Guide to the Human Genome
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Search of human proteins with 6912372

BLASTP 2.2.11 [Jun-05-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= gi|6912372 forkhead box D3 [Homo sapiens]
         (478 letters)

Database: hs.faa 
           37,866 sequences; 18,247,518 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gi|6912372 forkhead box D3 [Homo sapiens]                             960   0.0  
gi|4758392 forkhead box D1 [Homo sapiens]                             305   5e-83
gi|134142824 forkhead box D2 [Homo sapiens]                           284   1e-76
gi|18959276 forkhead box D4-like 1 [Homo sapiens]                     213   4e-55
gi|157042770 forkhead box D4-like 3 [Homo sapiens]                    205   8e-53
gi|146262007 forkhead box D4-like 6 [Homo sapiens]                    205   8e-53
gi|149944560 forkhead box D4-like 2 [Homo sapiens]                    204   1e-52
gi|76880472 forkhead box D4-like 4 [Homo sapiens]                     204   1e-52
gi|187423902 forkhead box D4-like 5 [Homo sapiens]                    204   2e-52
gi|21618325 forkhead box E1 [Homo sapiens]                            201   9e-52
gi|75677594 forkhead box D4 [Homo sapiens]                            201   2e-51
gi|119395716 forkhead box C1 [Homo sapiens]                           187   1e-47
gi|4885237 forkhead box C2 [Homo sapiens]                             187   2e-47
gi|12751477 forkhead box L2 [Homo sapiens]                            180   3e-45
gi|11386197 forkhead box E3 [Homo sapiens]                            174   2e-43
gi|61966923 forkhead box B2 [Homo sapiens]                            172   5e-43
gi|4557595 forkhead box F2 [Homo sapiens]                             169   5e-42
gi|22779860 forkhead box L1 [Homo sapiens]                            169   5e-42
gi|24497504 forkhead box A2 isoform 2 [Homo sapiens]                  165   1e-40
gi|194394143 forkhead box A2 isoform 1 [Homo sapiens]                 165   1e-40
gi|32307177 forkhead box G1 [Homo sapiens]                            160   2e-39
gi|105554437 forkhead box B1 [Homo sapiens]                           160   2e-39
gi|110735445 forkhead box F1 [Homo sapiens]                           159   4e-39
gi|195947376 forkhead box I2 [Homo sapiens]                           159   5e-39
gi|24497506 forkhead box A3 [Homo sapiens]                            154   1e-37
gi|145309320 forkhead box Q1 [Homo sapiens]                           153   3e-37
gi|208431824 forkhead box I3 [Homo sapiens]                           153   3e-37
gi|28973785 forkhead box S1 [Homo sapiens]                            152   8e-37
gi|24497501 forkhead box A1 [Homo sapiens]                            148   1e-35
gi|21618327 forkhead box I1 isoform a [Homo sapiens]                  143   3e-34

>gi|6912372 forkhead box D3 [Homo sapiens]
          Length = 478

 Score =  960 bits (2482), Expect = 0.0
 Identities = 478/478 (100%), Positives = 478/478 (100%)

Query: 1   MTLSGGGSASDMSGQTVLTAEDVDIDVVGEGDDGLEEKDSDAGCDSPAGPPELRLDEADE 60
           MTLSGGGSASDMSGQTVLTAEDVDIDVVGEGDDGLEEKDSDAGCDSPAGPPELRLDEADE
Sbjct: 1   MTLSGGGSASDMSGQTVLTAEDVDIDVVGEGDDGLEEKDSDAGCDSPAGPPELRLDEADE 60

Query: 61  VPPAAPHHGQPQPPHQQPLTLPKEAAGAGAGPGGDVGAPEADGCKGGVGGEEGGASGGGP 120
           VPPAAPHHGQPQPPHQQPLTLPKEAAGAGAGPGGDVGAPEADGCKGGVGGEEGGASGGGP
Sbjct: 61  VPPAAPHHGQPQPPHQQPLTLPKEAAGAGAGPGGDVGAPEADGCKGGVGGEEGGASGGGP 120

Query: 121 GAGSGSAGGLAPSKPKNSLVKPPYSYIALITMAILQSPQKKLTLSGICEFISNRFPYYRE 180
           GAGSGSAGGLAPSKPKNSLVKPPYSYIALITMAILQSPQKKLTLSGICEFISNRFPYYRE
Sbjct: 121 GAGSGSAGGLAPSKPKNSLVKPPYSYIALITMAILQSPQKKLTLSGICEFISNRFPYYRE 180

Query: 181 KFPAWQNSIRHNLSLNDCFVKIPREPGNPGKGNYWTLDPQSEDMFDNGSFLRRRKRFKRH 240
           KFPAWQNSIRHNLSLNDCFVKIPREPGNPGKGNYWTLDPQSEDMFDNGSFLRRRKRFKRH
Sbjct: 181 KFPAWQNSIRHNLSLNDCFVKIPREPGNPGKGNYWTLDPQSEDMFDNGSFLRRRKRFKRH 240

Query: 241 QQEHLREQTALMMQSFGAYSLAAAAGAAGPYGRPYGLHPAAAAGAYSHPAAAAAAAAAAA 300
           QQEHLREQTALMMQSFGAYSLAAAAGAAGPYGRPYGLHPAAAAGAYSHPAAAAAAAAAAA
Sbjct: 241 QQEHLREQTALMMQSFGAYSLAAAAGAAGPYGRPYGLHPAAAAGAYSHPAAAAAAAAAAA 300

Query: 301 LQYPYALPPVAPVLPPAVPLLPSGELGRKAAAFGSQLGPGLQLQLNSLGAAAAAAGTAGA 360
           LQYPYALPPVAPVLPPAVPLLPSGELGRKAAAFGSQLGPGLQLQLNSLGAAAAAAGTAGA
Sbjct: 301 LQYPYALPPVAPVLPPAVPLLPSGELGRKAAAFGSQLGPGLQLQLNSLGAAAAAAGTAGA 360

Query: 361 AGTTASLIKSEPSARPSFSIENIIGGGPAAPGGSAVGAGVAGGTGGSGGGSTAQSFLRPP 420
           AGTTASLIKSEPSARPSFSIENIIGGGPAAPGGSAVGAGVAGGTGGSGGGSTAQSFLRPP
Sbjct: 361 AGTTASLIKSEPSARPSFSIENIIGGGPAAPGGSAVGAGVAGGTGGSGGGSTAQSFLRPP 420

Query: 421 GTVQSAALMATHQPLSLSRTTATIAPILSVPLSGQFLQPAASAAAAAAAAAQAKWPAQ 478
           GTVQSAALMATHQPLSLSRTTATIAPILSVPLSGQFLQPAASAAAAAAAAAQAKWPAQ
Sbjct: 421 GTVQSAALMATHQPLSLSRTTATIAPILSVPLSGQFLQPAASAAAAAAAAAQAKWPAQ 478


>gi|4758392 forkhead box D1 [Homo sapiens]
          Length = 465

 Score =  305 bits (782), Expect = 5e-83
 Identities = 224/503 (44%), Positives = 260/503 (51%), Gaps = 113/503 (22%)

Query: 1   MTLSGGGSASDMSGQTVLTAEDVDIDVVGEGDDGL---EEKDSDAGCDSP---------- 47
           MTLS     SD SG     AE+ DIDVVGEG+D     EE D + G   P          
Sbjct: 1   MTLST--EMSDASG----LAEETDIDVVGEGEDEEDEEEEDDDEGGGGGPRLAVPAQRRR 54

Query: 48  -----AGPPELR----LDEADEVPPAAPHHGQPQPPHQQPLTLPKEAAGAGAGPGGDVGA 98
                AG  EL      ++ D++  A P  G P PP   P      AAGAGAG GG    
Sbjct: 55  RRRSYAGEDELEDLEEEEDDDDILLAPPAGGSPAPPGPAP------AAGAGAGGGGG--- 105

Query: 99  PEADGCKGGVGGEEGGASGGGPGAGSGSAGGLAPSKPKNSLVKPPYSYIALITMAILQSP 158
                         GG +GGG  AGSG+         KN LVKPPYSYIALITMAILQSP
Sbjct: 106 --------------GGGAGGGGSAGSGA---------KNPLVKPPYSYIALITMAILQSP 142

Query: 159 QKKLTLSGICEFISNRFPYYREKFPAWQNSIRHNLSLNDCFVKIPREPGNPGKGNYWTLD 218
           +K+LTLS ICEFIS RFPYYREKFPAWQNSIRHNLSLNDCFVKIPREPGNPGKGNYWTLD
Sbjct: 143 KKRLTLSEICEFISGRFPYYREKFPAWQNSIRHNLSLNDCFVKIPREPGNPGKGNYWTLD 202

Query: 219 PQSEDMFDNGSFLRRRKRFKRHQ--QEHLREQTALMMQSFGAYSLAAAAGAA-------- 268
           P+S DMFDNGSFLRRRKRFKR      +     +L+++  GA   A    AA        
Sbjct: 203 PESADMFDNGSFLRRRKRFKRQPLLPPNAAAAESLLLRGAGAAGGAGDPAAAAALFPPAP 262

Query: 269 ---------GPYGRPYGLHPAAAAGAYSHPAAAAAAAAAAALQYPYALPPVAPVLPPAVP 319
                    GPYG  YGL     A   +  AAAAAAAAAAA  +P++ P      PP  P
Sbjct: 263 PPPPHAYGYGPYGCGYGLQLPPYAPPSALFAAAAAAAAAAAF-HPHSPP------PPPPP 315

Query: 320 LLPSGELGRKAAAFGSQLGPGLQLQLNSLGAAAAAAGTAGAAGTTASLIKSEPSARPSFS 379
              + EL R   AFG +  P        L A+AA AG  GA+            AR  FS
Sbjct: 316 HGAAAELAR--TAFGYRPHPLGAALPGPLPASAAKAGGPGASAL----------ARSPFS 363

Query: 380 IENIIGG--GPAAPGGSAVGAGVAG-------------GTGGSGGGSTAQSFLRPPGTVQ 424
           IE+IIGG  GPAA   +A  A  A                G SGGG  AQ+ + P   + 
Sbjct: 364 IESIIGGSLGPAAAAAAAAQAAAAAQASPSPSPVAAPPAPGSSGGGCAAQAAVGPAAALT 423

Query: 425 SAALMATHQPLSLSRTTATIAPI 447
            + + A     S   ++A +  +
Sbjct: 424 RSLVAAAAAAASSVSSSAALGTL 446



 Score = 34.3 bits (77), Expect = 0.26
 Identities = 24/73 (32%), Positives = 31/73 (42%), Gaps = 8/73 (10%)

Query: 385 GGGPAAPGGS-AVGAGVAG-------GTGGSGGGSTAQSFLRPPGTVQSAALMATHQPLS 436
           GG PA PG + A GAG  G       G GGS G       ++PP +  +   MA  Q   
Sbjct: 84  GGSPAPPGPAPAAGAGAGGGGGGGGAGGGGSAGSGAKNPLVKPPYSYIALITMAILQSPK 143

Query: 437 LSRTTATIAPILS 449
              T + I   +S
Sbjct: 144 KRLTLSEICEFIS 156


>gi|134142824 forkhead box D2 [Homo sapiens]
          Length = 495

 Score =  284 bits (726), Expect = 1e-76
 Identities = 203/461 (44%), Positives = 234/461 (50%), Gaps = 78/461 (16%)

Query: 10  SDMSGQTVLTAEDVDIDVVGEGDDGLEEKDSDAGCDSPAGPPELRLDEADEVPPAAPHHG 69
           S  S    L+  D DIDVVG G  G E         + +GP   R    D +P     HG
Sbjct: 12  SSESSPAALSEADADIDVVGGGSGGGE-------LPARSGPRAPR----DVLP-----HG 55

Query: 70  QPQPPHQQPLTLPKEAAGAGAGPGGDV------GAPEADGCKGGVGGEEGGASGGGPGAG 123
              P  +    L ++   +G    G+       GA  A G  G       GA+G GPG  
Sbjct: 56  HEPPAEEAEADLAEDEEESGGCSDGEPRALASRGAAAAAGSPGPGAAAARGAAGPGPGPP 115

Query: 124 SGSAGGLAPSKPKNSLVKPPYSYIALITMAILQSPQKKLTLSGICEFISNRFPYYREKFP 183
           SG A   +P      LVKPPYSYIALITMAILQSP+K+LTLS ICEFIS RFPYYREKFP
Sbjct: 116 SGGAATRSP------LVKPPYSYIALITMAILQSPKKRLTLSEICEFISGRFPYYREKFP 169

Query: 184 AWQNSIRHNLSLNDCFVKIPREPGNPGKGNYWTLDPQSEDMFDNGSFLRRRKRFKR---- 239
           AWQNSIRHNLSLNDCFVKIPREPGNPGKGNYWTLDP+S DMFDNGSFLRRRKRFKR    
Sbjct: 170 AWQNSIRHNLSLNDCFVKIPREPGNPGKGNYWTLDPESADMFDNGSFLRRRKRFKRQPLP 229

Query: 240 --HQQEHLREQTALMMQSFGAYSLAA---AAGAAGPYGRPYGL--------HPAAAAGAY 286
             H   H   +  L   +  A    A      A G YG  YGL         P  A   +
Sbjct: 230 PPHPHPHPHPELLLRGGAAAAGDPGAFLPGFAAYGAYGYGYGLALPAYGAPPPGPAPHPH 289

Query: 287 SHPAAAAAAAAAAALQYPYALPPVAPVLPPAVPLLPS-----GELGRKAAAFGSQLGPG- 340
            HP A A AAAAAA     ++PP     PP  P   S     G     A A GS  GPG 
Sbjct: 290 PHPHAFAFAAAAAAAPCQLSVPPGRAAAPPPGPPTASVFAGAGSAPAPAPASGSGPGPGP 349

Query: 341 ------LQLQLNSLGAAAAAAGTAGAAGTTASL--------IKSEPSA-----------R 375
                 L  +L    A  AA+ +  AAGT A L        +K++              R
Sbjct: 350 AGLPAFLGAELGCAKAFYAASLSPPAAGTAAGLPTALLRQGLKTDAGGGAGGGGAGAGQR 409

Query: 376 PSFSIENII--GGGPAAPGGSAVGAGVAGGTGGSGGGSTAQ 414
           PSFSI++I+  GGG AAP G+  G+        +G G  AQ
Sbjct: 410 PSFSIDHIMGHGGGGAAPPGAGEGSPGPPFAAAAGPGGQAQ 450



 Score = 29.6 bits (65), Expect = 6.3
 Identities = 21/70 (30%), Positives = 28/70 (40%), Gaps = 6/70 (8%)

Query: 386 GGPAAPGGSAVGAGVAGGTGG------SGGGSTAQSFLRPPGTVQSAALMATHQPLSLSR 439
           G  AA G    GA  A G  G      SGG +T    ++PP +  +   MA  Q      
Sbjct: 89  GAAAAAGSPGPGAAAARGAAGPGPGPPSGGAATRSPLVKPPYSYIALITMAILQSPKKRL 148

Query: 440 TTATIAPILS 449
           T + I   +S
Sbjct: 149 TLSEICEFIS 158


>gi|18959276 forkhead box D4-like 1 [Homo sapiens]
          Length = 408

 Score =  213 bits (541), Expect = 4e-55
 Identities = 155/352 (44%), Positives = 171/352 (48%), Gaps = 58/352 (16%)

Query: 106 GGVGGEEGGASGGGPGAGS-------GSAGGLAPSKPKNSLVKPPYSYIALITMAILQSP 158
           GGV        GGGP   S             A S+      KPPYSYIALITMAILQSP
Sbjct: 65  GGVALPREHIEGGGPSDPSEFGTEFRAPPRSAAASEDARQPAKPPYSYIALITMAILQSP 124

Query: 159 QKKLTLSGICEFISNRFPYYREKFPAWQNSIRHNLSLNDCFVKIPREPGNPGKGNYWTLD 218
            K+LTLSGIC FIS RFPYYR KFPAWQNSIRHNLSLNDCFVKIPREPG+PGKG YW+LD
Sbjct: 125 HKRLTLSGICAFISGRFPYYRRKFPAWQNSIRHNLSLNDCFVKIPREPGHPGKGTYWSLD 184

Query: 219 PQSEDMFDNGSFLRRRKRFKRHQ---QEHLREQTALMMQS-----------FGAYSLAAA 264
           P S+DMFDNGSFLRRRKRFKRHQ     HL     L                GA +L   
Sbjct: 185 PASQDMFDNGSFLRRRKRFKRHQLTPGAHLPHPFPLPAAHAALHNPRPGPLLGAPALPQP 244

Query: 265 AGAA----GPYGRPYG-LHPAAAAGAYSHP-------AAAAAAAAAAALQYPYALPPVAP 312
              A     P  RPY  LHP        HP       A A A A   A     A P   P
Sbjct: 245 VPGAYPNTAPGRRPYALLHP--------HPPRYLLLSAPAYAGAPKKAEGADLATPGTLP 296

Query: 313 VLPPAVPLLPSGELGRKAAAFGSQLGPGLQLQLNSLGAAAAAAGTAGAAGTTASLIKSEP 372
           VL P++   P  E    A+  G   G  +   + S+      AGT  A   + +     P
Sbjct: 297 VLQPSLGPQPWEEGKGLASPPG---GGCISFSIESIMQGVRGAGTGAAQSLSPTAWSYCP 353

Query: 373 -SARPSFSIENIIGGGPAAPGG--------SAVGAGVA-----GGTGGSGGG 410
              RPS   +N      A+ GG           GAG A     G    SGGG
Sbjct: 354 LLQRPSSLSDNFAATAAASGGGLRQRLRSHQGRGAGRAPVGRVGAAAVSGGG 405


>gi|157042770 forkhead box D4-like 3 [Homo sapiens]
          Length = 417

 Score =  205 bits (521), Expect = 8e-53
 Identities = 139/318 (43%), Positives = 157/318 (49%), Gaps = 61/318 (19%)

Query: 21  EDVDIDVVGEGDDGLEEKDSDAGCDSPAGPPELRLDEADEVPPAAPHHGQP--QPPHQQP 78
           ED  IDV+GE +D  E +D +           L                QP  Q      
Sbjct: 23  EDGKIDVLGEEEDEDEVEDEEEAASQQFLEQSL----------------QPGLQVARWGG 66

Query: 79  LTLPKEAAGAGAGPGGDVGAPEADGCKGGVGGEEGGASGGGPGAGSGSAGGLAPSKPKNS 138
           + LP+E    G GP                  E G      P + + S     P+KP   
Sbjct: 67  VALPREHIEGGGGPSDP--------------SEFGTKFRAPPRSAAASEDARQPAKP--- 109

Query: 139 LVKPPYSYIALITMAILQSPQKKLTLSGICEFISNRFPYYREKFPAWQNSIRHNLSLNDC 198
               PYSYIALITMAILQ+P K+LTLSGIC FIS RFPYYR KFPAWQNSIRHNLSLNDC
Sbjct: 110 ----PYSYIALITMAILQNPHKRLTLSGICAFISGRFPYYRRKFPAWQNSIRHNLSLNDC 165

Query: 199 FVKIPREPGNPGKGNYWTLDPQSEDMFDNGSFLRRRKRFKRHQ---QEHLREQTALMMQS 255
           FVKIPREPG+PGKGNYW+LDP S+DMFDNGSFLRRRKRFKRHQ     HL     L    
Sbjct: 166 FVKIPREPGHPGKGNYWSLDPASQDMFDNGSFLRRRKRFKRHQLTPGAHLPHPFPLPAAH 225

Query: 256 FGAYS--LAAAAGAAGPYGRPYGLHPAAAAG----AYSHP-------------AAAAAAA 296
              ++       GA  P     G +P  A G    A  HP             A A   A
Sbjct: 226 AALHNPRPGPLLGAPAPPQPVPGAYPNTAPGRRPYALLHPHPLRYLLLSAPVYAGAPKKA 285

Query: 297 AAAALQYPYALPPVAPVL 314
             AAL  P   P  +P L
Sbjct: 286 EGAALATPAPFPCCSPHL 303


>gi|146262007 forkhead box D4-like 6 [Homo sapiens]
          Length = 417

 Score =  205 bits (521), Expect = 8e-53
 Identities = 139/318 (43%), Positives = 157/318 (49%), Gaps = 61/318 (19%)

Query: 21  EDVDIDVVGEGDDGLEEKDSDAGCDSPAGPPELRLDEADEVPPAAPHHGQP--QPPHQQP 78
           ED  IDV+GE +D  E +D +           L                QP  Q      
Sbjct: 23  EDGKIDVLGEEEDEDEVEDEEEAASQQFLEQSL----------------QPGLQVARWGG 66

Query: 79  LTLPKEAAGAGAGPGGDVGAPEADGCKGGVGGEEGGASGGGPGAGSGSAGGLAPSKPKNS 138
           + LP+E    G GP                  E G      P + + S     P+KP   
Sbjct: 67  VALPREHIEGGGGPSDP--------------SEFGTKFRAPPRSAAASEDARQPAKP--- 109

Query: 139 LVKPPYSYIALITMAILQSPQKKLTLSGICEFISNRFPYYREKFPAWQNSIRHNLSLNDC 198
               PYSYIALITMAILQ+P K+LTLSGIC FIS RFPYYR KFPAWQNSIRHNLSLNDC
Sbjct: 110 ----PYSYIALITMAILQNPHKRLTLSGICAFISGRFPYYRRKFPAWQNSIRHNLSLNDC 165

Query: 199 FVKIPREPGNPGKGNYWTLDPQSEDMFDNGSFLRRRKRFKRHQ---QEHLREQTALMMQS 255
           FVKIPREPG+PGKGNYW+LDP S+DMFDNGSFLRRRKRFKRHQ     HL     L    
Sbjct: 166 FVKIPREPGHPGKGNYWSLDPASQDMFDNGSFLRRRKRFKRHQLTPGAHLPHPFPLPAAH 225

Query: 256 FGAYS--LAAAAGAAGPYGRPYGLHPAAAAG----AYSHP-------------AAAAAAA 296
              ++       GA  P     G +P  A G    A  HP             A A   A
Sbjct: 226 AALHNPHPGPLLGAPAPPQPVPGAYPNTAPGRRPYALLHPHPLRYLLLSAPVYAGAPKKA 285

Query: 297 AAAALQYPYALPPVAPVL 314
             AAL  P   P  +P L
Sbjct: 286 EGAALATPAPFPCCSPHL 303


>gi|149944560 forkhead box D4-like 2 [Homo sapiens]
          Length = 416

 Score =  204 bits (519), Expect = 1e-52
 Identities = 117/225 (52%), Positives = 130/225 (57%), Gaps = 32/225 (14%)

Query: 106 GGVGGEEGGASGGGPGAGSGSAGGLAPSKPKNSLV--------KPPYSYIALITMAILQS 157
           GGV        GGG  +     G    + P+++          KPPYSYIALITMAILQ+
Sbjct: 65  GGVALPREHIEGGGGPSDPSEFGTKFRAPPRSAAASEDARQPAKPPYSYIALITMAILQN 124

Query: 158 PQKKLTLSGICEFISNRFPYYREKFPAWQNSIRHNLSLNDCFVKIPREPGNPGKGNYWTL 217
           P K+LTLSGIC FIS RFPYYR KFPAWQNSIRHNLSLNDCFVKIPREPG+PGKGNYW+L
Sbjct: 125 PHKRLTLSGICAFISGRFPYYRRKFPAWQNSIRHNLSLNDCFVKIPREPGHPGKGNYWSL 184

Query: 218 DPQSEDMFDNGSFLRRRKRFKRHQQEHLREQTALMMQSFGAYSLAAAAGAAGPYGRPYGL 277
           DP S+DMFDNGSFLRRRKRFKRHQ                        GA  P+  P   
Sbjct: 185 DPASQDMFDNGSFLRRRKRFKRHQ---------------------LTPGAHLPHPFPL-- 221

Query: 278 HPAAAAGAYSHPAAAAAAAAAAALQYPYALPPVAPVLPPAVPLLP 322
            PAA A  ++        A A     P A P  AP   P   L P
Sbjct: 222 -PAAHAALHNPHPGPLLGAPAPPQPVPGAYPNTAPGRRPYALLHP 265


>gi|76880472 forkhead box D4-like 4 [Homo sapiens]
          Length = 416

 Score =  204 bits (519), Expect = 1e-52
 Identities = 117/225 (52%), Positives = 130/225 (57%), Gaps = 32/225 (14%)

Query: 106 GGVGGEEGGASGGGPGAGSGSAGGLAPSKPKNSLV--------KPPYSYIALITMAILQS 157
           GGV        GGG  +     G    + P+++          KPPYSYIALITMAILQ+
Sbjct: 65  GGVALPREHIEGGGGPSDPSEFGTKFRAPPRSAAASEDARQPAKPPYSYIALITMAILQN 124

Query: 158 PQKKLTLSGICEFISNRFPYYREKFPAWQNSIRHNLSLNDCFVKIPREPGNPGKGNYWTL 217
           P K+LTLSGIC FIS RFPYYR KFPAWQNSIRHNLSLNDCFVKIPREPG+PGKGNYW+L
Sbjct: 125 PHKRLTLSGICAFISGRFPYYRRKFPAWQNSIRHNLSLNDCFVKIPREPGHPGKGNYWSL 184

Query: 218 DPQSEDMFDNGSFLRRRKRFKRHQQEHLREQTALMMQSFGAYSLAAAAGAAGPYGRPYGL 277
           DP S+DMFDNGSFLRRRKRFKRHQ                        GA  P+  P   
Sbjct: 185 DPASQDMFDNGSFLRRRKRFKRHQ---------------------LTPGAHLPHPFPL-- 221

Query: 278 HPAAAAGAYSHPAAAAAAAAAAALQYPYALPPVAPVLPPAVPLLP 322
            PAA A  ++        A A     P A P  AP   P   L P
Sbjct: 222 -PAAHAALHNPHPGPLLGAPAPPQPVPGAYPNTAPGRRPYALLHP 265


>gi|187423902 forkhead box D4-like 5 [Homo sapiens]
          Length = 416

 Score =  204 bits (518), Expect = 2e-52
 Identities = 117/225 (52%), Positives = 130/225 (57%), Gaps = 32/225 (14%)

Query: 106 GGVGGEEGGASGGGPGAGSGSAGGLAPSKPKNSLV--------KPPYSYIALITMAILQS 157
           GGV        GGG  +     G    + P+++          KPPYSYIALITMAILQ+
Sbjct: 65  GGVALPREHIEGGGGPSDPSEFGTKFRAPPRSAAASEDARQPAKPPYSYIALITMAILQN 124

Query: 158 PQKKLTLSGICEFISNRFPYYREKFPAWQNSIRHNLSLNDCFVKIPREPGNPGKGNYWTL 217
           P K+LTLSGIC FIS RFPYYR KFPAWQNSIRHNLSLNDCFVKIPREPG+PGKGNYW+L
Sbjct: 125 PHKRLTLSGICAFISGRFPYYRRKFPAWQNSIRHNLSLNDCFVKIPREPGHPGKGNYWSL 184

Query: 218 DPQSEDMFDNGSFLRRRKRFKRHQQEHLREQTALMMQSFGAYSLAAAAGAAGPYGRPYGL 277
           DP S+DMFDNGSFLRRRKRFKRHQ                        GA  P+  P   
Sbjct: 185 DPASQDMFDNGSFLRRRKRFKRHQ---------------------LTPGAHLPHPFPL-- 221

Query: 278 HPAAAAGAYSHPAAAAAAAAAAALQYPYALPPVAPVLPPAVPLLP 322
            PAA A  ++        A A     P A P  AP   P   L P
Sbjct: 222 -PAAHAALHNPHPGPLLGAPAPPQPVPGAYPNTAPGRCPYALLHP 265


>gi|21618325 forkhead box E1 [Homo sapiens]
          Length = 373

 Score =  201 bits (512), Expect = 9e-52
 Identities = 142/338 (42%), Positives = 166/338 (49%), Gaps = 34/338 (10%)

Query: 112 EGGASGGGPGAGSGSAGGLAPSKPKNSLVKPPYSYIALITMAILQSPQKKLTLSGICEFI 171
           E  A  G PG  +G   G    K      KPPYSYIALI MAI  +P+++LTL GI +FI
Sbjct: 24  ETAAGAGVPGEATGRGAGGRRRKRPLQRGKPPYSYIALIAMAIAHAPERRLTLGGIYKFI 83

Query: 172 SNRFPYYREKFPAWQNSIRHNLSLNDCFVKIPREPGNPGKGNYWTLDPQSEDMFDNGSFL 231
           + RFP+YR+    WQNSIRHNL+LNDCF+KIPRE G PGKGNYW LDP +EDMF++GSFL
Sbjct: 84  TERFPFYRDNPKKWQNSIRHNLTLNDCFLKIPREAGRPGKGNYWALDPNAEDMFESGSFL 143

Query: 232 RRRKRFKRHQQEHLREQTALMMQSFGAYSLAAAAGAAG-------PYGRPYGLHPAAAAG 284
           RRRKRFKR     L    A M  +  A + AAAA AA        P  RP   +P A   
Sbjct: 144 RRRKRFKR---SDLSTYPAYMHDAAAAAAAAAAAAAAAAIFPGAVPAARP--PYPGAVYA 198

Query: 285 AYSHPAAAAAAAAAAALQYPYALPPVAPV--LPPAVPLLPSGELGRKAAAFGSQLGPGLQ 342
            Y+ P    + AA   + YP A P    V  L P  PL P  ELG   +      GPG  
Sbjct: 199 GYAPP----SLAAPPPVYYPAASPGPCRVFGLVPERPLSP--ELGPAPS------GPGGS 246

Query: 343 LQLNSLGAAAAAAGTAGAAGTTASLIKSEPS------ARPSFSIENIIGGGPAAPGGSAV 396
               S GA A   G   A  T A    + PS      A P  +     G    A  G   
Sbjct: 247 CAFASAGAPATTTGYQPAGCTGAR--PANPSAYAAAYAGPDGAYPQGAGSAIFAAAGRLA 304

Query: 397 GAGVAGGTGGSGGGSTAQSFLRPPGTVQSAALMATHQP 434
           G       G SGG  T   F       Q  AL A + P
Sbjct: 305 GPASPPAGGSSGGVETTVDFYGRTSPGQFGALGACYNP 342


>gi|75677594 forkhead box D4 [Homo sapiens]
          Length = 439

 Score =  201 bits (510), Expect = 2e-51
 Identities = 142/319 (44%), Positives = 162/319 (50%), Gaps = 67/319 (21%)

Query: 21  EDVDIDVVGEGDDGLEEKDSDAGCDSPAGPPELRLDEADEVPPAAPHHGQPQPPHQQPLT 80
           ED  IDV+GE +D  EE+ +       +  P L++     V                   
Sbjct: 23  EDGKIDVLGEEEDEDEEEAASQQFLEQSLQPGLQVARWGGV------------------A 64

Query: 81  LPKEAAGAGAGPGGDVGAPEADGCKGGVGGEEGGASGGGPGAGSGSAGGLAPSKPKNSLV 140
           LP+E    G GP                  E G      P + + S     P+       
Sbjct: 65  LPREHIEGGGGPSDP--------------SEFGTEFRAPPRSAAASEDARQPA------- 103

Query: 141 KPPYSYIALITMAILQSPQKKLTLSGICEFISNRFPYYREKFPAWQNSIRHNLSLNDCFV 200
           KPP SYIALITMAILQSP K+LTLSGIC FIS+RFPYYR KFPAWQNSIRHNLSLNDCFV
Sbjct: 104 KPPSSYIALITMAILQSPHKRLTLSGICAFISDRFPYYRRKFPAWQNSIRHNLSLNDCFV 163

Query: 201 KIPREPGNPGKGNYWTLDPQSEDMFDNGSFLRRRKRFKRHQQ---EHLREQTALMMQSFG 257
           KIPREPG PGKGNYW+LDP S+DMFDNGSFLRRRKRF+RHQ     HL     L      
Sbjct: 164 KIPREPGRPGKGNYWSLDPASQDMFDNGSFLRRRKRFQRHQPTPGAHLPHPFPLPAAHAA 223

Query: 258 AYS------LAAAA------GA---AGPYGRPYG-LHP------AAAAGAYSHPAAAAAA 295
            ++      L A A      GA    GP  RPY  LHP        +A AY   A A   
Sbjct: 224 LHNPRPGPLLGAPAPPQPVPGAYPNTGPGRRPYALLHPHPPRYLLLSAPAY---AGAPKK 280

Query: 296 AAAAALQYPYALPPVAPVL 314
           A  A L  P   P  +P L
Sbjct: 281 AEGADLATPAPFPCCSPHL 299


>gi|119395716 forkhead box C1 [Homo sapiens]
          Length = 553

 Score =  187 bits (476), Expect = 1e-47
 Identities = 162/494 (32%), Positives = 215/494 (43%), Gaps = 124/494 (25%)

Query: 96  VGAPEADGCKGGVGGEEG------GASGGG--------------------PGAGSGSAGG 129
           V +P + G    +GGE+        A+GGG                    PG  + + G 
Sbjct: 7   VSSPNSLGVVPYLGGEQSYYRAAAAAAGGGYTAMPAPMSVYSHPAHAEQYPGGMARAYGP 66

Query: 130 LAPSKPKNSLVKPPYSYIALITMAILQSPQKKLTLSGICEFISNRFPYYREKFPAWQNSI 189
             P      +VKPPYSYIALITMAI  +P KK+TL+GI +FI +RFP+YR+    WQNSI
Sbjct: 67  YTPQPQPKDMVKPPYSYIALITMAIQNAPDKKITLNGIYQFIMDRFPFYRDNKQGWQNSI 126

Query: 190 RHNLSLNDCFVKIPREPGNPGKGNYWTLDPQSEDMFDNGSFLRRRKRFKR---------H 240
           RHNLSLN+CFVK+PR+   PGKG+YWTLDP S +MF+NGSFLRRR+RFK+          
Sbjct: 127 RHNLSLNECFVKVPRDDKKPGKGSYWTLDPDSYNMFENGSFLRRRRRFKKKDAVKDKEEK 186

Query: 241 QQEHLREQTALMMQSFGAYSLAAAAGAAGPY-----------------GRPYGLHPAAAA 283
            + HL+E      Q   A    A   A GP                    P  L PAAA 
Sbjct: 187 DRLHLKEPPPPGRQPPPAPPEQADGNAPGPQPPPVRIQDIKTENGTCPSPPQPLSPAAAL 246

Query: 284 GAYSHPAA-------AAAAAAAAALQYPYALPPVAPVL--------PPAVPLLPSGELGR 328
           G+ S  A        +++++ ++    P +LP   P+         PP  P  P     +
Sbjct: 247 GSGSAAAVPKIESPDSSSSSLSSGSSPPGSLPSARPLSLDGADSAPPPPAPSAPPPHHSQ 306

Query: 329 -------KAAAFGSQLGPGLQLQLNSLGAAAAA--AGTA-----GAAGTTASLIKSEPSA 374
                    +  GS      +L    L +AAA+  AG A     GA     S + S P +
Sbjct: 307 GFSVDNIMTSLRGSPQSAAAELSSGLLASAAASSRAGIAPPLALGAYSPGQSSLYSSPCS 366

Query: 375 RPSFSIENIIGGGPAAPGGSAVGA-----------------------GVAGGTGGSGGGS 411
           + S +  +  GGG A   G A GA                       G  GG GGS    
Sbjct: 367 QTSSAGSSGGGGGGAGAAGGAGGAGTYHCNLQAMSLYAAGERGGHLQGAPGGAGGSAVDD 426

Query: 412 TAQSFLRPPGTVQSAALM--------------ATHQPLS-LSRTTATIAPILSVPLSGQF 456
               +  PP T  S++ +              A H P +   R T+       +  +G  
Sbjct: 427 PLPDYSLPPVTSSSSSSLSHGGGGGGGGGGQEAGHHPAAHQGRLTSWY-----LNQAGGD 481

Query: 457 LQPAASAAAAAAAA 470
           L   ASAAAAAAAA
Sbjct: 482 LGHLASAAAAAAAA 495



 Score = 30.4 bits (67), Expect = 3.7
 Identities = 21/57 (36%), Positives = 23/57 (40%), Gaps = 17/57 (29%)

Query: 85  AAGAGAGPGGDVGAPEADGCKGGVG--------------GEEGGASGGGPGAGSGSA 127
           +AG+  G GG  GA    G  GG G              GE GG   G PG   GSA
Sbjct: 370 SAGSSGGGGGGAGAA---GGAGGAGTYHCNLQAMSLYAAGERGGHLQGAPGGAGGSA 423



 Score = 29.3 bits (64), Expect = 8.2
 Identities = 22/51 (43%), Positives = 24/51 (47%), Gaps = 14/51 (27%)

Query: 266 GAAGPYGRPYGLHPAA------------AAGAYSHPAAAAAAAAAAALQYP 304
           G  G  G+  G HPAA            A G   H A+AAAAAAAA   YP
Sbjct: 450 GGGGGGGQEAGHHPAAHQGRLTSWYLNQAGGDLGHLASAAAAAAAAG--YP 498


>gi|4885237 forkhead box C2 [Homo sapiens]
          Length = 501

 Score =  187 bits (475), Expect = 2e-47
 Identities = 124/309 (40%), Positives = 164/309 (53%), Gaps = 47/309 (15%)

Query: 101 ADGCKGGVGGEEGGASGGGPGAGSGSAGGLAP------SKPKNSLVKPPYSYIALITMAI 154
           A G  GG+    G  SG      +G     AP      + PK+ LVKPPYSYIALITMAI
Sbjct: 27  AAGSYGGMASPMGVYSGHPEQYSAGMGRSYAPYHHHQPAAPKD-LVKPPYSYIALITMAI 85

Query: 155 LQSPQKKLTLSGICEFISNRFPYYREKFPAWQNSIRHNLSLNDCFVKIPREPGNPGKGNY 214
             +P+KK+TL+GI +FI +RFP+YRE    WQNSIRHNLSLN+CFVK+PR+   PGKG+Y
Sbjct: 86  QNAPEKKITLNGIYQFIMDRFPFYRENKQGWQNSIRHNLSLNECFVKVPRDDKKPGKGSY 145

Query: 215 WTLDPQSEDMFDNGSFLRRRKRFKRHQQEHLREQTALMMQSFGAYSLAAAAGAAGPYGRP 274
           WTLDP S +MF+NGSFLRRR+RFK+      +E+ A + +                    
Sbjct: 146 WTLDPDSYNMFENGSFLRRRRRFKKKDVSKEKEERAHLKEP------------------- 186

Query: 275 YGLHPAAAAGAYSHPAAAAAAAAAAALQYPYALPPVAPVLPPAVPLLPSGELGRKAAAFG 334
               PAA+ GA + P  A A   A        +   +    PA+P++   E         
Sbjct: 187 ---PPAASKGAPATPHLADAPKEAEK-----KVVIKSEAASPALPVITKVE--------- 229

Query: 335 SQLGPGLQLQLNSLGAAAAAAGTAGAAGTTASLIKSEPSARPSFSIENIIGGGPAAPGGS 394
             L P   LQ +   AA+  AG+    G+      + P+  P FS+ENI+    + PGG 
Sbjct: 230 -TLSPESALQGSPRSAASTPAGSPD--GSLPEHHAAAPNGLPGFSVENIMTLRTSPPGGE 286

Query: 395 -AVGAGVAG 402
            + GAG AG
Sbjct: 287 LSPGAGRAG 295


>gi|12751477 forkhead box L2 [Homo sapiens]
          Length = 376

 Score =  180 bits (456), Expect = 3e-45
 Identities = 122/312 (39%), Positives = 155/312 (49%), Gaps = 37/312 (11%)

Query: 82  PKEAAGAGAGPGGDVGAPEADGCKGGVGGEEGGASGGGPGAGSGSAGGLAPSKPKNSLVK 141
           P++AAGA   P       E +G                PG G G  GG AP KP +   K
Sbjct: 8   PEDAAGALLAPETGRTVKEPEG------------PPPSPGKGGGGGGGTAPEKP-DPAQK 54

Query: 142 PPYSYIALITMAILQSPQKKLTLSGICEFISNRFPYYREKFPAWQNSIRHNLSLNDCFVK 201
           PPYSY+ALI MAI +S +K+LTLSGI ++I  +FP+Y +    WQNSIRHNLSLN+CF+K
Sbjct: 55  PPYSYVALIAMAIRESAEKRLTLSGIYQYIIAKFPFYEKNKKGWQNSIRHNLSLNECFIK 114

Query: 202 IPREPGNPGKGNYWTLDPQSEDMFDNGSFLRRRKRFKRHQQEHLREQTALMMQSFGAYSL 261
           +PRE G   KGNYWTLDP  EDMF+ G++ RRR+R KR      R   A      G +  
Sbjct: 115 VPREGGGERKGNYWTLDPACEDMFEKGNY-RRRRRMKR----PFRPPPAHFQPGKGLFGA 169

Query: 262 AAAAGAAGPYGRPYGLHPAAAAGAYSHPAAAAAAAAAAALQYPYALPPVAPVLPPAVPLL 321
             AAG  G  G        A A  Y +  A      +  L   + LP     +P A   +
Sbjct: 170 GGAAGGCGVAG--------AGADGYGY-LAPPKYLQSGFLNNSWPLPQPPSPMPYASCQM 220

Query: 322 PSGELGRKAAAFGSQLGPGLQLQLNSLGAAAAAAGTAGAAGTTASLIKSEPSARPSFSIE 381
            +      AAA  +  GPG      S GAAA   G AG A +     + +  A P   + 
Sbjct: 221 AAA--AAAAAAAAAAAGPG------SPGAAAVVKGLAGPAASYGPYTRVQSMALPPGVVN 272

Query: 382 --NIIGGGPAAP 391
             N +GG PAAP
Sbjct: 273 SYNGLGGPPAAP 284



 Score = 40.8 bits (94), Expect = 0.003
 Identities = 32/84 (38%), Positives = 39/84 (46%), Gaps = 12/84 (14%)

Query: 391 PGGSAVGAG-VAGGTGGSGGGSTAQSFLRPPGTVQSAALMATHQPLSLSRTTATIAPILS 449
           PG    GAG  AGG G +G G+    +L PP  +QS  L             +   P   
Sbjct: 162 PGKGLFGAGGAAGGCGVAGAGADGYGYLAPPKYLQSGFL-----------NNSWPLPQPP 210

Query: 450 VPLSGQFLQPAASAAAAAAAAAQA 473
            P+     Q AA+AAAAAAAAA A
Sbjct: 211 SPMPYASCQMAAAAAAAAAAAAAA 234



 Score = 29.6 bits (65), Expect = 6.3
 Identities = 18/49 (36%), Positives = 19/49 (38%), Gaps = 5/49 (10%)

Query: 50  PPELRLDEADEVPPAAPHHGQPQPPHQQ-----PLTLPKEAAGAGAGPG 93
           P    L  A   PPA PHHG   PP  Q     P T    A    + PG
Sbjct: 294 PHAHHLHAAAAPPPAPPHHGAAAPPPGQLSPASPATAAPPAPAPTSAPG 342


>gi|11386197 forkhead box E3 [Homo sapiens]
          Length = 319

 Score =  174 bits (440), Expect = 2e-43
 Identities = 139/374 (37%), Positives = 170/374 (45%), Gaps = 78/374 (20%)

Query: 58  ADEVPPAAPHHGQPQPPHQQPLTLPKEAAGAGAGPGGDVGAPEADGCKGGVGGEEGGASG 117
           +D  PPAA   G P  P   P + P  +  AGA PG +                E  A+G
Sbjct: 5   SDMDPPAA-FSGFPALPAVAP-SGPPPSPLAGAEPGRE---------------PEEAAAG 47

Query: 118 GGPGAGSGSAGGLAPSKPKNSLVKPPYSYIALITMAILQSPQKKLTLSGICEFISNRFPY 177
            G  A + + G     +      KPPYSYIALI MA+  +P ++LTL+ I  FI+ RF +
Sbjct: 48  RGEAAPTPAPGPGRRRRRPLQRGKPPYSYIALIAMALAHAPGRRLTLAAIYRFITERFAF 107

Query: 178 YREKFPAWQNSIRHNLSLNDCFVKIPREPGNPGKGNYWTLDPQSEDMFDNGSFLRRRKRF 237
           YR+    WQNSIRHNL+LNDCFVK+PREPGNPGKGNYWTLDP + DMFDNGSFLRRRKRF
Sbjct: 108 YRDSPRKWQNSIRHNLTLNDCFVKVPREPGNPGKGNYWTLDPAAADMFDNGSFLRRRKRF 167

Query: 238 KRHQQEHLREQTALMMQSFGAYSLAAAAGAAGPYGRPYGLHPAAAAGAYSHPAAAAAAAA 297
           KR                                               +   A AAAA 
Sbjct: 168 KR-----------------------------------------------AELPAHAAAAP 180

Query: 298 AAALQYPYALPPVAPVLPPAVPLLPSGELG----RKAAAFGSQLGPGLQLQLNSLGA--- 350
              L +PYA  P AP   PA+ L+P    G      A  F       LQ +L  LGA   
Sbjct: 181 GPPLPFPYA--PYAPAPGPAL-LVPPPSAGPGPSPPARLFSVDSLVNLQPELAGLGAPEP 237

Query: 351 -AAAAAGTAGAAGTTASLIKSEP--SARPSFSIENIIGGGPAAPGGSAVGAGVAGGTGGS 407
              AA   A AA    +   S P  S  P   +      GP  P  +     +AG     
Sbjct: 238 PCCAAPDAAAAAFPPCAAAASPPLYSQVPDRLVLPATRPGP-GPLPAEPLLALAGPAAAL 296

Query: 408 GGGSTAQSFLRPPG 421
           G  S  +++LR PG
Sbjct: 297 GPLSPGEAYLRQPG 310


>gi|61966923 forkhead box B2 [Homo sapiens]
          Length = 432

 Score =  172 bits (437), Expect = 5e-43
 Identities = 132/363 (36%), Positives = 167/363 (46%), Gaps = 56/363 (15%)

Query: 132 PSKPKNSLVKPPYSYIALITMAILQSPQKKLTLSGICEFISNRFPYYREKFPAWQNSIRH 191
           P K   S  KPPYSYI+L  MAI  S +K L LS I +FI  RFPYYRE    WQNS+RH
Sbjct: 4   PGKSSYSDQKPPYSYISLTAMAIQHSAEKMLPLSDIYKFIMERFPYYREHTQRWQNSLRH 63

Query: 192 NLSLNDCFVKIPREPGNPGKGNYWTLDPQSEDMFDNGSFLRRRKRFKRHQQEHLREQTAL 251
           NLS NDCF+KIPR P  PGKG++W L P   DMF+NGSFLRRRKRFK  + +H       
Sbjct: 64  NLSFNDCFIKIPRRPDQPGKGSFWALHPDCGDMFENGSFLRRRKRFKVLRADHTHLHA-- 121

Query: 252 MMQSFGAYSLAAAAGAAG-----PYGRPYGLHPAAAAGAYSH------PAAAAAAAAAAA 300
                G+   A  AG  G      +  P+  H   AA  + H      P           
Sbjct: 122 -----GSTKSAPGAGPGGHLHPHHHHHPHHHHHHHAAAHHHHHHHPPQPPPPPPPPPPHM 176

Query: 301 LQYPYALPPVAPVLPPAVPLLPSGELGRKAAAFGSQLGPGLQLQLNSLGAAAAAAGTAGA 360
           + Y +  PP AP  PP +P  P  +  +++        PG ++Q  +  AAAAAA  A A
Sbjct: 177 VHYFHQQPPTAPQPPPHLPSQPPQQPPQQSQP-QQPSHPG-KMQEAAAVAAAAAAAAAAA 234

Query: 361 AGTTASLIKSEPSARPSFSIENIIGGGPAAPGGSAVGAGVAGGTGGSGGGSTAQSFLRPP 420
            G+   L +  P            G G AA    A  A  A  T G       ++ +   
Sbjct: 235 VGSVGRLSQFPP-----------YGLGSAA----AAAAAAAASTSGFKHPFAIENII--- 276

Query: 421 GTVQSAALMATHQPLSLSRTTATIAPILSVPLSGQF------------LQPAASAAAAAA 468
           G      L A   PL      A++   L  P+ GQ             +  + +AAAAAA
Sbjct: 277 GRDYKGVLQAGGLPL------ASVMHHLGYPVPGQLGNVVSSVWPHVGVMDSVAAAAAAA 330

Query: 469 AAA 471
           AAA
Sbjct: 331 AAA 333



 Score = 44.3 bits (103), Expect = 2e-04
 Identities = 55/173 (31%), Positives = 77/173 (44%), Gaps = 45/173 (26%)

Query: 258 AYSLAAAAGAAGPYGR-----PYGLHPAAAAGAYSHPAAAAAAAAAAALQYPYALP---- 308
           A + AAAA A G  GR     PYGL  AAAA       AAAAAA+ +  ++P+A+     
Sbjct: 225 AAAAAAAAAAVGSVGRLSQFPPYGLGSAAAA-------AAAAAASTSGFKHPFAIENIIG 277

Query: 309 ------------PVAPVLPPAVPLLPSGELGRKAAAFGSQLGPGLQLQLNSLGAAAAAAG 356
                       P+A V+      +P G+LG   ++    +G      ++S+ AAAAAA 
Sbjct: 278 RDYKGVLQAGGLPLASVMHHLGYPVP-GQLGNVVSSVWPHVGV-----MDSVAAAAAAAA 331

Query: 357 TA--------GAAGT-TASLIKSEPSARPSFSIENIIGGGPAAPGGSAVGAGV 400
            A        GA G    SL  S   + P+  +   I   PA P  SA+  G+
Sbjct: 332 AAGVPVGPEYGAFGVPVKSLCHSASQSLPAMPVP--IKPTPALPPVSALQPGL 382


>gi|4557595 forkhead box F2 [Homo sapiens]
          Length = 444

 Score =  169 bits (428), Expect = 5e-42
 Identities = 133/394 (33%), Positives = 170/394 (43%), Gaps = 43/394 (10%)

Query: 49  GPPELRLDEADEVPPAAPHHGQPQPPHQQPLTLPKEAAGAGAGPG--GDVGAPEADGCKG 106
           GPP   L  A    P A       PP       P  AA A A P       +  +  C  
Sbjct: 6   GPPPAPLRRACSPVPGALQAALMSPP-------PAAAAAAAAAPETTSSSSSSSSASCAS 58

Query: 107 GVGGEEGGA-------SGGGPGAGSGSAGGLAPSKPKNSLVKPPYSYIALITMAILQSPQ 159
                   +       S GG GAG+GS G    S       KPPYSYIALI MAI  SP 
Sbjct: 59  SSSSSNSASAPSAACKSAGGGGAGAGSGGAKKASSGLRRPEKPPYSYIALIVMAIQSSPS 118

Query: 160 KKLTLSGICEFISNRFPYYREKFPAWQNSIRHNLSLNDCFVKIPREPGNPGKGNYWTLDP 219
           K+LTLS I +F+  RFP++R  +  W+NS+RHNLSLN+CF+K+P+  G PGKG+YWT+DP
Sbjct: 119 KRLTLSEIYQFLQARFPFFRGAYQGWKNSVRHNLSLNECFIKLPKGLGRPGKGHYWTIDP 178

Query: 220 QSEDMFDNGSFLRRRKRFKRHQQE----HLREQTALMMQSFGAYSLAAAAGAAGPYGRPY 275
            SE MF+ GSF RR + F+R  Q     + R  + L    FGA  L        P   P 
Sbjct: 179 ASEFMFEEGSFRRRPRGFRRKCQALKPMYHRVVSGL---GFGASLLPQGFDFQAPPSAPL 235

Query: 276 GLHPAAAAGAYS-HPAAAAAAAAAAALQYP-----YALPPVAP------VLPPAVPLLPS 323
           G H     G     PA   A A A +  +P     + +P ++P      +    VP  P 
Sbjct: 236 GCHSQGGYGGLDMMPAGYDAGAGAPSHAHPHHHHHHHVPHMSPNPGSTYMASCPVPAGPG 295

Query: 324 GELGRKAAAFGSQLGPGLQLQLNSLGAAAAAAGTAGAAGTTASLIKSEPSARPSFSIENI 383
           G +G      G   GP           A A+A    +  T+ +   S P A P       
Sbjct: 296 G-VGAAGGGGGGDYGPDSSSSPVPSSPAMASAIECHSPYTSPAAHWSSPGASPYLK---- 350

Query: 384 IGGGPAAPGGSAVGAGVAGGTGGSGGGSTAQSFL 417
               P A   S+  A  AG        S  QS+L
Sbjct: 351 ---QPPALTPSSNPAASAGLHSSMSSYSLEQSYL 381



 Score = 42.4 bits (98), Expect = 0.001
 Identities = 38/106 (35%), Positives = 44/106 (41%), Gaps = 14/106 (13%)

Query: 315 PPAVPLLPSGELGRKAAAFGSQLGPGLQLQLNSLGAAAAAAGTAGAAGTTASLIKSEPSA 374
           PP  PL       R+A    S +   LQ  L S   AAAAA  A    T++S   S  S 
Sbjct: 7   PPPAPL-------RRAC---SPVPGALQAALMSPPPAAAAAAAAAPETTSSSSSSSSASC 56

Query: 375 RPSFSIENIIGGGPAAPGGSAVGAGVAGGTGGSGGGSTAQSFLRPP 420
             S S  N      +AP  +   AG  G   GSGG   A S LR P
Sbjct: 57  ASSSSSSN----SASAPSAACKSAGGGGAGAGSGGAKKASSGLRRP 98


>gi|22779860 forkhead box L1 [Homo sapiens]
          Length = 345

 Score =  169 bits (428), Expect = 5e-42
 Identities = 119/307 (38%), Positives = 152/307 (49%), Gaps = 47/307 (15%)

Query: 127 AGGLAPSKPKNSLVKPPYSYIALITMAILQSPQKKLTLSGICEFISNRFPYYREKFPAWQ 186
           A  LA S    +  KPPYSYIALI MAI  +P++++TL+GI +FI +RFP+Y +    WQ
Sbjct: 35  AAALAASGRAETPQKPPYSYIALIAMAIQDAPEQRVTLNGIYQFIMDRFPFYHDNRQGWQ 94

Query: 187 NSIRHNLSLNDCFVKIPREPGNPGKGNYWTLDPQSEDMFDNGSFLRRRKRFKRHQQEHLR 246
           NSIRHNLSLNDCFVK+PRE G PGKG+YWTLDP+  DMF+NG++ RR+++ K        
Sbjct: 95  NSIRHNLSLNDCFVKVPREKGRPGKGSYWTLDPRCLDMFENGNYRRRKRKPKP------- 147

Query: 247 EQTALMMQSFGAYSLAAAAGAAGPYGRPYGLHPAAAAGAYSHPAAAAAAAAAAALQYPYA 306
                     G  +  A    A  + R     P A +GA     A +   AA A   P  
Sbjct: 148 ----------GPGAPEAKRPRAETHQRSAEAQPEAGSGAGGSGPAISRLQAAPAGPSPLL 197

Query: 307 LPPVAPVLPPAVPLLPSGELGRKAAAFGSQLGPGLQLQLNSLGAAAAAAGTAGAAG---- 362
             P     PPA    P      + A   +Q            GAAA A G A   G    
Sbjct: 198 DGP----SPPAPLHWPGTASPNEDAGDAAQ------------GAAAVAVGQAARTGDGPG 241

Query: 363 -----TTASLIKSEPSARPSFSIENIIGG--GPAAPGGSAVGAGVAGGTGGSGGGS--TA 413
                 + S  KS   ++ SFSI++I+ G  G   P G  +  G   G GG  G S   A
Sbjct: 242 SPLRPASRSSPKSSDKSK-SFSIDSILAGKQGQKPPSGDELLGGAKPGPGGRLGASLLAA 300

Query: 414 QSFLRPP 420
            S LRPP
Sbjct: 301 SSSLRPP 307


>gi|24497504 forkhead box A2 isoform 2 [Homo sapiens]
          Length = 457

 Score =  165 bits (417), Expect = 1e-40
 Identities = 112/290 (38%), Positives = 143/290 (49%), Gaps = 44/290 (15%)

Query: 87  GAGAGPGGDVGAPEADGCKGGVGGEEG--GASGGGP----------GAGSGSAGGLAPSK 134
           GAG  P     +P A G   G+GG  G  G +G GP          G  +G+ GGLAP  
Sbjct: 70  GAGMSPSLAGMSPGA-GAMAGMGGSAGAAGVAGMGPHLSPSLSPLGGQAAGAMGGLAPYA 128

Query: 135 PKNSL------------------------VKPPYSYIALITMAILQSPQKKLTLSGICEF 170
             NS+                         KPPYSYI+LITMAI QSP K LTLS I ++
Sbjct: 129 NMNSMSPMYGQAGLSRARDPKTYRRSYTHAKPPYSYISLITMAIQQSPNKMLTLSEIYQW 188

Query: 171 ISNRFPYYREKFPAWQNSIRHNLSLNDCFVKIPREPGNPGKGNYWTLDPQSEDMFDNGSF 230
           I + FP+YR+    WQNSIRH+LS NDCF+K+PR P  PGKG++WTL P S +MF+NG +
Sbjct: 189 IMDLFPFYRQNQQRWQNSIRHSLSFNDCFLKVPRSPDKPGKGSFWTLHPDSGNMFENGCY 248

Query: 231 LRRRKRFKRHQQEHLREQTALMMQSFGAYSLAAAAGAAGPYGRPYGLHPAAAAGAYS-HP 289
           LRR+KRFK  +Q  L+E  A      G  + A A  +    G   G      AG  S H 
Sbjct: 249 LRRQKRFKCEKQLALKE--AAGAAGSGKKAAAGAQASQAQLGEAAGPASETPAGTESPHS 306

Query: 290 AAAAAAAAAAALQYPYALPPVAPVLPPAVPLLPSGELGRKAAAFGSQLGP 339
           +A+                P A + PP     P+   G++  A    LGP
Sbjct: 307 SASPCQEHKRGGLGELKGTPAAALSPPE----PAPSPGQQQQAAAHLLGP 352


>gi|194394143 forkhead box A2 isoform 1 [Homo sapiens]
          Length = 463

 Score =  165 bits (417), Expect = 1e-40
 Identities = 112/290 (38%), Positives = 143/290 (49%), Gaps = 44/290 (15%)

Query: 87  GAGAGPGGDVGAPEADGCKGGVGGEEG--GASGGGP----------GAGSGSAGGLAPSK 134
           GAG  P     +P A G   G+GG  G  G +G GP          G  +G+ GGLAP  
Sbjct: 76  GAGMSPSLAGMSPGA-GAMAGMGGSAGAAGVAGMGPHLSPSLSPLGGQAAGAMGGLAPYA 134

Query: 135 PKNSL------------------------VKPPYSYIALITMAILQSPQKKLTLSGICEF 170
             NS+                         KPPYSYI+LITMAI QSP K LTLS I ++
Sbjct: 135 NMNSMSPMYGQAGLSRARDPKTYRRSYTHAKPPYSYISLITMAIQQSPNKMLTLSEIYQW 194

Query: 171 ISNRFPYYREKFPAWQNSIRHNLSLNDCFVKIPREPGNPGKGNYWTLDPQSEDMFDNGSF 230
           I + FP+YR+    WQNSIRH+LS NDCF+K+PR P  PGKG++WTL P S +MF+NG +
Sbjct: 195 IMDLFPFYRQNQQRWQNSIRHSLSFNDCFLKVPRSPDKPGKGSFWTLHPDSGNMFENGCY 254

Query: 231 LRRRKRFKRHQQEHLREQTALMMQSFGAYSLAAAAGAAGPYGRPYGLHPAAAAGAYS-HP 289
           LRR+KRFK  +Q  L+E  A      G  + A A  +    G   G      AG  S H 
Sbjct: 255 LRRQKRFKCEKQLALKE--AAGAAGSGKKAAAGAQASQAQLGEAAGPASETPAGTESPHS 312

Query: 290 AAAAAAAAAAALQYPYALPPVAPVLPPAVPLLPSGELGRKAAAFGSQLGP 339
           +A+                P A + PP     P+   G++  A    LGP
Sbjct: 313 SASPCQEHKRGGLGELKGTPAAALSPPE----PAPSPGQQQQAAAHLLGP 358


>gi|32307177 forkhead box G1 [Homo sapiens]
          Length = 489

 Score =  160 bits (406), Expect = 2e-39
 Identities = 106/275 (38%), Positives = 128/275 (46%), Gaps = 29/275 (10%)

Query: 46  SPAGPPELRLDEADEVPPAAPHHGQ------------------PQPPHQQPLTLPKEAAG 87
           +P  PP  +  +    PP AP   Q                  P PP   P      A  
Sbjct: 62  APQPPPPPQQQQPPPPPPPAPQPPQTRGAPAADDDKGPQQLLLPPPPPPPPAAALDGAKA 121

Query: 88  AGAGPGGDVGAPEADGCKGGVGGEEGGASGGGP---GAGSGSA---GGLAPSKPKNSLVK 141
            G G  G+ G    +    G   +E GA  GG    GAG G     GG    K      K
Sbjct: 122 DGLGGKGEPGGGPGELAPVGPDEKEKGAGAGGEEKKGAGEGGKDGEGGKEGEKKNGKYEK 181

Query: 142 PPYSYIALITMAILQSPQKKLTLSGICEFISNRFPYYREKFPAWQNSIRHNLSLNDCFVK 201
           PP+SY ALI MAI QSP+K+LTL+GI EFI   FPYYRE    WQNSIRHNLSLN CFVK
Sbjct: 182 PPFSYNALIMMAIRQSPEKRLTLNGIYEFIMKNFPYYRENKQGWQNSIRHNLSLNKCFVK 241

Query: 202 IPREPGNPGKGNYWTLDPQSEDMFDNGSF--LRRRKRFKRHQQEHLREQTALMMQSFGAY 259
           +PR   +PGKGNYW LDP S+D+F  G+   LRRR    R +   L  +    + S G  
Sbjct: 242 VPRHYDDPGKGNYWMLDPSSDDVFIGGTTGKLRRRSTTSRAK---LAFKRGARLTSTGLT 298

Query: 260 SLAAAAGAAGPYGRPYGLHPAAAAGAYSHPAAAAA 294
            +  A     P      LH   A+   S+    +A
Sbjct: 299 FMDRAGSLYWPMSPFLSLHHPRASSTLSYNGTTSA 333



 Score = 30.8 bits (68), Expect = 2.8
 Identities = 36/131 (27%), Positives = 41/131 (31%), Gaps = 7/131 (5%)

Query: 308 PPVAPVLPPAVPLLPSGELGRKAAAFGSQLGPGLQLQLNSLGAAAAAAGTAGAAGTTASL 367
           PP     PP  P  P     R A A     GP  QL L        AA   GA       
Sbjct: 68  PPQQQQPPPPPPPAPQPPQTRGAPAADDDKGPQ-QLLLPPPPPPPPAAALDGAKADGLGG 126

Query: 368 IKSEPSARPSFSI-----ENIIGGGPAAPGGSAVGAGVAGGTGGSGGGSTAQSFLRPPGT 422
            K EP   P         E   G G         G G   G GG  G      + +PP +
Sbjct: 127 -KGEPGGGPGELAPVGPDEKEKGAGAGGEEKKGAGEGGKDGEGGKEGEKKNGKYEKPPFS 185

Query: 423 VQSAALMATHQ 433
             +  +MA  Q
Sbjct: 186 YNALIMMAIRQ 196


>gi|105554437 forkhead box B1 [Homo sapiens]
          Length = 325

 Score =  160 bits (406), Expect = 2e-39
 Identities = 102/240 (42%), Positives = 123/240 (51%), Gaps = 16/240 (6%)

Query: 132 PSKPKNSLVKPPYSYIALITMAILQSPQKKLTLSGICEFISNRFPYYREKFPAWQNSIRH 191
           P +   S  KPPYSYI+L  MAI  SP+K L LS I +FI +RFPYYRE    WQNS+RH
Sbjct: 4   PGRNTYSDQKPPYSYISLTAMAIQSSPEKMLPLSEIYKFIMDRFPYYRENTQRWQNSLRH 63

Query: 192 NLSLNDCFVKIPREPGNPGKGNYWTLDPQSEDMFDNGSFLRRRKRFKRHQQEHLREQTA- 250
           NLS NDCF+KIPR P  PGKG++W L P   DMF+NGSFLRRRKRFK  + +HL      
Sbjct: 64  NLSFNDCFIKIPRRPDQPGKGSFWALHPSCGDMFENGSFLRRRKRFKVLKSDHLAPSKPA 123

Query: 251 -----LMMQSFGAYSLAAAAGAAGPY--GRPYGLHPAAAAGAYSHP-AAAAAAAAAAALQ 302
                L  Q+    S  AA+G   P      Y L   A    + HP A     A    + 
Sbjct: 124 DAAQYLQQQAKLRLSALAASGTHLPQMPAAAYNLGGVAQPSGFKHPFAIENIIAREYKMP 183

Query: 303 YPYALPPVAPVLPPAVPLLPSGELGRKAAAFGSQLGPGLQLQLNSLGAAAAAAGTAGAAG 362
              A   + PV P A P      L  +    GS LG G      S G   +A   + A+G
Sbjct: 184 GGLAFSAMQPV-PAAYP------LPNQLTTMGSSLGTGWPHVYGSAGMIDSATPISMASG 236


>gi|110735445 forkhead box F1 [Homo sapiens]
          Length = 379

 Score =  159 bits (403), Expect = 4e-39
 Identities = 116/307 (37%), Positives = 149/307 (48%), Gaps = 53/307 (17%)

Query: 98  APEADGCKGGVGGEEGGASGGGPGAGSGSAGGLAPSKPKNSLV------KPPYSYIALIT 151
           APE      G GG  GG  GGG      S+G   PSK K +        KPPYSYIALI 
Sbjct: 4   APEKQQPPHGGGG--GGGGGGGAAMDPASSG---PSKAKKTNAGIRRPEKPPYSYIALIV 58

Query: 152 MAILQSPQKKLTLSGICEFISNRFPYYREKFPAWQNSIRHNLSLNDCFVKIPREPGNPGK 211
           MAI  SP K+LTLS I +F+ +RFP++R  +  W+NS+RHNLSLN+CF+K+P+  G PGK
Sbjct: 59  MAIQSSPTKRLTLSEIYQFLQSRFPFFRGSYQGWKNSVRHNLSLNECFIKLPKGLGRPGK 118

Query: 212 GNYWTLDPQSEDMFDNGSFLRRRKRFKRHQQ--------------EHLREQTALMMQSFG 257
           G+YWT+DP SE MF+ GSF RR + F+R  Q               HL +       + G
Sbjct: 119 GHYWTIDPASEFMFEEGSFRRRPRGFRRKCQALKPMYSMMNGLGFNHLPDTYGFQGSAGG 178

Query: 258 ----AYSLAAAAGAAGPYGRPYGLHPAAAAGAYSHP--------AAAAAAAAAAALQYPY 305
                 SLA   G     G   G     A  ++S P        +       AAA +YP+
Sbjct: 179 LSCPPNSLALEGGLGMMNGHLPGNVDGMALPSHSVPHLPSNGGHSYMGGCGGAAAGEYPH 238

Query: 306 ALPPVAPVLPPAVPLLPSGELGRKAAAFGSQLGPGLQLQLNSLGAAAAAAGTAGAAGTTA 365
               V     PA PLLP+G         G  + P     + S  AAA     + A  + A
Sbjct: 239 HDSSV-----PASPLLPTGA--------GGVMEPH---AVYSGSAAAWPPSASAALNSGA 282

Query: 366 SLIKSEP 372
           S IK +P
Sbjct: 283 SYIKQQP 289


>gi|195947376 forkhead box I2 [Homo sapiens]
          Length = 318

 Score =  159 bits (402), Expect = 5e-39
 Identities = 113/312 (36%), Positives = 148/312 (47%), Gaps = 44/312 (14%)

Query: 59  DEVPPAAPHHGQPQPPHQQPLTLPKEAAGAGAGPGGDVGAP----EADGCKGGVGGEEGG 114
           D++ P++   GQ Q     P   P +    G GP   V AP    ++     G       
Sbjct: 6   DDLGPSSAPPGQAQATAHPPGYEPGDLGAVGGGPLLWVNAPALSPKSYASGPGPAPPYAA 65

Query: 115 ASGGGPGAGSGSAGGLAPS----------KPKNSLVKPPYSYIALITMAILQSPQKKLTL 164
            S G PG   G+ GGLA +          +    LV+PPYSY ALI MAI  +P +KLTL
Sbjct: 66  PSYGAPGPLLGAPGGLAGADLAWLSLSGQQELLRLVRPPYSYSALIAMAIQSAPLRKLTL 125

Query: 165 SGICEFISNRFPYYREKFPAWQNSIRHNLSLNDCFVKIPREPGNPGKGNYWTLDPQSEDM 224
           S I ++++  FP+Y+     WQNSIRHNLSLNDCF K+PR+  +PGKGNYWTLDP  E M
Sbjct: 126 SQIYQYVAGNFPFYKRSKAGWQNSIRHNLSLNDCFKKVPRDEDDPGKGNYWTLDPNCEKM 185

Query: 225 FDNGSFLRRRKRFKRHQQEHLR---------EQTALMMQSFGAYSLAAAAGAAGPYGRPY 275
           FDNG+F R+RKR +      +R         E  AL   S     L A+   + P     
Sbjct: 186 FDNGNFRRKRKR-RAEASAAVRSGARSVGGAEAPALEPPSAACLDLQASPSPSAP----- 239

Query: 276 GLHPAAAAGAYSHPAAAAAAAAAAALQYPYAL----------PPVAPVLPPAVPLLPSGE 325
                 AA  +S  A+A +A A     +P  L          P VA   P  +   P   
Sbjct: 240 -----EAATCFSGFASAMSALAGGLGTFPGGLAGDFSFGRRPPTVATHAPQTLNPSPGFA 294

Query: 326 LGRKAAAFGSQL 337
            G + AA G +L
Sbjct: 295 PGHQTAAAGFRL 306


>gi|24497506 forkhead box A3 [Homo sapiens]
          Length = 350

 Score =  154 bits (390), Expect = 1e-37
 Identities = 125/342 (36%), Positives = 154/342 (45%), Gaps = 61/342 (17%)

Query: 78  PLTLPKEAAGAGAGP--GGDVGAPEADGCKGGVGGEEGGASGGGPGAGSGSAG-GLAPSK 134
           PL+ P    G  A P   G + AP A     G      G SGG   +G G+ G GL   K
Sbjct: 45  PLSSPYPPGGLPASPLPSGPL-APPAPAAPLGPTFPGLGVSGGSSSSGYGAPGPGLVHGK 103

Query: 135 --PKN-----SLVKPPYSYIALITMAILQSPQKKLTLSGICEFISNRFPYYREKFPAWQN 187
             PK      +  KPPYSYI+LITMAI Q+P K LTLS I ++I + FPYYRE    WQN
Sbjct: 104 EMPKGYRRPLAHAKPPYSYISLITMAIQQAPGKMLTLSEIYQWIMDLFPYYRENQQRWQN 163

Query: 188 SIRHNLSLNDCFVKIPREPGNPGKGNYWTLDPQSEDMFDNGSFLRRRKRFKRHQQEHLRE 247
           SIRH+LS NDCFVK+ R P  PGKG+YW L P S +MF+NG +LRR+KRFK  ++     
Sbjct: 164 SIRHSLSFNDCFVKVARSPDKPGKGSYWALHPSSGNMFENGCYLRRQKRFKLEEK----- 218

Query: 248 QTALMMQSFGAYSLAAAAGAAGPYGRPYGLHPAAAAGAYSHPAAAAAAAAAAALQYPYAL 307
                             G +G          AA        +AA+    AA +  P   
Sbjct: 219 ---------------VKKGGSG----------AATTTRNGTGSAASTTTPAATVTSPPQP 253

Query: 308 PPVAPVLPPAVPLLPSGELGRKAAAFGSQLGPGLQLQLNSLGAAAAAAGTAGAAGTTASL 367
           PP AP  P A      G L   + A  +    GL+L               G     A  
Sbjct: 254 PPPAPE-PEAQGGEDVGALDCGSPASSTPYFTGLEL--------------PGELKLDAPY 298

Query: 368 IKSEPSARPSFSIENIIGGGPAAPGGSAVGAGVAGGTGGSGG 409
             + P     FSI N++     AP    VG G  G  GG  G
Sbjct: 299 NFNHP-----FSINNLMSEQTPAPPKLDVGFGGYGAEGGEPG 335


>gi|145309320 forkhead box Q1 [Homo sapiens]
          Length = 403

 Score =  153 bits (387), Expect = 3e-37
 Identities = 132/393 (33%), Positives = 160/393 (40%), Gaps = 63/393 (16%)

Query: 5   GGGSASDMSGQTVLTAEDVDIDVVGEGDDGLEEKDSDAGCDSPAGPPELRLDEADEVPPA 64
           G    SD+ G       D    +   GDD L   D D   +SPA     R  + D     
Sbjct: 13  GDKQGSDLEGAG---GSDAPSPLSAAGDDSLGS-DGDCAANSPAAGGGARDTQGDG---- 64

Query: 65  APHHGQPQPPHQQPLTLPKEAAGAGAGPGGDVGAPEADGCKGGVGGEEGGASGGGPGAGS 124
                                  AG GPG +   P A        G E GA+G  PGAG 
Sbjct: 65  --------------------EQSAGGGPGAEEAIPAAAAAAVVAEGAEAGAAG--PGAGG 102

Query: 125 GSAGGLAPSKPKNSLVKPPYSYIALITMAILQSPQKKLTLSGICEFISNRFPYYREKFPA 184
             +G  A SKP     KPPYSYIALI MAI  S   +LTL+ I E++  +FP++R  +  
Sbjct: 103 AGSGEGARSKPYTRRPKPPYSYIALIAMAIRDSAGGRLTLAEINEYLMGKFPFFRGSYTG 162

Query: 185 WQNSIRHNLSLNDCFVKIPREPGNP-GKGNYWTLDPQSEDMFDNGSFLRRRKRFKRH--- 240
           W+NS+RHNLSLNDCFVK+ R+P  P GK NYW L+P SE  F +G F RRRKR       
Sbjct: 163 WRNSVRHNLSLNDCFVKVLRDPSRPWGKDNYWMLNPNSEYTFADGVFRRRRKRLSHRAPV 222

Query: 241 QQEHLREQTALMMQSFGAYSLAAAAGAAGPYGRPYGLHP--AAAAGAYSHPAAAAA---- 294
               LR + A       A    A A  A P  R        A+ AG +S   A  +    
Sbjct: 223 PAPGLRPEEA---PGLPAAPPPAPAAPASPRMRSPARQEERASPAGKFSSSFAIDSILRK 279

Query: 295 ---------AAAAAALQYPYALPPVAPVLPPAVPLLP-----------SGELGRKAAAFG 334
                     A    LQ+  A  P  P  P  +P  P           +GE  R  A   
Sbjct: 280 PFRSRRLRDTAPGTTLQWGAAPCPPLPAFPALLPAAPCRALLPLCAYGAGEPARLGAREA 339

Query: 335 SQLGPGLQLQLNSLGAAAAAAGTAGAAGTTASL 367
                   L L  L AAA A    G A   A L
Sbjct: 340 EVPPTAPPLLLAPLPAAAPAKPLRGPAAGGAHL 372


>gi|208431824 forkhead box I3 [Homo sapiens]
          Length = 420

 Score =  153 bits (387), Expect = 3e-37
 Identities = 85/194 (43%), Positives = 105/194 (54%), Gaps = 30/194 (15%)

Query: 43  GCDSPAGPPELRLDEADEVPPAAPHHGQPQPPHQQPLTLPKEAAGAGAGPGGDVGAPEAD 102
           G   P  PP        + PPAA   G  Q P  QP      +  A AGP          
Sbjct: 77  GAPPPPPPPGAAAGPFLQPPPAAGTFGCSQRPFAQPAPAAPASPAAPAGP---------- 126

Query: 103 GCKGGVGGEEGGASGGGPGAGSGSAGGLAPSKPKNSLVKPPYSYIALITMAILQSPQKKL 162
                  GE G  S             +A  +    +V+PPYSY ALI MAI  +P++KL
Sbjct: 127 -------GELGWLS-------------MASREDLMKMVRPPYSYSALIAMAIQSAPERKL 166

Query: 163 TLSGICEFISNRFPYYREKFPAWQNSIRHNLSLNDCFVKIPREPGNPGKGNYWTLDPQSE 222
           TLS I +F+++ FP+Y+     WQNSIRHNLSLNDCF K+PR+  +PGKGNYWTLDP  E
Sbjct: 167 TLSHIYQFVADSFPFYQRSKAGWQNSIRHNLSLNDCFKKVPRDEDDPGKGNYWTLDPNCE 226

Query: 223 DMFDNGSFLRRRKR 236
            MFDNG+F R+RKR
Sbjct: 227 KMFDNGNFRRKRKR 240



 Score = 37.7 bits (86), Expect = 0.023
 Identities = 30/71 (42%), Positives = 33/71 (46%), Gaps = 3/71 (4%)

Query: 257 GAYSLAAAAGAAGPYGRPYGLHPAAAAGAYSHPAAAAAAAAAAALQYPYALPPVAPVLPP 316
           G  S AAAA AA     P    P AAAG +  P  AA     +  Q P+A P  A    P
Sbjct: 63  GPPSAAAAAAAAYLGAPPPPPPPGAAAGPFLQPPPAAGTFGCS--QRPFAQPAPAAPASP 120

Query: 317 AVPLLPSGELG 327
           A P  P GELG
Sbjct: 121 AAPAGP-GELG 130



 Score = 36.6 bits (83), Expect = 0.052
 Identities = 48/131 (36%), Positives = 51/131 (38%), Gaps = 36/131 (27%)

Query: 255 SFGAYS---------LAAAAGAAGPYGRPYGLH-----PAAAAGAY---------SHPAA 291
           +FG YS          AAA GA      PYGL      PAAAA  Y           P+A
Sbjct: 8   NFGVYSQPGLPPPAATAAAPGAPPAARAPYGLADYAAPPAAAANPYLWLNGPGVGGPPSA 67

Query: 292 AAAAAAAAALQYPYALPPVAPVLPPAVPLLPSGELGRKAAAFGSQLGPGLQLQLNSLGAA 351
           AAAAAAA    Y  A PP  P    A P L   +    A  FG    P  Q       A 
Sbjct: 68  AAAAAAA----YLGAPPPPPPPGAAAGPFL---QPPPAAGTFGCSQRPFAQ------PAP 114

Query: 352 AAAAGTAGAAG 362
           AA A  A  AG
Sbjct: 115 AAPASPAAPAG 125


>gi|28973785 forkhead box S1 [Homo sapiens]
          Length = 330

 Score =  152 bits (383), Expect = 8e-37
 Identities = 69/108 (63%), Positives = 80/108 (74%)

Query: 132 PSKPKNSLVKPPYSYIALITMAILQSPQKKLTLSGICEFISNRFPYYREKFPAWQNSIRH 191
           P  P     KPPYSYIALI MAI  SP ++ TLSGI  +I  RF +YR   P WQNSIRH
Sbjct: 9   PGAPTTEPTKPPYSYIALIAMAIQSSPGQRATLSGIYRYIMGRFAFYRHNRPGWQNSIRH 68

Query: 192 NLSLNDCFVKIPREPGNPGKGNYWTLDPQSEDMFDNGSFLRRRKRFKR 239
           NLSLN+CFVK+PR+   PGKG+YWTLDP   DMF++GSFLRRR+RF R
Sbjct: 69  NLSLNECFVKVPRDDRKPGKGSYWTLDPDCHDMFEHGSFLRRRRRFTR 116


>gi|24497501 forkhead box A1 [Homo sapiens]
          Length = 472

 Score =  148 bits (373), Expect = 1e-35
 Identities = 98/242 (40%), Positives = 126/242 (52%), Gaps = 25/242 (10%)

Query: 117 GGGPGAGSGSAGGLAPSKPKNSLVKPPYSYIALITMAILQSPQKKLTLSGICEFISNRFP 176
           G     G G A     S P     KPPYSYI+LITMAI Q+P K LTLS I ++I + FP
Sbjct: 149 GRSRAGGGGDAKTFKRSYPH---AKPPYSYISLITMAIQQAPSKMLTLSEIYQWIMDLFP 205

Query: 177 YYREKFPAWQNSIRHNLSLNDCFVKIPREPGNPGKGNYWTLDPQSEDMFDNGSFLRRRKR 236
           YYR+    WQNSIRH+LS NDCFVK+ R P  PGKG+YWTL P S +MF+NG +LRR+KR
Sbjct: 206 YYRQNQQRWQNSIRHSLSFNDCFVKVARSPDKPGKGSYWTLHPDSGNMFENGCYLRRQKR 265

Query: 237 FKRHQQEHLREQTALMMQSFGA----YSLAAAAGAAGP----------YGRPYGLHPAAA 282
           FK  +Q              GA     S    +GA+ P          +G+   L  A A
Sbjct: 266 FKCEKQPGAGGGGGSGSGGSGAKGGPESRKDPSGASNPSADSPLHRGVHGKTGQLEGAPA 325

Query: 283 AGAYSHP-----AAAAAAAAAAALQYPYA--LPPVAPVLPPAVPLLPSGELGRKAAAFGS 335
            G  + P     + A A   A+ L+ P +   PP++   P A+  +P+       A   S
Sbjct: 326 PGPAASPQTLDHSGATATGGASELKTPASSTAPPISSG-PGALASVPASHPAHGLAPHES 384

Query: 336 QL 337
           QL
Sbjct: 385 QL 386



 Score = 29.3 bits (64), Expect = 8.2
 Identities = 38/147 (25%), Positives = 52/147 (35%), Gaps = 13/147 (8%)

Query: 299 AALQYPYALPPVAPVLPP-AVPLLPSGELGRKAAAFGSQLGPGLQLQLNSLGAAAAAAGT 357
           A+    YA P +   L P AV  +P G  G    A  S    G+     +L  +   A  
Sbjct: 62  ASFNMSYANPGLGAGLSPGAVAGMPGGSAG----AMNSMTAAGVTAMGTALSPSGMGAMG 117

Query: 358 AGAAGTTASLIKSEPSARPSFSIENIIGGGPAAPGGSAVGAGVAGGTGGSGGGSTAQSFL 417
           A  A +   L     +  P  S        P A   S +G   AGG G +     +    
Sbjct: 118 AQQAASMNGLGPYAAAMNPCMS--------PMAYAPSNLGRSRAGGGGDAKTFKRSYPHA 169

Query: 418 RPPGTVQSAALMATHQPLSLSRTTATI 444
           +PP +  S   MA  Q  S   T + I
Sbjct: 170 KPPYSYISLITMAIQQAPSKMLTLSEI 196


>gi|21618327 forkhead box I1 isoform a [Homo sapiens]
          Length = 378

 Score =  143 bits (361), Expect = 3e-34
 Identities = 69/118 (58%), Positives = 86/118 (72%), Gaps = 2/118 (1%)

Query: 121 GAGSGSAGGLA-PSKPK-NSLVKPPYSYIALITMAILQSPQKKLTLSGICEFISNRFPYY 178
           G G    G L  PS+ +   LV+PPYSY ALI MAI  +P K+LTLS I +++++ FP+Y
Sbjct: 101 GLGGSDLGWLPIPSQEELMKLVRPPYSYSALIAMAIHGAPDKRLTLSQIYQYVADNFPFY 160

Query: 179 REKFPAWQNSIRHNLSLNDCFVKIPREPGNPGKGNYWTLDPQSEDMFDNGSFLRRRKR 236
            +    WQNSIRHNLSLNDCF K+PR+  +PGKGNYWTLDP  E MFDNG+F R+RKR
Sbjct: 161 NKSKAGWQNSIRHNLSLNDCFKKVPRDEDDPGKGNYWTLDPNCEKMFDNGNFRRKRKR 218


  Database: hs.faa
    Posted date:  Aug 4, 2009  4:42 PM
  Number of letters in database: 18,247,518
  Number of sequences in database:  37,866
  
Lambda     K      H
   0.311    0.131    0.389 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 23,826,728
Number of Sequences: 37866
Number of extensions: 1528127
Number of successful extensions: 30205
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 487
Number of HSP's successfully gapped in prelim test: 871
Number of HSP's that attempted gapping in prelim test: 12781
Number of HSP's gapped (non-prelim): 10824
length of query: 478
length of database: 18,247,518
effective HSP length: 106
effective length of query: 372
effective length of database: 14,233,722
effective search space: 5294944584
effective search space used: 5294944584
T: 11
A: 40
X1: 16 ( 7.2 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (21.8 bits)
S2: 64 (29.3 bits)

Search results were obtained with NCBI BLAST and RefSeq entries.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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