Guide to the Human Genome
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Name: DDI1 Sequence: fasta or formatted (396aa) NCBI GI: 48717485
Description:

DDI1, DNA-damage inducible 1, homolog 1

Referenced in:

Cullins and SCF Complexes

Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             6.1         24           2
 C cysteine            2.3          9           1
 D aspartate           5.1         20           1
 E glutamate           8.3         33           3
 F phenylalanine       2.5         10           1
 G glycine             7.1         28           1
 H histidine           2.3          9           1
 I isoleucine          6.1         24           2
 K lysine              3.5         14           2
 L leucine            11.1         44           2
 M methionine          3.5         14           1
 N asparagine          3.0         12           1
 P proline             5.1         20           2
 Q glutamine           7.6         30           4
 R arginine            7.3         29           2
 S serine              7.8         31           3
 T threonine           3.5         14           2
 V valine              6.3         25           2
 W tryptophan          0.3          1           1
 Y tyrosine            1.3          5           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   DDI1, DNA-damage inducible 1, homolog 1 
DDI2                  0.707   DNA-damage inducible protein 2 
NRIP3                 0.044   nuclear receptor interacting protein 3 
NRIP2                 0.040   nuclear receptor interacting protein 2 
UBQLN4                0.020   ataxin-1 ubiquitin-like interacting protein 
MYH14                 0.018   myosin, heavy chain 14 isoform 1 
MYH14                 0.018   myosin, heavy chain 14 isoform 2 
MYH14                 0.018   myosin, heavy chain 14 isoform 3 
CCDC86                0.016   coiled-coil domain containing 86 
UBQLNL                0.016   ubiquilin-like 
DIP2A                 0.015   disco-interacting protein 2A isoform f 
ARHGEF18              0.015   Rho/Rac guanine nucleotide exchange factor 18 isofo...
ARHGEF18              0.015   Rho/Rac guanine nucleotide exchange factor 18 isofor...
LOC100291136          0.015   PREDICTED: hypothetical protein XP_002347630 
LOC100287129          0.015   PREDICTED: hypothetical protein XP_002343480 
FAM178B               0.015   hypothetical protein LOC51252 isoform A 
RAD23A                0.013   UV excision repair protein RAD23 homolog A 
LOC100289089          0.012   PREDICTED: hypothetical protein XP_002343359 
CTDP1                 0.012   CTD (carboxy-terminal domain, RNA polymerase II, pol...
CTDP1                 0.012   CTD (carboxy-terminal domain, RNA polymerase II, pol...
NCOA6                 0.012   nuclear receptor coactivator 6 
DYDC1                 0.009   DPY30 domain containing 1 
MLL2                  0.009   myeloid/lymphoid or mixed-lineage leukemia 2 
DIP2A                 0.009   disco-interacting protein 2A isoform e 
PLEC1                 0.009   plectin 1 isoform 11 
PLEC1                 0.009   plectin 1 isoform 10 
PLEC1                 0.009   plectin 1 isoform 8 
PLEC1                 0.009   plectin 1 isoform 7 
PLEC1                 0.009   plectin 1 isoform 6 
PLEC1                 0.009   plectin 1 isoform 3 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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