Guide to the Human Genome
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Name: TNIK Sequence: fasta or formatted (1323aa) NCBI GI: 239735584
Description:

TRAF2 and NCK interacting kinase isoform 4

Referenced in:

MAP Kinase Pathways

Other entries for this name:
alt prot [1352aa] TRAF2 and NCK interacting kinase isoform 2
alt prot [1331aa] TRAF2 and NCK interacting kinase isoform 3
alt prot [1305aa] TRAF2 and NCK interacting kinase isoform 5
alt prot [1297aa] TRAF2 and NCK interacting kinase isoform 6
alt prot [1276aa] TRAF2 and NCK interacting kinase isoform 7
alt prot [1268aa] TRAF2 and NCK interacting kinase isoform 8
alt prot [1360aa] TRAF2 and NCK interacting kinase isoform 1
Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             5.2         69           3
 C cysteine            0.7          9           1
 D aspartate           4.5         59           2
 E glutamate          10.0        132           6
 F phenylalanine       2.5         33           2
 G glycine             6.2         82           2
 H histidine           3.0         40           2
 I isoleucine          4.8         64           1
 K lysine              6.2         82           3
 L leucine             7.9        105           2
 M methionine          2.3         31           2
 N asparagine          4.1         54           1
 P proline             6.0         80           2
 Q glutamine           5.6         74           3
 R arginine            7.9        105           3
 S serine              9.1        120           6
 T threonine           4.8         63           2
 V valine              5.6         74           2
 W tryptophan          1.1         14           1
 Y tyrosine            2.5         33           2
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   TRAF2 and NCK interacting kinase isoform 4 
TNIK                  0.997   TRAF2 and NCK interacting kinase isoform 3 
TNIK                  0.994   TRAF2 and NCK interacting kinase isoform 2 
TNIK                  0.991   TRAF2 and NCK interacting kinase isoform 1 
TNIK                  0.939   TRAF2 and NCK interacting kinase isoform 8 
TNIK                  0.937   TRAF2 and NCK interacting kinase isoform 7 
TNIK                  0.934   TRAF2 and NCK interacting kinase isoform 6 
TNIK                  0.931   TRAF2 and NCK interacting kinase isoform 5 
MINK1                 0.626   misshapen/NIK-related kinase isoform 1 
MINK1                 0.625   misshapen/NIK-related kinase isoform 2 
MINK1                 0.621   misshapen/NIK-related kinase isoform 3 
MINK1                 0.617   misshapen/NIK-related kinase isoform 4 
MAP4K4                0.611   mitogen-activated protein kinase kinase kinase kinas...
MAP4K4                0.583   mitogen-activated protein kinase kinase kinase kinas...
MAP4K4                0.543   mitogen-activated protein kinase kinase kinase kinas...
NRK                   0.146   Nik related kinase 
MYO3A                 0.107   myosin IIIA 
MYO3B                 0.103   myosin IIIB isoform 1 
MYO3B                 0.103   myosin IIIB isoform 2 
STK4                  0.094   serine/threonine kinase 4 
MAP4K3                0.092   mitogen-activated protein kinase kinase kinase kinas...
MAP4K5                0.091   mitogen-activated protein kinase kinase kinase kinas...
MAP4K5                0.091   mitogen-activated protein kinase kinase kinase kinas...
STK3                  0.089   serine/threonine kinase 3 
STK25                 0.089   serine/threonine kinase 25 
MST4                  0.089   serine/threonine protein kinase MST4 isoform 1 [Homo...
STK24                 0.087   serine/threonine kinase 24 isoform b 
STK24                 0.087   serine/threonine kinase 24 isoform a 
MAP4K2                0.085   mitogen-activated protein kinase kinase kinase kinas...
MAP4K1                0.083   mitogen-activated protein kinase kinase kinase kina...
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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