Guide to the Human Genome
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Name: BUD13 Sequence: fasta or formatted (485aa) NCBI GI: 229577273
Description:

BUD13 homolog isoform 2

Not currently referenced in the text

Other entries for this name:
alt prot {619aa} BUD13 homolog isoform 1
Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             6.8         33           3
 C cysteine            0.2          1           1
 D aspartate           9.9         48           3
 E glutamate           7.4         36           4
 F phenylalanine       2.1         10           1
 G glycine             5.6         27           2
 H histidine           2.9         14           1
 I isoleucine          1.4          7           1
 K lysine              8.0         39           2
 L leucine             5.4         26           2
 M methionine          2.1         10           1
 N asparagine          2.7         13           1
 P proline             9.5         46           3
 Q glutamine           4.7         23           4
 R arginine           12.4         60           3
 S serine              9.7         47           2
 T threonine           3.1         15           2
 V valine              3.1         15           2
 W tryptophan          1.2          6           1
 Y tyrosine            1.9          9           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   BUD13 homolog isoform 2 
BUD13                 0.901   BUD13 homolog isoform 1 
SRRM1                 0.051   serine/arginine repetitive matrix 1 
IWS1                  0.050   IWS1 homolog 
NIPBL                 0.038   delangin isoform B 
NIPBL                 0.038   delangin isoform A 
FLJ37078              0.036   hypothetical protein LOC222183 
C2orf16               0.035   hypothetical protein LOC84226 
MAP7D1                0.033   MAP7 domain containing 1 
ZRANB2                0.032   zinc finger protein 265 isoform 1 
LOC100170229          0.032   hypothetical protein LOC100170229 
ZC3H13                0.031   zinc finger CCCH-type containing 13 
RBM25                 0.030   RNA binding motif protein 25 
LOC100286959          0.030   PREDICTED: hypothetical protein XP_002343921 
TRIOBP                0.030   TRIO and F-actin binding protein isoform 6 
ANK2                  0.028   ankyrin 2 isoform 1 
HRC                   0.028   histidine rich calcium binding protein precursor [Hom...
NEFH                  0.027   neurofilament, heavy polypeptide 200kDa 
TCHH                  0.026   trichohyalin 
SFRS12                0.026   splicing factor, arginine/serine-rich 12 isoform a ...
SFRS12                0.026   splicing factor, arginine/serine-rich 12 isoform b [...
DDX23                 0.025   DEAD (Asp-Glu-Ala-Asp) box polypeptide 23 
LOC100133001          0.025   PREDICTED: similar to hCG30082, partial 
SRRM2                 0.025   splicing coactivator subunit SRm300 
SFRS11                0.024   splicing factor, arginine/serine-rich 11 
KIAA1853              0.023   KIAA1853 protein 
LOC283685             0.023   PREDICTED: golgi autoantigen, golgin subfamily a-li...
LOC643446             0.022   PREDICTED: similar to ribonucleic acid binding prot...
LOC643446             0.022   PREDICTED: similar to ribonucleic acid binding prot...
LOC643446             0.022   PREDICTED: similar to ribonucleic acid binding prot...
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
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