Guide to the Human Genome
Home | Table of Contents | Search text | Search genes | Search sequences | Purchase | FAQ | Blog | Help
Name: RNF222 Sequence: fasta or formatted (220aa) NCBI GI: 239745703
Description:

PREDICTED: ring finger protein 222

Referenced in:

Ring Finger Proteins

Other entries for this name:
alt mRNA [220aa] ring finger protein 222
alt prot [220aa] PREDICTED: ring finger protein 222
alt prot [220aa] PREDICTED: ring finger protein 222
Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             8.2         18           2
 C cysteine            4.1          9           2
 D aspartate           3.6          8           1
 E glutamate           4.1          9           1
 F phenylalanine       2.3          5           1
 G glycine             5.5         12           1
 H histidine           1.8          4           1
 I isoleucine          2.7          6           1
 K lysine              3.2          7           2
 L leucine            13.6         30           3
 M methionine          1.4          3           1
 N asparagine          0.5          1           1
 P proline            10.0         22           3
 Q glutamine           4.1          9           1
 R arginine            7.7         17           2
 S serine             13.2         29           2
 T threonine           3.2          7           1
 V valine              8.2         18           2
 W tryptophan          1.4          3           1
 Y tyrosine            1.4          3           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   PREDICTED: ring finger protein 222 
RNF222                1.000   ring finger protein 222 
RNF222                0.993   PREDICTED: ring finger protein 222 
RNF222                0.993   PREDICTED: ring finger protein 222 
LOC646862             0.060   PREDICTED: hypothetical protein LOC646862 
LOC646862             0.060   PREDICTED: hypothetical protein LOC646862 
LOC646862             0.060   PREDICTED: hypothetical protein LOC646862 
RNF183                0.057   ring finger protein 183 
LOC401934             0.050   PREDICTED: hypothetical protein 
LOC401934             0.050   PREDICTED: hypothetical protein 
LOC401934             0.050   PREDICTED: hypothetical protein 
TRIM32                0.050   tripartite motif-containing 32 
TRIM32                0.050   tripartite motif-containing 32 
TRIM50                0.048   tripartite motif protein 50A 
RFPL4B                0.048   ret finger protein-like 4B 
RNF182                0.045   ring finger protein 182 
TRIM74                0.045   tripartite motif-containing 74 
TRIM73                0.045   tripartite motif-containing 73 
TRIM72                0.043   tripartite motif-containing 72 
SHPRH                 0.043   SNF2 histone linker PHD RING helicase isoform a [Ho...
SHPRH                 0.043   SNF2 histone linker PHD RING helicase isoform b [Hom...
PHRF1                 0.041   PHD and ring finger domains 1 
SH3RF3                0.041   SH3 domain containing ring finger 3 
SH3RF2                0.041   SH3 domain containing ring finger 2 
ZFYVE9                0.041   zinc finger, FYVE domain containing 9 isoform 3 [Hom...
TRIM59                0.041   tripartite motif-containing 59 
TRIM2                 0.038   tripartite motif-containing 2 isoform 2 
TRIM2                 0.038   tripartite motif-containing 2 isoform 1 
TRIM35                0.038   tripartite motif-containing 35 isoform 2 
MID2                  0.036   midline 2 isoform 2 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


Home | Table of Contents | Search text | Search genes | Search sequences | Purchase | FAQ | Blog | Help

Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

CSHL Press