Guide to the Human Genome
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Name: WARS Sequence: fasta or formatted (471aa) NCBI GI: 47419914
Description:

tryptophanyl-tRNA synthetase isoform a

Referenced in:

Interferon
tRNA Enzymes

Other entries for this name:
alt mRNA [471aa] tryptophanyl-tRNA synthetase isoform a
alt prot [430aa] tryptophanyl-tRNA synthetase isoform b
alt prot [430aa] tryptophanyl-tRNA synthetase isoform b
Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             7.4         35           3
 C cysteine            1.3          6           1
 D aspartate           8.3         39           3
 E glutamate           5.1         24           2
 F phenylalanine       7.0         33           2
 G glycine             5.5         26           2
 H histidine           2.3         11           2
 I isoleucine          6.8         32           2
 K lysine              7.4         35           2
 L leucine             7.0         33           2
 M methionine          2.8         13           1
 N asparagine          3.6         17           1
 P proline             5.3         25           2
 Q glutamine           4.5         21           1
 R arginine            4.2         20           2
 S serine              7.2         34           2
 T threonine           5.5         26           1
 V valine              4.9         23           2
 W tryptophan          0.6          3           1
 Y tyrosine            3.2         15           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   tryptophanyl-tRNA synthetase isoform a 
WARS                  1.000   tryptophanyl-tRNA synthetase isoform a 
WARS                  0.918   tryptophanyl-tRNA synthetase isoform b 
WARS                  0.918   tryptophanyl-tRNA synthetase isoform b 
LOC341112             0.206   PREDICTED: similar to hCG40922 
LOC341112             0.203   PREDICTED: similar to hCG40922 
EPRS                  0.040   glutamyl-prolyl tRNA synthetase 
YARS                  0.015   tyrosyl-tRNA synthetase 
MARS                  0.014   methionyl-tRNA synthetase 
TACC3                 0.008   transforming, acidic coiled-coil containing protein 3...
AATK                  0.005   apoptosis-associated tyrosine kinase 
FMNL1                 0.004   formin-like 1 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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