Guide to the Human Genome
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Name: EEF1E1 Sequence: fasta or formatted (139aa) NCBI GI: 208879470
Description:

eukaryotic translation elongation factor 1 epsilon 1 isoform 2

Referenced in:

Small RNAs in RNA Processing
tRNA Enzymes

Other entries for this name:
alt prot [174aa] eukaryotic translation elongation factor 1 epsilon 1 isoform 1
Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             7.9         11           4
 C cysteine            0.0          0           0
 D aspartate           3.6          5           1
 E glutamate           6.5          9           2
 F phenylalanine       1.4          2           1
 G glycine             7.2         10           1
 H histidine           3.6          5           1
 I isoleucine          5.0          7           2
 K lysine              7.2         10           1
 L leucine            15.8         22           2
 M methionine          0.7          1           1
 N asparagine          5.8          8           2
 P proline             1.4          2           1
 Q glutamine           5.0          7           2
 R arginine            3.6          5           1
 S serine              6.5          9           2
 T threonine           7.2         10           2
 V valine              5.0          7           1
 W tryptophan          0.7          1           1
 Y tyrosine            5.8          8           2
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   eukaryotic translation elongation factor 1 epsilon ... 
EEF1E1                0.916   eukaryotic translation elongation factor 1 epsilon 1 ...
EPRS                  0.068   glutamyl-prolyl tRNA synthetase 
EEF1G                 0.036   eukaryotic translation elongation factor 1 gamma [Hom...
AIMP2                 0.020   aminoacyl tRNA synthetase complex-interacting multif...
MARS                  0.012   methionyl-tRNA synthetase 
TRIM46                0.012   tripartite motif-containing 46 
PRICKLE4              0.012   over-expressed breast tumor protein 
EEF1B2                0.012   eukaryotic translation elongation factor 1 beta 2 [H...
EEF1B2                0.012   eukaryotic translation elongation factor 1 beta 2 [Ho...
EEF1B2                0.012   eukaryotic translation elongation factor 1 beta 2 [H...
HDLBP                 0.008   high density lipoprotein binding protein 
HDLBP                 0.008   high density lipoprotein binding protein 
LOC284890             0.008   PREDICTED: similar to Glutathione S-transferase the...
XPO4                  0.008   exportin 4 
BCL2L14               0.008   BCL2-like 14 isoform 1 
BCL2L14               0.008   BCL2-like 14 isoform 1 
BCL2L14               0.008   BCL2-like 14 isoform 2 
NARG1L                0.008   NMDA receptor regulated 1-like protein isoform 1 [Ho...
GSTCD                 0.008   glutathione S-transferase, C-terminal domain contai...
GSTCD                 0.008   glutathione S-transferase, C-terminal domain contai...
C5orf36               0.004   hypothetical protein LOC285600 isoform 1 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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