AP1B1 13998

Name: AP1B1	Sequence: fasta or formatted (949aa)		NCBI GI: 22027651
Description: adaptor-related protein complex 1 beta 1 subunit isoform a		Referenced in: ER, Golgi, and the Secretory Pathway Small RNAs in RNA Processing
Other entries for this name: alt prot [942aa] adaptor-related protein complex 1 beta 1 subunit isoform b
Composition: Amino acid Percentage Count Longest homopolymer A alanine 8.5 81 2 C cysteine 1.7 16 1 D aspartate 6.1 58 2 E glutamate 7.0 66 2 F phenylalanine 2.8 27 2 G glycine 4.5 43 3 H histidine 1.1 10 1 I isoleucine 5.4 51 1 K lysine 6.5 62 3 L leucine 12.4 118 2 M methionine 2.6 25 1 N asparagine 4.5 43 2 P proline 5.9 56 2 Q glutamine 4.2 40 2 R arginine 3.2 30 1 S serine 6.5 62 2 T threonine 5.3 50 3 V valine 8.2 78 2 W tryptophan 0.6 6 1 Y tyrosine 2.8 27 2			Comparative genomics: Search single species RefSeq proteins at NCBI H. sapiens M. musculus D. rerio C. intestinalis S. purpuratus D. melanogaster C. elegans A. thaliana S. cerevisiae E. coli W3110 A. pernix K1 Search summary Figure data Additional searches of RefSeq proteins at NCBI All Eukaryotes Bacteria Archaea Viruses Primates Mammals Vertebrates
Related human proteins: Protein Relative score Description Self-match 1.000 adaptor-related protein complex 1 beta 1 subunit iso... AP1B1 0.987 adaptor-related protein complex 1 beta 1 subunit iso... AP2B1 0.841 adaptor-related protein complex 2, beta 1 subunit is... AP2B1 0.838 adaptor-related protein complex 2, beta 1 subunit iso... AP4B1 0.148 adaptor-related protein complex 4, beta 1 subunit [... AP3B2 0.138 adaptor-related protein complex 3, beta 2 subunit [H... AP3B1 0.137 adaptor-related protein complex 3, beta 1 subunit [H... AP2A2 0.039 adaptor-related protein complex 2, alpha 2 subunit [... AP2A1 0.039 adaptor-related protein complex 2, alpha 1 subunit i... AP2A1 0.038 adaptor-related protein complex 2, alpha 1 subunit i... AP3D1 0.036 adaptor-related protein complex 3, delta 1 subunit ... AP1G1 0.036 adaptor-related protein complex 1, gamma 1 subunit i... AP1G1 0.036 adaptor-related protein complex 1, gamma 1 subunit i... COPB1 0.033 coatomer protein complex, subunit beta 1 COPB1 0.033 coatomer protein complex, subunit beta 1 COPB1 0.033 coatomer protein complex, subunit beta 1 COPG 0.023 coatomer protein complex, subunit gamma 1 AP4E1 0.023 adaptor-related protein complex 4, epsilon 1 subunit... COPG2 0.023 coatomer protein complex, subunit gamma 2 AP1G2 0.018 adaptor-related protein complex 1, gamma 2 subunit [H... AP3D1 0.015 adaptor-related protein complex 3, delta 1 subunit ... SHANK1 0.007 SH3 and multiple ankyrin repeat domains 1 SPAG6 0.007 sperm associated antigen 6 isoform 1 TPR 0.006 nuclear pore complex-associated protein TPR MLL2 0.006 myeloid/lymphoid or mixed-lineage leukemia 2 NCAPD3 0.006 non-SMC condensin II complex, subunit D3 MAGEE1 0.005 melanoma antigen family E, 1 TSC22D2 0.005 TSC22 domain family, member 2 MMP9 0.005 matrix metalloproteinase 9 preproprotein SPAG6 0.005 sperm associated antigen 6 isoform 2 Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.