (RalGDS/AF-6) domain family 5 isofor...
RASSF5                0.039   Ras association (RalGDS/AF-6) domain family 5 isofor...
VASP                  0.033   vasodilator-stimulated phosphoprotein 
IRS4                  0.028   insulin receptor substrate 4 
RAB11FIP3             0.028   rab11-family interacting protein 3 isoform 1 
MLLT6                 0.028   myeloid/lymphoid or mixed-lineage leukemia (trithora...
COL5A1                0.028   alpha 1 type V collagen preproprotein 
LOC100290612          0.028   PREDICTED: hypothetical protein XP_002348127 
MTX1                  0.022   metaxin 1 isoform 1 
SIN3A                 0.022   transcriptional co-repressor Sin3A 
SIN3A                 0.022   transcriptional co-repressor Sin3A 
SIN3A                 0.022   transcriptional co-repressor Sin3A 
MTX1                  0.022   metaxin 1 isoform 2 
LRBA                  0.022   LPS-responsive vesicle trafficking, beach and ancho...
LPHN1                 0.022   latrophilin 1 isoform 1 precursor 
LPHN1                 0.022   latrophilin 1 isoform 2 precursor 
LSM11                 0.022   LSM11, U7 small nuclear RNA associated 
MLL2                  0.022   myeloid/lymphoid or mixed-lineage leukemia 2 
SORBS1                0.022   sorbin and SH3 domain containing 1 isoform 3 
BCL9                  0.022   B-cell CLL/lymphoma 9 
WASF3                 0.022   WAS protein family, member 3 
FOXK1                 0.022   forkhead box K1 
MEX3C                 0.022   ring finger and KH domain containing 2 
TOB1                  0.017   transducer of ERBB2, 1 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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