Guide to the Human Genome
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Name: KLHL28 Sequence: fasta or formatted (571aa) NCBI GI: 44680141
Description:

BTB (POZ) domain containing 5

Referenced in:

Kelch Family
Additional Interaction Domain Families

Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             6.8         39           3
 C cysteine            3.3         19           2
 D aspartate           4.7         27           2
 E glutamate           6.3         36           2
 F phenylalanine       3.5         20           2
 G glycine             6.5         37           2
 H histidine           3.5         20           2
 I isoleucine          5.1         29           2
 K lysine              4.0         23           1
 L leucine            10.7         61           2
 M methionine          2.6         15           1
 N asparagine          4.4         25           1
 P proline             3.9         22           1
 Q glutamine           3.9         22           1
 R arginine            4.4         25           1
 S serine              6.5         37           2
 T threonine           5.6         32           3
 V valine              8.1         46           3
 W tryptophan          1.4          8           1
 Y tyrosine            4.9         28           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   BTB (POZ) domain containing 5 
KLHL20                0.366   kelch-like 20 
KLHL5                 0.344   kelch-like 5 isoform 3 
KLHL5                 0.344   kelch-like 5 isoform 1 
KLHL17                0.343   kelch-like 17 
KLHL1                 0.340   kelch-like 1 protein 
KLHL4                 0.331   kelch-like 4 isoform 2 
KLHL4                 0.330   kelch-like 4 isoform 1 
KLHL18                0.319   kelch-like 18 
KLHL5                 0.319   kelch-like 5 isoform 2 
KLHL3                 0.315   kelch-like 3 
KLHL12                0.312   kelch-like 12 
KLHL2                 0.309   kelch-like 2, Mayven isoform 2 
KLHL2                 0.309   kelch-like 2, Mayven isoform 1 
KEAP1                 0.285   kelch-like ECH-associated protein 1 
KEAP1                 0.285   kelch-like ECH-associated protein 1 
KLHL8                 0.285   kelch-like 8 
KLHL2                 0.267   kelch-like 2, Mayven isoform 3 
KLHL10                0.251   kelch-like 10 
IPP                   0.242   intracisternal A particle-promoted polypeptide isofor...
IPP                   0.224   intracisternal A particle-promoted polypeptide isof...
KLHL7                 0.218   kelch-like 7 isoform 1 
KLHL7                 0.214   kelch-like 7 isoform 2 
KLHL9                 0.212   kelch-like 9 
KLHL13                0.210   kelch-like 13 
KLHL31                0.210   kelch repeat and BTB (POZ) domain containing 1 [Homo...
KLHL24                0.207   DRE1 protein 
ENC1                  0.194   ectodermal-neural cortex (with BTB-like domain) [Homo...
KLHL29                0.193   PREDICTED: kelch-like 29 (Drosophila) 
KLHL29                0.193   PREDICTED: kelch repeat and BTB (POZ) domain contai...
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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