Guide to the Human Genome
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Name: DDI2 Sequence: fasta or formatted (399aa) NCBI GI: 62955833
Description:

DNA-damage inducible protein 2

Referenced in:

Cullins and SCF Complexes

Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             8.3         33           2
 C cysteine            2.0          8           1
 D aspartate           6.0         24           1
 E glutamate           9.3         37           2
 F phenylalanine       3.3         13           1
 G glycine             5.5         22           1
 H histidine           1.8          7           1
 I isoleucine          5.5         22           2
 K lysine              3.5         14           2
 L leucine            10.8         43           2
 M methionine          2.8         11           1
 N asparagine          3.3         13           1
 P proline             6.5         26           2
 Q glutamine           7.0         28           3
 R arginine            7.3         29           2
 S serine              6.8         27           2
 T threonine           3.3         13           2
 V valine              5.8         23           2
 W tryptophan          0.3          1           1
 Y tyrosine            1.3          5           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   DNA-damage inducible protein 2 
DDI1                  0.701   DDI1, DNA-damage inducible 1, homolog 1 
NRIP2                 0.041   nuclear receptor interacting protein 2 
NRIP3                 0.038   nuclear receptor interacting protein 3 
UBQLN4                0.013   ataxin-1 ubiquitin-like interacting protein 
POU6F2                0.013   POU domain, class 6, transcription factor 2 
TP53BP2               0.013   tumor protein p53 binding protein, 2 isoform 1 [Hom...
SYN2                  0.013   synapsin II isoform IIa 
GIGYF2                0.012   GRB10 interacting GYF protein 2 isoform c 
GIGYF2                0.012   GRB10 interacting GYF protein 2 isoform a 
GIGYF2                0.012   GRB10 interacting GYF protein 2 isoform b 
GIGYF2                0.012   GRB10 interacting GYF protein 2 isoform b 
UBQLN1                0.012   ubiquilin 1 isoform 2 
UBQLN1                0.012   ubiquilin 1 isoform 1 
BUD13                 0.010   BUD13 homolog isoform 2 
PCNT                  0.010   pericentrin 
SIPA1L3               0.010   signal-induced proliferation-associated 1 like 3 [Ho...
RNF222                0.010   ring finger protein 222 
RNF222                0.010   PREDICTED: ring finger protein 222 
MLL2                  0.010   myeloid/lymphoid or mixed-lineage leukemia 2 
PPP1R13L              0.009   protein phosphatase 1, regulatory subunit 13 like [...
PPP1R13L              0.009   protein phosphatase 1, regulatory subunit 13 like [H...
MEF2D                 0.009   myocyte enhancer factor 2D 
TNIK                  0.009   TRAF2 and NCK interacting kinase isoform 8 
TNIK                  0.009   TRAF2 and NCK interacting kinase isoform 6 
TNIK                  0.009   TRAF2 and NCK interacting kinase isoform 4 
TNIK                  0.009   TRAF2 and NCK interacting kinase isoform 2 
MTHFD1L               0.009   methylenetetrahydrofolate dehydrogenase (NADP+ depen...
AP1B1                 0.009   adaptor-related protein complex 1 beta 1 subunit iso...
AP1B1                 0.009   adaptor-related protein complex 1 beta 1 subunit iso...
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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