Guide to the Human Genome
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Name: BTBD11 Sequence: fasta or formatted (641aa) NCBI GI: 62953116
Description:

BTB (POZ) domain containing 11 isoform b

Referenced in:

Additional Interaction Domain Families

Other entries for this name:
alt prot [1104aa] BTB (POZ) domain containing 11 isoform a
Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             7.6         49           3
 C cysteine            2.3         15           1
 D aspartate           4.5         29           2
 E glutamate           7.2         46           3
 F phenylalanine       3.7         24           2
 G glycine             5.9         38           2
 H histidine           3.3         21           1
 I isoleucine          5.1         33           2
 K lysine              5.1         33           1
 L leucine            12.2         78           3
 M methionine          2.8         18           2
 N asparagine          3.3         21           2
 P proline             5.1         33           3
 Q glutamine           4.7         30           2
 R arginine            5.6         36           2
 S serine              6.7         43           3
 T threonine           4.7         30           2
 V valine              6.2         40           2
 W tryptophan          0.6          4           1
 Y tyrosine            3.1         20           2
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   BTB (POZ) domain containing 11 isoform b 
BTBD11                0.948   BTB (POZ) domain containing 11 isoform a 
ABTB2                 0.591   ankyrin repeat and BTB (POZ) domain containing 2 [Ho...
ANKHD1                0.037   ankyrin repeat and KH domain containing 1 isoform 3 ...
ANKHD1                0.037   ankyrin repeat and KH domain containing 1 isoform 2 ...
ANKHD1                0.037   ankyrin repeat and KH domain containing 1 isoform 1 ...
ANKHD1-EIF4EBP3       0.037   ANKHD1-EIF4EBP3 protein 
ANKRD17               0.036   ankyrin repeat domain protein 17 isoform a 
ANKRD17               0.036   ankyrin repeat domain protein 17 isoform b 
RCBTB2                0.035   regulator of chromosome condensation and BTB domain c...
KBTBD2                0.034   kelch repeat and BTB (POZ) domain containing 2 [Hom...
KLHL28                0.032   BTB (POZ) domain containing 5 
ANKRD50               0.030   ankyrin repeat domain 50 
ANKRA2                0.029   ankyrin repeat, family A (RFXANK-like), 2 
RIPK4                 0.029   ankyrin repeat domain 3 
ANKS6                 0.029   ankyrin repeat and sterile alpha motif domain contai...
NFKBIL2               0.029   NF-kappa-B inhibitor-like protein 2 
TANC2                 0.029   tetratricopeptide repeat, ankyrin repeat and coiled...
KLHL13                0.028   kelch-like 13 
TANC1                 0.028   tetratricopeptide repeat, ankyrin repeat and coiled...
TANC1                 0.028   tetratricopeptide repeat, ankyrin repeat and coiled...
KBTBD4                0.028   kelch repeat and BTB (POZ) domain containing 4 isof...
KBTBD4                0.028   kelch repeat and BTB (POZ) domain containing 4 isof...
ANKRD11               0.027   ankyrin repeat domain 11 
ANKMY2                0.027   ankyrin repeat and MYND domain containing 2 
KLHL20                0.027   kelch-like 20 
ASB2                  0.027   ankyrin repeat and SOCS box-containing protein 2 [Ho...
ANKRD12               0.026   ankyrin repeat domain 12 isoform 2 
ANKRD12               0.026   ankyrin repeat domain 12 isoform 1 
KLHL5                 0.026   kelch-like 5 isoform 3 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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