Guide to the Human Genome
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Name: KLHL20 Sequence: fasta or formatted (609aa) NCBI GI: 40807500
Description:

kelch-like 20

Referenced in:

Kelch Family

Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             6.2         38           2
 C cysteine            2.8         17           2
 D aspartate           5.3         32           2
 E glutamate           6.6         40           2
 F phenylalanine       2.5         15           1
 G glycine             8.0         49           3
 H histidine           1.8         11           1
 I isoleucine          4.1         25           2
 K lysine              3.3         20           2
 L leucine             9.2         56           3
 M methionine          3.1         19           1
 N asparagine          3.8         23           1
 P proline             5.3         32           1
 Q glutamine           4.1         25           1
 R arginine            8.0         49           2
 S serine              6.6         40           2
 T threonine           5.6         34           2
 V valine              9.0         55           2
 W tryptophan          1.5          9           1
 Y tyrosine            3.3         20           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   kelch-like 20 
KLHL17                0.425   kelch-like 17 
KLHL5                 0.398   kelch-like 5 isoform 3 
KLHL5                 0.398   kelch-like 5 isoform 1 
KLHL1                 0.387   kelch-like 1 protein 
KLHL12                0.379   kelch-like 12 
KLHL5                 0.373   kelch-like 5 isoform 2 
KLHL2                 0.365   kelch-like 2, Mayven isoform 2 
KLHL2                 0.365   kelch-like 2, Mayven isoform 1 
KLHL3                 0.365   kelch-like 3 
KLHL4                 0.363   kelch-like 4 isoform 1 
KLHL8                 0.358   kelch-like 8 
KLHL4                 0.357   kelch-like 4 isoform 2 
KLHL18                0.357   kelch-like 18 
KLHL28                0.347   BTB (POZ) domain containing 5 
KLHL2                 0.319   kelch-like 2, Mayven isoform 3 
KEAP1                 0.303   kelch-like ECH-associated protein 1 
KEAP1                 0.303   kelch-like ECH-associated protein 1 
IPP                   0.294   intracisternal A particle-promoted polypeptide isofor...
KLHL10                0.283   kelch-like 10 
IPP                   0.279   intracisternal A particle-promoted polypeptide isof...
KLHL24                0.238   DRE1 protein 
KLHL7                 0.226   kelch-like 7 isoform 1 
KLHL7                 0.219   kelch-like 7 isoform 2 
KLHL25                0.215   BTB/POZ KELCH domain protein 
KLHL9                 0.212   kelch-like 9 
KLHL13                0.212   kelch-like 13 
KLHL6                 0.212   kelch-like 6 
KLHL21                0.205   kelch-like 21 
KLHL26                0.204   kelch-like 26 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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