Guide to the Human Genome
Home | Table of Contents | Search text | Search genes | Search sequences | Purchase | FAQ | Blog | Help
Name: KLHL13 Sequence: fasta or formatted (655aa) NCBI GI: 45643138
Description:

kelch-like 13

Referenced in:

Kelch Family

Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             5.5         36           2
 C cysteine            2.1         14           1
 D aspartate           5.6         37           2
 E glutamate           5.3         35           3
 F phenylalanine       4.6         30           2
 G glycine             6.4         42           2
 H histidine           2.4         16           1
 I isoleucine          3.7         24           2
 K lysine              5.5         36           1
 L leucine            10.2         67           3
 M methionine          4.3         28           2
 N asparagine          3.8         25           2
 P proline             5.3         35           2
 Q glutamine           3.4         22           2
 R arginine            4.4         29           1
 S serine              7.0         46           2
 T threonine           6.9         45           2
 V valine              7.8         51           2
 W tryptophan          1.5         10           1
 Y tyrosine            4.1         27           2
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   kelch-like 13 
KLHL9                 0.878   kelch-like 9 
KLHL26                0.339   kelch-like 26 
KLHL36                0.300   kelch-like 36 
KLHL31                0.269   kelch repeat and BTB (POZ) domain containing 1 [Homo...
KLHL14                0.251   kelch-like 14 
KLHL32                0.241   kelch-like 32 
KLHL22                0.240   kelch-like 
KLHL15                0.217   kelch-like 15 
KLHL5                 0.209   kelch-like 5 isoform 3 
KLHL5                 0.209   kelch-like 5 isoform 1 
KLHL20                0.196   kelch-like 20 
KLHL5                 0.195   kelch-like 5 isoform 2 
KLHL34                0.191   kelch-like 34 
KLHL4                 0.188   kelch-like 4 isoform 1 
KLHL18                0.186   kelch-like 18 
KLHL3                 0.185   kelch-like 3 
KLHL1                 0.184   kelch-like 1 protein 
KLHL4                 0.183   kelch-like 4 isoform 2 
KLHL28                0.183   BTB (POZ) domain containing 5 
KLHL2                 0.179   kelch-like 2, Mayven isoform 2 
KLHL2                 0.179   kelch-like 2, Mayven isoform 1 
KLHL17                0.174   kelch-like 17 
KLHL12                0.169   kelch-like 12 
KLHL10                0.165   kelch-like 10 
KEAP1                 0.159   kelch-like ECH-associated protein 1 
KEAP1                 0.159   kelch-like ECH-associated protein 1 
KLHL2                 0.149   kelch-like 2, Mayven isoform 3 
KLHL24                0.149   DRE1 protein 
KLHL6                 0.147   kelch-like 6 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


Home | Table of Contents | Search text | Search genes | Search sequences | Purchase | FAQ | Blog | Help

Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

CSHL Press