Guide to the Human Genome
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Name: GIGYF2 Sequence: fasta or formatted (1299aa) NCBI GI: 42476299
Description:

GRB10 interacting GYF protein 2 isoform b

Referenced in:

Receptor Tyrosine Kinases

Other entries for this name:
alt mRNA [1299aa] GRB10 interacting GYF protein 2 isoform b
alt prot [1320aa] GRB10 interacting GYF protein 2 isoform a
alt prot [1293aa] GRB10 interacting GYF protein 2 isoform c
Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             6.1         79           2
 C cysteine            0.5          6           1
 D aspartate           4.3         56           3
 E glutamate          12.8        166           4
 F phenylalanine       2.8         36           1
 G glycine             6.0         78           4
 H histidine           1.5         19           1
 I isoleucine          2.0         26           2
 K lysine              5.5         71           5
 L leucine             8.0        104           3
 M methionine          2.4         31           1
 N asparagine          3.5         46           2
 P proline             5.7         74           3
 Q glutamine          11.6        151           9
 R arginine            9.2        119           4
 S serine              7.6         99           4
 T threonine           3.8         49           3
 V valine              3.9         51           2
 W tryptophan          1.7         22           1
 Y tyrosine            1.2         16           2
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   GRB10 interacting GYF protein 2 isoform b 
GIGYF2                1.000   GRB10 interacting GYF protein 2 isoform b 
GIGYF2                0.993   GRB10 interacting GYF protein 2 isoform c 
GIGYF2                0.993   GRB10 interacting GYF protein 2 isoform a 
GIGYF1                0.284   PERQ amino acid rich, with GYF domain 1 
TCHH                  0.051   trichohyalin 
LOC283685             0.045   PREDICTED: golgi autoantigen, golgin subfamily a-li...
LOC440243             0.043   PREDICTED: Putative golgin subfamily A member 6-lik...
LOC645202             0.043   PREDICTED: hypothetical protein LOC645202 
LOC727832             0.043   golgi autoantigen, golgin subfamily a-like 
LOC283685             0.042   PREDICTED: golgi autoantigen, golgin subfamily a-li...
LOC400352             0.042   PREDICTED: similar to Putative golgin subfamily A m...
LOC100132816          0.042   PREDICTED: similar to Putative golgin subfamily A m...
LOC100133758          0.042   PREDICTED: hypothetical protein, partial 
LOC283767             0.040   golgi autoantigen, golgin subfamily a-like 
INCENP                0.037   inner centromere protein antigens 135/155kDa isofor...
INCENP                0.035   inner centromere protein antigens 135/155kDa isofor...
PLEC1                 0.035   plectin 1 isoform 11 
PLEC1                 0.035   plectin 1 isoform 10 
PLEC1                 0.035   plectin 1 isoform 8 
PLEC1                 0.035   plectin 1 isoform 7 
PLEC1                 0.035   plectin 1 isoform 6 
PLEC1                 0.035   plectin 1 isoform 3 
PLEC1                 0.035   plectin 1 isoform 2 
PLEC1                 0.035   plectin 1 isoform 1 
LOC100133220          0.034   PREDICTED: hypothetical protein 
LOC100286959          0.032   PREDICTED: hypothetical protein XP_002343921 
MAP4K4                0.031   mitogen-activated protein kinase kinase kinase kinas...
ZNF853                0.031   zinc finger protein 853 
RBM25                 0.031   RNA binding motif protein 25 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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