Search of human proteins with 66529093

Search of human proteins with 66529093

BLASTP 2.2.11 [Jun-05-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= gi|66529093 ATP-binding cassette, sub-family C, member 5
isoform 2 [Homo sapiens]
         (208 letters)

Database: hs.faa 
           37,866 sequences; 18,247,518 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gi|66529093 ATP-binding cassette, sub-family C, member 5 isoform...   426   e-120
gi|66529005 ATP-binding cassette, sub-family C, member 5 isoform...   404   e-113
gi|89111135 ATP-binding cassette protein C12 [Homo sapiens]            84   9e-17
gi|21729876 ATP-binding cassette, sub-family C, member 11 isofor...    77   1e-14
gi|21729873 ATP-binding cassette, sub-family C, member 11 isofor...    77   1e-14
gi|15149474 ATP-binding cassette, sub-family C, member 11 isofor...    77   1e-14
gi|157502203 ATP-binding cassette, sub-family C, member 4 isofor...    39   0.002
gi|157502201 ATP-binding cassette, sub-family C, member 4 isofor...    39   0.002
gi|90421313 cystic fibrosis transmembrane conductance regulator ...    37   0.012
gi|221316556 ATP-binding cassette, sub-family C, member 3 isofor...    35   0.059
gi|9955970 ATP-binding cassette, sub-family C, member 3 isoform ...    35   0.059
gi|190343023 ATP-binding cassette, sub-family C, member 6 isofor...    34   0.10 
gi|239756495 PREDICTED: hypothetical protein [Homo sapiens]            34   0.10 
gi|134142345 ATP-binding cassette, sub-family C, member 1 isofor...    33   0.22 
gi|134142342 ATP-binding cassette, sub-family C, member 1 isofor...    33   0.22 
gi|134142340 ATP-binding cassette, sub-family C, member 1 isofor...    33   0.22 
gi|134142335 ATP-binding cassette, sub-family C, member 1 isofor...    33   0.22 
gi|134142337 ATP-binding cassette, sub-family C, member 1 isofor...    33   0.22 
gi|4557481 ATP-binding cassette, sub-family C (CFTR/MRP), member...    32   0.38 
gi|52630326 chromodomain helicase DNA binding protein 3 isoform ...    30   1.9  
gi|158420731 chromodomain helicase DNA binding protein 3 isoform...    30   1.9  
gi|118582255 ATP-binding cassette, sub-family C, member 8 [Homo ...    29   2.5  
gi|242247001 clathrin, heavy polypeptide-like 1 isoform 2 [Homo ...    29   3.2  
gi|242246985 clathrin, heavy polypeptide-like 1 isoform 1 [Homo ...    29   3.2  
gi|110832839 ATP-binding cassette, sub-family C, member 9 isofor...    28   5.5  
gi|110832835 ATP-binding cassette, sub-family C, member 9 isofor...    28   5.5  
gi|110832837 ATP-binding cassette, sub-family C, member 9 isofor...    28   5.5  
gi|62912474 leucine-rich repeat-containing G protein-coupled rec...    28   5.5  
gi|239750869 PREDICTED: hypothetical protein XP_002347589 [Homo ...    28   7.2  
gi|239745469 PREDICTED: nuclear pore complex interacting protein...    28   7.2  

>gi|66529093 ATP-binding cassette, sub-family C, member 5 isoform 2
           [Homo sapiens]
          Length = 208

 Score =  426 bits (1094), Expect = e-120
 Identities = 208/208 (100%), Positives = 208/208 (100%)

Query: 1   MKDIDIGKEYIIPSPGYRSVRERTSTSGTHRDREDSKFRRTRPLECQDALETAARAEGLS 60
           MKDIDIGKEYIIPSPGYRSVRERTSTSGTHRDREDSKFRRTRPLECQDALETAARAEGLS
Sbjct: 1   MKDIDIGKEYIIPSPGYRSVRERTSTSGTHRDREDSKFRRTRPLECQDALETAARAEGLS 60

Query: 61  LDASMHSQLRILDEEHPKGKYHHGLSALKPIRTTSKHQHPVDNAGLFSCMTFSWLSSLAR 120
           LDASMHSQLRILDEEHPKGKYHHGLSALKPIRTTSKHQHPVDNAGLFSCMTFSWLSSLAR
Sbjct: 61  LDASMHSQLRILDEEHPKGKYHHGLSALKPIRTTSKHQHPVDNAGLFSCMTFSWLSSLAR 120

Query: 121 VAHKKGELSMEDVWSLSKHESSDVNCRRLERLWQEELNEVGPDAASLRRVVWIFCRTRLI 180
           VAHKKGELSMEDVWSLSKHESSDVNCRRLERLWQEELNEVGPDAASLRRVVWIFCRTRLI
Sbjct: 121 VAHKKGELSMEDVWSLSKHESSDVNCRRLERLWQEELNEVGPDAASLRRVVWIFCRTRLI 180

Query: 181 LSIVCLMITQLAGFSGPNFQDGCILRSE 208
           LSIVCLMITQLAGFSGPNFQDGCILRSE
Sbjct: 181 LSIVCLMITQLAGFSGPNFQDGCILRSE 208


>gi|66529005 ATP-binding cassette, sub-family C, member 5 isoform 1
           [Homo sapiens]
          Length = 1437

 Score =  404 bits (1038), Expect = e-113
 Identities = 198/199 (99%), Positives = 198/199 (99%)

Query: 1   MKDIDIGKEYIIPSPGYRSVRERTSTSGTHRDREDSKFRRTRPLECQDALETAARAEGLS 60
           MKDIDIGKEYIIPSPGYRSVRERTSTSGTHRDREDSKFRRTRPLECQDALETAARAEGLS
Sbjct: 1   MKDIDIGKEYIIPSPGYRSVRERTSTSGTHRDREDSKFRRTRPLECQDALETAARAEGLS 60

Query: 61  LDASMHSQLRILDEEHPKGKYHHGLSALKPIRTTSKHQHPVDNAGLFSCMTFSWLSSLAR 120
           LDASMHSQLRILDEEHPKGKYHHGLSALKPIRTTSKHQHPVDNAGLFSCMTFSWLSSLAR
Sbjct: 61  LDASMHSQLRILDEEHPKGKYHHGLSALKPIRTTSKHQHPVDNAGLFSCMTFSWLSSLAR 120

Query: 121 VAHKKGELSMEDVWSLSKHESSDVNCRRLERLWQEELNEVGPDAASLRRVVWIFCRTRLI 180
           VAHKKGELSMEDVWSLSKHESSDVNCRRLERLWQEELNEVGPDAASLRRVVWIFCRTRLI
Sbjct: 121 VAHKKGELSMEDVWSLSKHESSDVNCRRLERLWQEELNEVGPDAASLRRVVWIFCRTRLI 180

Query: 181 LSIVCLMITQLAGFSGPNF 199
           LSIVCLMITQLAGFSGP F
Sbjct: 181 LSIVCLMITQLAGFSGPAF 199


>gi|89111135 ATP-binding cassette protein C12 [Homo sapiens]
          Length = 1359

 Score = 84.0 bits (206), Expect = 9e-17
 Identities = 45/119 (37%), Positives = 72/119 (60%), Gaps = 2/119 (1%)

Query: 80  KYHHGLSALKPIRTTSK-HQHPVDNAGLFSCMTFSWLSSLARVAHKKGELSMEDVWSLSK 138
           +Y   L  + P+R  ++   +PVD+AGL S  TFSWL+ +    +++  L+++ +  LS 
Sbjct: 24  RYDPSLKTMIPVRPCARLAPNPVDDAGLLSFATFSWLTPVMVKGYRQ-RLTVDTLPPLST 82

Query: 139 HESSDVNCRRLERLWQEELNEVGPDAASLRRVVWIFCRTRLILSIVCLMITQLAGFSGP 197
           ++SSD N +R   LW EE+  VGP+ ASL  VVW F RTR+++ IV  ++  +    GP
Sbjct: 83  YDSSDTNAKRFRVLWDEEVARVGPEKASLSHVVWKFQRTRVLMDIVANILCIIMAAIGP 141


>gi|21729876 ATP-binding cassette, sub-family C, member 11 isoform b
           [Homo sapiens]
          Length = 1344

 Score = 76.6 bits (187), Expect = 1e-14
 Identities = 47/122 (38%), Positives = 66/122 (54%), Gaps = 6/122 (4%)

Query: 77  PKGKYHHGLSALKPIRTTSKHQ--HPVDNAGLFSCMTFSWLSSLARVAHKKGELSMEDVW 134
           P GKY   L  + P R   +     P+DNAGLFS +T SWL+ L  +   +  L    + 
Sbjct: 60  PWGKYDAALRTMIPFRPKPRFPAPQPLDNAGLFSYLTVSWLTPLM-IQSLRSRLDENTIP 118

Query: 135 SLSKHESSDVNCRRLERLWQEELNEVGPDAASLRRVVWIFCRTRLILSI---VCLMITQL 191
            LS H++SD N +RL RLW+EE++  G + AS+  V+  F RTRLI      +C  I  +
Sbjct: 119 PLSVHDASDKNVQRLHRLWEEEVSRRGIEKASVLLVMLRFQRTRLIFDALLGICFCIASV 178

Query: 192 AG 193
            G
Sbjct: 179 LG 180


>gi|21729873 ATP-binding cassette, sub-family C, member 11 isoform a
           [Homo sapiens]
          Length = 1382

 Score = 76.6 bits (187), Expect = 1e-14
 Identities = 47/122 (38%), Positives = 66/122 (54%), Gaps = 6/122 (4%)

Query: 77  PKGKYHHGLSALKPIRTTSKHQ--HPVDNAGLFSCMTFSWLSSLARVAHKKGELSMEDVW 134
           P GKY   L  + P R   +     P+DNAGLFS +T SWL+ L  +   +  L    + 
Sbjct: 60  PWGKYDAALRTMIPFRPKPRFPAPQPLDNAGLFSYLTVSWLTPLM-IQSLRSRLDENTIP 118

Query: 135 SLSKHESSDVNCRRLERLWQEELNEVGPDAASLRRVVWIFCRTRLILSI---VCLMITQL 191
            LS H++SD N +RL RLW+EE++  G + AS+  V+  F RTRLI      +C  I  +
Sbjct: 119 PLSVHDASDKNVQRLHRLWEEEVSRRGIEKASVLLVMLRFQRTRLIFDALLGICFCIASV 178

Query: 192 AG 193
            G
Sbjct: 179 LG 180


>gi|15149474 ATP-binding cassette, sub-family C, member 11 isoform a
           [Homo sapiens]
          Length = 1382

 Score = 76.6 bits (187), Expect = 1e-14
 Identities = 47/122 (38%), Positives = 66/122 (54%), Gaps = 6/122 (4%)

Query: 77  PKGKYHHGLSALKPIRTTSKHQ--HPVDNAGLFSCMTFSWLSSLARVAHKKGELSMEDVW 134
           P GKY   L  + P R   +     P+DNAGLFS +T SWL+ L  +   +  L    + 
Sbjct: 60  PWGKYDAALRTMIPFRPKPRFPAPQPLDNAGLFSYLTVSWLTPLM-IQSLRSRLDENTIP 118

Query: 135 SLSKHESSDVNCRRLERLWQEELNEVGPDAASLRRVVWIFCRTRLILSI---VCLMITQL 191
            LS H++SD N +RL RLW+EE++  G + AS+  V+  F RTRLI      +C  I  +
Sbjct: 119 PLSVHDASDKNVQRLHRLWEEEVSRRGIEKASVLLVMLRFQRTRLIFDALLGICFCIASV 178

Query: 192 AG 193
            G
Sbjct: 179 LG 180


>gi|157502203 ATP-binding cassette, sub-family C, member 4 isoform 2
           [Homo sapiens]
          Length = 859

 Score = 39.3 bits (90), Expect = 0.002
 Identities = 24/92 (26%), Positives = 48/92 (52%), Gaps = 4/92 (4%)

Query: 99  HPVDNAGLFSCMTFSWLSSLARVAHKKGELSMEDVWSLSKHESSDVNCRRLERLWQEELN 158
           +P+ +A L S + F WL+ L ++ HK+  L  +D++S+   + S      L+  W +E+ 
Sbjct: 11  NPLQDANLCSRVFFWWLNPLFKIGHKR-RLEEDDMYSVLPEDRSQHLGEELQGFWDKEVL 69

Query: 159 EVGPDA---ASLRRVVWIFCRTRLILSIVCLM 187
               DA   +  R ++  + ++ L+L I  L+
Sbjct: 70  RAENDAQKPSLTRAIIKCYWKSYLVLGIFTLI 101


>gi|157502201 ATP-binding cassette, sub-family C, member 4 isoform 1
           [Homo sapiens]
          Length = 1325

 Score = 39.3 bits (90), Expect = 0.002
 Identities = 24/92 (26%), Positives = 48/92 (52%), Gaps = 4/92 (4%)

Query: 99  HPVDNAGLFSCMTFSWLSSLARVAHKKGELSMEDVWSLSKHESSDVNCRRLERLWQEELN 158
           +P+ +A L S + F WL+ L ++ HK+  L  +D++S+   + S      L+  W +E+ 
Sbjct: 11  NPLQDANLCSRVFFWWLNPLFKIGHKR-RLEEDDMYSVLPEDRSQHLGEELQGFWDKEVL 69

Query: 159 EVGPDA---ASLRRVVWIFCRTRLILSIVCLM 187
               DA   +  R ++  + ++ L+L I  L+
Sbjct: 70  RAENDAQKPSLTRAIIKCYWKSYLVLGIFTLI 101


>gi|90421313 cystic fibrosis transmembrane conductance regulator
           [Homo sapiens]
          Length = 1480

 Score = 37.0 bits (84), Expect = 0.012
 Identities = 17/58 (29%), Positives = 32/58 (55%), Gaps = 1/58 (1%)

Query: 100 PVDNAGLFSCMTFSWLSSLARVAHKKGELSMEDVWSLSKHESSDVNCRRLERLWQEEL 157
           P++ A + S + FSW   + R  +++  L + D++ +   +S+D    +LER W  EL
Sbjct: 5   PLEKASVVSKLFFSWTRPILRKGYRQ-RLELSDIYQIPSVDSADNLSEKLEREWDREL 61


>gi|221316556 ATP-binding cassette, sub-family C, member 3 isoform 2
           [Homo sapiens]
          Length = 572

 Score = 34.7 bits (78), Expect = 0.059
 Identities = 17/75 (22%), Positives = 37/75 (49%), Gaps = 1/75 (1%)

Query: 92  RTTSKHQHPVDNAGLFSCMTFSWLSSLARVAHKKGELSMEDVWSLSKHESSDVNCRRLER 151
           +    + +P  +AG  S + F W + +A   ++   L  +D+WSL + + S +  ++L  
Sbjct: 200 KNVDPNPYPETSAGFLSRLFFWWFTKMAIYGYRH-PLEEKDLWSLKEEDRSQMVVQQLLE 258

Query: 152 LWQEELNEVGPDAAS 166
            W+++  +     AS
Sbjct: 259 AWRKQEKQTARHKAS 273


>gi|9955970 ATP-binding cassette, sub-family C, member 3 isoform 1
           [Homo sapiens]
          Length = 1527

 Score = 34.7 bits (78), Expect = 0.059
 Identities = 17/75 (22%), Positives = 37/75 (49%), Gaps = 1/75 (1%)

Query: 92  RTTSKHQHPVDNAGLFSCMTFSWLSSLARVAHKKGELSMEDVWSLSKHESSDVNCRRLER 151
           +    + +P  +AG  S + F W + +A   ++   L  +D+WSL + + S +  ++L  
Sbjct: 200 KNVDPNPYPETSAGFLSRLFFWWFTKMAIYGYRH-PLEEKDLWSLKEEDRSQMVVQQLLE 258

Query: 152 LWQEELNEVGPDAAS 166
            W+++  +     AS
Sbjct: 259 AWRKQEKQTARHKAS 273


>gi|190343023 ATP-binding cassette, sub-family C, member 6 isoform 1
           [Homo sapiens]
          Length = 1503

 Score = 33.9 bits (76), Expect = 0.10
 Identities = 19/54 (35%), Positives = 28/54 (51%), Gaps = 1/54 (1%)

Query: 100 PVDNAGLFSCMTFSWLSSLARVAHKKGELSMEDVWSLSKHESSDVNCRRLERLW 153
           P   A   S  TF W+S L    +++  L  +D+WSL +  SS+    RLE+ W
Sbjct: 204 PETGAAFPSKATFWWVSGLVWRGYRR-PLRPKDLWSLGRENSSEELVSRLEKEW 256


>gi|239756495 PREDICTED: hypothetical protein [Homo sapiens]
          Length = 1312

 Score = 33.9 bits (76), Expect = 0.10
 Identities = 19/54 (35%), Positives = 28/54 (51%), Gaps = 1/54 (1%)

Query: 100 PVDNAGLFSCMTFSWLSSLARVAHKKGELSMEDVWSLSKHESSDVNCRRLERLW 153
           P   A   S  TF W+S L    +++  L  +D+WSL +  SS+    RLE+ W
Sbjct: 13  PETGAAFPSKATFWWVSGLVWRGYRR-PLRPKDLWSLGRENSSEELVSRLEKEW 65


>gi|134142345 ATP-binding cassette, sub-family C, member 1 isoform 3
           [Homo sapiens]
          Length = 1475

 Score = 32.7 bits (73), Expect = 0.22
 Identities = 17/57 (29%), Positives = 32/57 (56%), Gaps = 1/57 (1%)

Query: 100 PVDNAGLFSCMTFSWLSSLARVAHKKGELSMEDVWSLSKHESSDVNCRRLERLWQEE 156
           P  +A   S +TF W++ L    +++  L   D+WSL+K ++S+     L + W++E
Sbjct: 209 PESSASFLSRITFWWITGLIVRGYRQ-PLEGSDLWSLNKEDTSEQVVPVLVKNWKKE 264


>gi|134142342 ATP-binding cassette, sub-family C, member 1 isoform 4
           [Homo sapiens]
          Length = 1416

 Score = 32.7 bits (73), Expect = 0.22
 Identities = 17/57 (29%), Positives = 32/57 (56%), Gaps = 1/57 (1%)

Query: 100 PVDNAGLFSCMTFSWLSSLARVAHKKGELSMEDVWSLSKHESSDVNCRRLERLWQEE 156
           P  +A   S +TF W++ L    +++  L   D+WSL+K ++S+     L + W++E
Sbjct: 209 PESSASFLSRITFWWITGLIVRGYRQ-PLEGSDLWSLNKEDTSEQVVPVLVKNWKKE 264


>gi|134142340 ATP-binding cassette, sub-family C, member 1 isoform 2
           [Homo sapiens]
          Length = 1472

 Score = 32.7 bits (73), Expect = 0.22
 Identities = 17/57 (29%), Positives = 32/57 (56%), Gaps = 1/57 (1%)

Query: 100 PVDNAGLFSCMTFSWLSSLARVAHKKGELSMEDVWSLSKHESSDVNCRRLERLWQEE 156
           P  +A   S +TF W++ L    +++  L   D+WSL+K ++S+     L + W++E
Sbjct: 209 PESSASFLSRITFWWITGLIVRGYRQ-PLEGSDLWSLNKEDTSEQVVPVLVKNWKKE 264


>gi|134142335 ATP-binding cassette, sub-family C, member 1 isoform 5
           [Homo sapiens]
          Length = 1466

 Score = 32.7 bits (73), Expect = 0.22
 Identities = 17/57 (29%), Positives = 32/57 (56%), Gaps = 1/57 (1%)

Query: 100 PVDNAGLFSCMTFSWLSSLARVAHKKGELSMEDVWSLSKHESSDVNCRRLERLWQEE 156
           P  +A   S +TF W++ L    +++  L   D+WSL+K ++S+     L + W++E
Sbjct: 209 PESSASFLSRITFWWITGLIVRGYRQ-PLEGSDLWSLNKEDTSEQVVPVLVKNWKKE 264


>gi|134142337 ATP-binding cassette, sub-family C, member 1 isoform 1
           [Homo sapiens]
          Length = 1531

 Score = 32.7 bits (73), Expect = 0.22
 Identities = 17/57 (29%), Positives = 32/57 (56%), Gaps = 1/57 (1%)

Query: 100 PVDNAGLFSCMTFSWLSSLARVAHKKGELSMEDVWSLSKHESSDVNCRRLERLWQEE 156
           P  +A   S +TF W++ L    +++  L   D+WSL+K ++S+     L + W++E
Sbjct: 209 PESSASFLSRITFWWITGLIVRGYRQ-PLEGSDLWSLNKEDTSEQVVPVLVKNWKKE 264


>gi|4557481 ATP-binding cassette, sub-family C (CFTR/MRP), member 2
           [Homo sapiens]
          Length = 1545

 Score = 32.0 bits (71), Expect = 0.38
 Identities = 16/61 (26%), Positives = 30/61 (49%), Gaps = 1/61 (1%)

Query: 99  HPVDNAGLFSCMTFSWLSSLARVAHKKGELSMEDVWSLSKHESSDVNCRRLERLWQEELN 158
           +P   A   S +T+SW  S+    +K+  L++EDVW + +   +     + E   + EL 
Sbjct: 193 NPSSIASFLSSITYSWYDSIILKGYKR-PLTLEDVWEVDEEMKTKTLVSKFETHMKRELQ 251

Query: 159 E 159
           +
Sbjct: 252 K 252


>gi|52630326 chromodomain helicase DNA binding protein 3 isoform 1
            [Homo sapiens]
          Length = 2000

 Score = 29.6 bits (65), Expect = 1.9
 Identities = 19/58 (32%), Positives = 29/58 (50%), Gaps = 8/58 (13%)

Query: 13   PSPGYRSVRERTSTSGTHRDREDSKFRRTRPLECQDALETAARAEGLSLDASMHSQLR 70
            P PGYR  RE+++T  T  +R + K     PL+ Q+  E   R EG + D      ++
Sbjct: 1630 PEPGYRGDREKSATESTPGERGEEK-----PLDGQEHRE---RPEGETGDLGKREDVK 1679


>gi|158420731 chromodomain helicase DNA binding protein 3 isoform 3
            [Homo sapiens]
          Length = 2059

 Score = 29.6 bits (65), Expect = 1.9
 Identities = 19/58 (32%), Positives = 29/58 (50%), Gaps = 8/58 (13%)

Query: 13   PSPGYRSVRERTSTSGTHRDREDSKFRRTRPLECQDALETAARAEGLSLDASMHSQLR 70
            P PGYR  RE+++T  T  +R + K     PL+ Q+  E   R EG + D      ++
Sbjct: 1689 PEPGYRGDREKSATESTPGERGEEK-----PLDGQEHRE---RPEGETGDLGKREDVK 1738


>gi|118582255 ATP-binding cassette, sub-family C, member 8 [Homo
           sapiens]
          Length = 1581

 Score = 29.3 bits (64), Expect = 2.5
 Identities = 27/99 (27%), Positives = 46/99 (46%), Gaps = 12/99 (12%)

Query: 106 LFSCMTFSWLSSLARVAHKKGELSMEDVWSLSKHESSDVNCRRLERLWQEELNE--VGPD 163
           L S  T+ W+++  + AHKK  + +  +  L     +  N +RL   +  ++ +   G  
Sbjct: 224 LLSKGTYWWMNAFIKTAHKK-PIDLRAIGKLPIAMRALTNYQRLCEAFDAQVRKDIQGTQ 282

Query: 164 AASLRRVVW-----IFCRTRLILSIVCLMITQLAGFSGP 197
            A   R +W      F R RL+LS    ++  L GF+GP
Sbjct: 283 GA---RAIWQALSHAFGR-RLVLSSTFRILADLLGFAGP 317


>gi|242247001 clathrin, heavy polypeptide-like 1 isoform 2 [Homo
           sapiens]
          Length = 1583

 Score = 28.9 bits (63), Expect = 3.2
 Identities = 18/55 (32%), Positives = 27/55 (49%), Gaps = 5/55 (9%)

Query: 118 LARVAHKKGELSMEDVW-----SLSKHESSDVNCRRLERLWQEELNEVGPDAASL 167
           LA VA+++G+  +E +      SL K E+  + CR+   LW   L E  P    L
Sbjct: 916 LACVAYERGQCDLELIKVCNENSLFKSEARYLVCRKDPELWAHVLEETNPSRRQL 970


>gi|242246985 clathrin, heavy polypeptide-like 1 isoform 1 [Homo
           sapiens]
          Length = 1640

 Score = 28.9 bits (63), Expect = 3.2
 Identities = 18/55 (32%), Positives = 27/55 (49%), Gaps = 5/55 (9%)

Query: 118 LARVAHKKGELSMEDVW-----SLSKHESSDVNCRRLERLWQEELNEVGPDAASL 167
           LA VA+++G+  +E +      SL K E+  + CR+   LW   L E  P    L
Sbjct: 916 LACVAYERGQCDLELIKVCNENSLFKSEARYLVCRKDPELWAHVLEETNPSRRQL 970


>gi|110832839 ATP-binding cassette, sub-family C, member 9 isoform
           SUR2A-delta-14 [Homo sapiens]
          Length = 1513

 Score = 28.1 bits (61), Expect = 5.5
 Identities = 27/106 (25%), Positives = 49/106 (46%), Gaps = 8/106 (7%)

Query: 106 LFSCMTFSWLSSLARVAHKKGELSMEDVWSLSKHESSDVNCRRLERLWQEELNEVGPDAA 165
           L S  T+ W+++L   AHKK  + ++ +  L     +  N   L+  ++E+  +V  D  
Sbjct: 222 LLSKATYWWMNTLIISAHKK-PIDLKAIGKLPIAMRAVTNYVCLKDAYEEQKKKVA-DHP 279

Query: 166 SLRRVVWI-----FCRTRLILSIVCLMITQLAGFSGPNFQDGCILR 206
           +    +W+     F R  ++LS     +  L GF+GP    G + R
Sbjct: 280 NRTPSIWLAMYRAFGRP-ILLSSTFRYLADLLGFAGPLCISGIVQR 324


>gi|110832835 ATP-binding cassette, sub-family C, member 9 isoform
           SUR2A [Homo sapiens]
          Length = 1549

 Score = 28.1 bits (61), Expect = 5.5
 Identities = 27/106 (25%), Positives = 49/106 (46%), Gaps = 8/106 (7%)

Query: 106 LFSCMTFSWLSSLARVAHKKGELSMEDVWSLSKHESSDVNCRRLERLWQEELNEVGPDAA 165
           L S  T+ W+++L   AHKK  + ++ +  L     +  N   L+  ++E+  +V  D  
Sbjct: 222 LLSKATYWWMNTLIISAHKK-PIDLKAIGKLPIAMRAVTNYVCLKDAYEEQKKKVA-DHP 279

Query: 166 SLRRVVWI-----FCRTRLILSIVCLMITQLAGFSGPNFQDGCILR 206
           +    +W+     F R  ++LS     +  L GF+GP    G + R
Sbjct: 280 NRTPSIWLAMYRAFGRP-ILLSSTFRYLADLLGFAGPLCISGIVQR 324


>gi|110832837 ATP-binding cassette, sub-family C, member 9 isoform
           SUR2B [Homo sapiens]
          Length = 1549

 Score = 28.1 bits (61), Expect = 5.5
 Identities = 27/106 (25%), Positives = 49/106 (46%), Gaps = 8/106 (7%)

Query: 106 LFSCMTFSWLSSLARVAHKKGELSMEDVWSLSKHESSDVNCRRLERLWQEELNEVGPDAA 165
           L S  T+ W+++L   AHKK  + ++ +  L     +  N   L+  ++E+  +V  D  
Sbjct: 222 LLSKATYWWMNTLIISAHKK-PIDLKAIGKLPIAMRAVTNYVCLKDAYEEQKKKVA-DHP 279

Query: 166 SLRRVVWI-----FCRTRLILSIVCLMITQLAGFSGPNFQDGCILR 206
           +    +W+     F R  ++LS     +  L GF+GP    G + R
Sbjct: 280 NRTPSIWLAMYRAFGRP-ILLSSTFRYLADLLGFAGPLCISGIVQR 324


>gi|62912474 leucine-rich repeat-containing G protein-coupled
           receptor 6 isoform 3 [Homo sapiens]
          Length = 828

 Score = 28.1 bits (61), Expect = 5.5
 Identities = 28/107 (26%), Positives = 47/107 (43%), Gaps = 15/107 (14%)

Query: 47  QDALETAARAEGLSLDASMHSQLRILDEEHPKGKYHHGLSALKPIRTTSKHQHPVDN--- 103
           Q+     +   G   D SM++    L E  P G +HH L  L+ +R +  H   +     
Sbjct: 14  QNLSRAGSARRGAPRDLSMNN----LTELQP-GLFHH-LRFLEELRLSGNHLSHIPGQAF 67

Query: 104 AGLFSCMTFSWLSSLARVAHKKGELSMEDVWSLSKHESSDVNCRRLE 150
           +GL+S      L  L    ++ G +  E +W L   +S D+N  +L+
Sbjct: 68  SGLYS------LKILMLQNNQLGGIPAEALWELPSLQSLDLNYNKLQ 108


>gi|239750869 PREDICTED: hypothetical protein XP_002347589 [Homo
           sapiens]
          Length = 354

 Score = 27.7 bits (60), Expect = 7.2
 Identities = 17/71 (23%), Positives = 33/71 (46%), Gaps = 8/71 (11%)

Query: 90  PIRTTSKHQHPVDNAGLFSCMTFSWLSSLARVAHKKGELSMEDVWSLSKHESSDVNCRRL 149
           PI T  +  H   + G+ +    ++L + A V HK+G   ++D+          ++   +
Sbjct: 41  PILTPREGSHIGGSLGVLAASGLAFLDTAASVEHKEGHRQVKDMLL--------IHSCYI 92

Query: 150 ERLWQEELNEV 160
            R+W  EL+ V
Sbjct: 93  SRIWIAELSTV 103


>gi|239745469 PREDICTED: nuclear pore complex interacting
           protein-like 1 [Homo sapiens]
          Length = 371

 Score = 27.7 bits (60), Expect = 7.2
 Identities = 22/82 (26%), Positives = 40/82 (48%), Gaps = 12/82 (14%)

Query: 106 LFSCMTFSWLSSLARVAHKKGELSMEDV-WSLSKHESS-DVNCRRLERLW-----QEELN 158
           +F C+ + WLS   +  H      ++ + WS + H+ S DV     +R W     +++ N
Sbjct: 1   MFCCLGYEWLSGGCKTWHSAWVSFLKTIFWSRNGHDGSMDVQ----QRAWRSNRSRQKGN 56

Query: 159 EVG-PDAASLRRVVWIFCRTRL 179
           ++G  D  +LRR V    R ++
Sbjct: 57  KIGLKDVITLRRHVETKVRAKI 78


  Database: hs.faa
    Posted date:  Aug 4, 2009  4:42 PM
  Number of letters in database: 18,247,518
  Number of sequences in database:  37,866
  
Lambda     K      H
   0.320    0.133    0.405 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 8,142,664
Number of Sequences: 37866
Number of extensions: 320763
Number of successful extensions: 787
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 8
Number of HSP's successfully gapped in prelim test: 26
Number of HSP's that attempted gapping in prelim test: 772
Number of HSP's gapped (non-prelim): 36
length of query: 208
length of database: 18,247,518
effective HSP length: 98
effective length of query: 110
effective length of database: 14,536,650
effective search space: 1599031500
effective search space used: 1599031500
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 59 (27.3 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.