Home |
Table of Contents |
Search text |
Search genes |
Search sequences |
Purchase |
FAQ |
Blog |
Help
Search of human proteins with 62241026
BLASTP 2.2.11 [Jun-05-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= gi|62241026 doublesex and mab-3 related transcription factor 1
[Homo sapiens]
(373 letters)
Database: hs.faa
37,866 sequences; 18,247,518 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|62241026 doublesex and mab-3 related transcription factor 1 [... 767 0.0
gi|170763515 DMRT-like family A1 [Homo sapiens] 125 6e-29
gi|154146231 DMRT-like family A2 [Homo sapiens] 124 1e-28
gi|195947401 doublesex and mab-3 related transcription factor 2 ... 122 5e-28
gi|5729806 doublesex and mab-3 related transcription factor 2 is... 122 5e-28
gi|153945850 doublesex and mab-3 related transcription factor 2 ... 122 5e-28
gi|11056048 doublesex and mab-3 related transcription factor 3 [... 100 4e-21
gi|24308352 DMRT-like family B with proline-rich C-terminal, 1 [... 87 3e-17
gi|94536830 DMRT-like family C2 [Homo sapiens] 86 7e-17
gi|22748877 basic helix-loop-helix domain containing, class B, 5... 42 9e-04
gi|195972866 keratin 10 [Homo sapiens] 40 0.003
gi|34452713 Ca2+-dependent secretion activator isoform 2 [Homo s... 40 0.003
gi|34452715 Ca2+-dependent secretion activator isoform 1 [Homo s... 40 0.003
gi|34452711 Ca2+-dependent secretion activator isoform 3 [Homo s... 40 0.003
gi|221139926 NHS-like 1 [Homo sapiens] 40 0.004
gi|73427806 v-maf musculoaponeurotic fibrosarcoma oncogene homol... 40 0.004
gi|5453736 v-maf musculoaponeurotic fibrosarcoma oncogene homolo... 40 0.004
gi|30061556 SRY (sex determining region Y)-box 3 [Homo sapiens] 39 0.008
gi|238859557 regulatory factor X1 [Homo sapiens] 38 0.013
gi|49574532 glycogen synthase kinase 3 alpha [Homo sapiens] 38 0.013
gi|24586686 voltage-dependent calcium channel gamma-8 subunit [H... 38 0.013
gi|55956899 keratin 9 [Homo sapiens] 38 0.017
gi|19923343 Cbp/p300-interacting transactivator, with Glu/Asp-ri... 38 0.017
gi|47132620 keratin 2 [Homo sapiens] 38 0.017
gi|40068464 AT rich interactive domain 1B (SWI1-like) isoform 2 ... 38 0.017
gi|40068466 AT rich interactive domain 1B (SWI1-like) isoform 1 ... 38 0.017
gi|40068462 AT rich interactive domain 1B (SWI1-like) isoform 3 ... 38 0.017
gi|51479192 ring finger protein 1 [Homo sapiens] 37 0.022
gi|4501957 alpha-1D-adrenergic receptor [Homo sapiens] 37 0.022
gi|46519154 ankyrin repeat and KH domain containing 1 isoform 3 ... 37 0.022
>gi|62241026 doublesex and mab-3 related transcription factor 1
[Homo sapiens]
Length = 373
Score = 767 bits (1980), Expect = 0.0
Identities = 373/373 (100%), Positives = 373/373 (100%)
Query: 1 MPNDEAFSKPSTPSEAPHAPGVPPQGRAGGFGKASGALVGAASGSSAGGSSRGGGSGSGA 60
MPNDEAFSKPSTPSEAPHAPGVPPQGRAGGFGKASGALVGAASGSSAGGSSRGGGSGSGA
Sbjct: 1 MPNDEAFSKPSTPSEAPHAPGVPPQGRAGGFGKASGALVGAASGSSAGGSSRGGGSGSGA 60
Query: 61 SDLGAGSKKSPRLPKCARCRNHGYASPLKGHKRFCMWRDCQCKKCNLIAERQRVMAAQVA 120
SDLGAGSKKSPRLPKCARCRNHGYASPLKGHKRFCMWRDCQCKKCNLIAERQRVMAAQVA
Sbjct: 61 SDLGAGSKKSPRLPKCARCRNHGYASPLKGHKRFCMWRDCQCKKCNLIAERQRVMAAQVA 120
Query: 121 LRRQQAQEEELGISHPIPLPSAAELLVKRENNGSNPCLMTECSGTSQPPPASVPTTAASE 180
LRRQQAQEEELGISHPIPLPSAAELLVKRENNGSNPCLMTECSGTSQPPPASVPTTAASE
Sbjct: 121 LRRQQAQEEELGISHPIPLPSAAELLVKRENNGSNPCLMTECSGTSQPPPASVPTTAASE 180
Query: 181 GRMVIQDIPAVTSRGHVENTPDLVSDSTYYSSFYQPSLFPYYNNLYNCPQYSMALAADSA 240
GRMVIQDIPAVTSRGHVENTPDLVSDSTYYSSFYQPSLFPYYNNLYNCPQYSMALAADSA
Sbjct: 181 GRMVIQDIPAVTSRGHVENTPDLVSDSTYYSSFYQPSLFPYYNNLYNCPQYSMALAADSA 240
Query: 241 SGEVGNPLGGSPVKNSLRGLPGPYVPGQTGNQWQMKNMENRHAMSSQYRMHSYYPPPSYL 300
SGEVGNPLGGSPVKNSLRGLPGPYVPGQTGNQWQMKNMENRHAMSSQYRMHSYYPPPSYL
Sbjct: 241 SGEVGNPLGGSPVKNSLRGLPGPYVPGQTGNQWQMKNMENRHAMSSQYRMHSYYPPPSYL 300
Query: 301 GQSVPQFFTFEDAPSYPEARASVFSPPSSQDSGLVSLSSSSPISNKSTKAVLECEPASEP 360
GQSVPQFFTFEDAPSYPEARASVFSPPSSQDSGLVSLSSSSPISNKSTKAVLECEPASEP
Sbjct: 301 GQSVPQFFTFEDAPSYPEARASVFSPPSSQDSGLVSLSSSSPISNKSTKAVLECEPASEP 360
Query: 361 SSFTVTPVIEEDE 373
SSFTVTPVIEEDE
Sbjct: 361 SSFTVTPVIEEDE 373
>gi|170763515 DMRT-like family A1 [Homo sapiens]
Length = 504
Score = 125 bits (314), Expect = 6e-29
Identities = 63/96 (65%), Positives = 67/96 (69%), Gaps = 3/96 (3%)
Query: 34 ASGALVGAASGSSAGGSSRGGGSGSGASDLGAGSKKSPRLPKCARCRNHGYASPLKGHKR 93
A+ A AA+ S +GG G SG +G G PR PKCARCRNHG S LKGHKR
Sbjct: 58 AAAAAAAAAATSGSGGCPPAPGLESGVGAVGCGY---PRTPKCARCRNHGVVSALKGHKR 114
Query: 94 FCMWRDCQCKKCNLIAERQRVMAAQVALRRQQAQEE 129
FC WRDC C KC LIAERQRVMAAQVALRRQQAQEE
Sbjct: 115 FCRWRDCACAKCTLIAERQRVMAAQVALRRQQAQEE 150
>gi|154146231 DMRT-like family A2 [Homo sapiens]
Length = 542
Score = 124 bits (312), Expect = 1e-28
Identities = 65/119 (54%), Positives = 74/119 (62%), Gaps = 3/119 (2%)
Query: 14 SEAPHAPGVPPQGRAGGFGKASGALVGAASGSSAGGS---SRGGGSGSGASDLGAGSKKS 70
SE P PG A G ++ A+ ++A S S GG G L ++K
Sbjct: 5 SELPSVPGAATAAAATATGPPVASVASVAAAAAAAASLPVSVAGGLLRGPPLLLRAAEKY 64
Query: 71 PRLPKCARCRNHGYASPLKGHKRFCMWRDCQCKKCNLIAERQRVMAAQVALRRQQAQEE 129
PR PKCARCRNHG S LKGHKR+C W+DC C KC LIAERQRVMAAQVALRRQQAQEE
Sbjct: 65 PRTPKCARCRNHGVVSALKGHKRYCRWKDCLCAKCTLIAERQRVMAAQVALRRQQAQEE 123
>gi|195947401 doublesex and mab-3 related transcription factor 2
isoform 1 [Homo sapiens]
Length = 226
Score = 122 bits (306), Expect = 5e-28
Identities = 66/131 (50%), Positives = 77/131 (58%), Gaps = 5/131 (3%)
Query: 4 DEAFSKPSTPSEAPHAPGVPPQGRAGGFGKASGALVGAASGSSAGGSSRGGGSGSGASDL 63
DE + EA +PG+P Q G + L AS + G R +G GA
Sbjct: 56 DEDAEEEGDGEEAGASPGMPGQPEQRGGPQPRPPLAPQASPAGTGPRERCTPAGGGAEP- 114
Query: 64 GAGSKKSPRLPKCARCRNHGYASPLKGHKRFCMWRDCQCKKCNLIAERQRVMAAQVALRR 123
+K R PKCARCRNHG S LKGHKRFC WRDCQC C L+ ERQRVMAAQVALRR
Sbjct: 115 ----RKLSRTPKCARCRNHGVVSCLKGHKRFCRWRDCQCANCLLVVERQRVMAAQVALRR 170
Query: 124 QQAQEEELGIS 134
QQA E++ G+S
Sbjct: 171 QQATEDKKGLS 181
>gi|5729806 doublesex and mab-3 related transcription factor 2
isoform 1 [Homo sapiens]
Length = 226
Score = 122 bits (306), Expect = 5e-28
Identities = 66/131 (50%), Positives = 77/131 (58%), Gaps = 5/131 (3%)
Query: 4 DEAFSKPSTPSEAPHAPGVPPQGRAGGFGKASGALVGAASGSSAGGSSRGGGSGSGASDL 63
DE + EA +PG+P Q G + L AS + G R +G GA
Sbjct: 56 DEDAEEEGDGEEAGASPGMPGQPEQRGGPQPRPPLAPQASPAGTGPRERCTPAGGGAEP- 114
Query: 64 GAGSKKSPRLPKCARCRNHGYASPLKGHKRFCMWRDCQCKKCNLIAERQRVMAAQVALRR 123
+K R PKCARCRNHG S LKGHKRFC WRDCQC C L+ ERQRVMAAQVALRR
Sbjct: 115 ----RKLSRTPKCARCRNHGVVSCLKGHKRFCRWRDCQCANCLLVVERQRVMAAQVALRR 170
Query: 124 QQAQEEELGIS 134
QQA E++ G+S
Sbjct: 171 QQATEDKKGLS 181
>gi|153945850 doublesex and mab-3 related transcription factor 2
isoform 2 [Homo sapiens]
Length = 561
Score = 122 bits (306), Expect = 5e-28
Identities = 66/131 (50%), Positives = 77/131 (58%), Gaps = 5/131 (3%)
Query: 4 DEAFSKPSTPSEAPHAPGVPPQGRAGGFGKASGALVGAASGSSAGGSSRGGGSGSGASDL 63
DE + EA +PG+P Q G + L AS + G R +G GA
Sbjct: 56 DEDAEEEGDGEEAGASPGMPGQPEQRGGPQPRPPLAPQASPAGTGPRERCTPAGGGAEP- 114
Query: 64 GAGSKKSPRLPKCARCRNHGYASPLKGHKRFCMWRDCQCKKCNLIAERQRVMAAQVALRR 123
+K R PKCARCRNHG S LKGHKRFC WRDCQC C L+ ERQRVMAAQVALRR
Sbjct: 115 ----RKLSRTPKCARCRNHGVVSCLKGHKRFCRWRDCQCANCLLVVERQRVMAAQVALRR 170
Query: 124 QQAQEEELGIS 134
QQA E++ G+S
Sbjct: 171 QQATEDKKGLS 181
>gi|11056048 doublesex and mab-3 related transcription factor 3
[Homo sapiens]
Length = 472
Score = 99.8 bits (247), Expect = 4e-21
Identities = 54/104 (51%), Positives = 63/104 (60%), Gaps = 12/104 (11%)
Query: 72 RLPKCARCRNHGYASPLKGHKRFCMWRDCQCKKCNLIAERQRVMAAQVALRRQQAQEEEL 131
R PKCARCRNHG S LKGHKR+C ++DC C+KC LI ERQRVMAAQVALRRQQA E
Sbjct: 25 RTPKCARCRNHGVLSWLKGHKRYCRFKDCTCEKCILIIERQRVMAAQVALRRQQANESLE 84
Query: 132 GISHPIPLPSAAELLVKRENNGSNPCLMTECSGTSQPPPASVPT 175
+ +P + L P + QPPPAS P+
Sbjct: 85 SL-----IPDSLRAL-------PGPPPPGDAVAAPQPPPASQPS 116
>gi|24308352 DMRT-like family B with proline-rich C-terminal, 1
[Homo sapiens]
Length = 342
Score = 86.7 bits (213), Expect = 3e-17
Identities = 46/111 (41%), Positives = 60/111 (54%), Gaps = 20/111 (18%)
Query: 69 KSPRLPKCARCRNHGYASPLKGHKRFCMWRDCQCKKCNLIAERQRVMAAQVALRRQQAQE 128
K R PKC+RCRNHG+ P+KGH C W+ C C+KC LI+ERQ++MAAQ L+ Q A+E
Sbjct: 4 KMVRTPKCSRCRNHGFLVPVKGHAGKCRWKQCLCEKCYLISERQKIMAAQKVLKTQAAEE 63
Query: 129 EELGISHPIPLPSAAELLVKRENNGSNPCLMTECSGTSQPPPASVPTTAAS 179
E+ A L + + SG + PA VP AAS
Sbjct: 64 EQ-----------EAALCAQGPK---------QASGAAAAAPAPVPVPAAS 94
>gi|94536830 DMRT-like family C2 [Homo sapiens]
Length = 367
Score = 85.5 bits (210), Expect = 7e-17
Identities = 38/54 (70%), Positives = 44/54 (81%)
Query: 72 RLPKCARCRNHGYASPLKGHKRFCMWRDCQCKKCNLIAERQRVMAAQVALRRQQ 125
R P CARCRNHG + LKGHKR C+++ C+C KC LI ER+RVMAAQVALRRQQ
Sbjct: 38 RSPTCARCRNHGVTAHLKGHKRLCLFQACECHKCVLILERRRVMAAQVALRRQQ 91
>gi|22748877 basic helix-loop-helix domain containing, class B, 5
[Homo sapiens]
Length = 381
Score = 42.0 bits (97), Expect = 9e-04
Identities = 23/49 (46%), Positives = 27/49 (55%), Gaps = 6/49 (12%)
Query: 22 VPPQGRAGGFGKASGALVGAASGSSAGGSSRGGGSGSGASDLGAGSKKS 70
VPP G GG G G++SGSS GG G GSG +S + SKKS
Sbjct: 195 VPPGGLGGGGGG------GSSSGSSGGGGGSGSGSGGSSSSSSSSSKKS 237
Score = 34.7 bits (78), Expect = 0.14
Identities = 19/42 (45%), Positives = 22/42 (52%), Gaps = 1/42 (2%)
Query: 29 GGFGKASGALVGAASGSSAGGSSRGGGSGSGASDLGAGSKKS 70
GG G L G G S+ GSS GGG GSG+ G+ S S
Sbjct: 191 GGASVPPGGLGGGGGGGSSSGSS-GGGGGSGSGSGGSSSSSS 231
>gi|195972866 keratin 10 [Homo sapiens]
Length = 584
Score = 40.0 bits (92), Expect = 0.003
Identities = 25/67 (37%), Positives = 29/67 (43%), Gaps = 9/67 (13%)
Query: 26 GRAGGFGKASGALVGAASGSSAGGSSRGGGSGSGASDLGAGSKKSPRLPKCARCRNHGYA 85
G G G +SG G++SG GGSS GGG G G G GS +G
Sbjct: 510 GGGYGGGSSSGGHGGSSSGGYGGGSSGGGGGGYGGGSSGGGSSSG---------GGYGGG 560
Query: 86 SPLKGHK 92
S GHK
Sbjct: 561 SSSGGHK 567
Score = 39.7 bits (91), Expect = 0.004
Identities = 21/45 (46%), Positives = 24/45 (53%), Gaps = 3/45 (6%)
Query: 26 GRAGGFGKASGALVGAASGSSAGGSSRGGGSGSGASDLGAGSKKS 70
G GG G +SG G G S+GG S GGG G G+S G G S
Sbjct: 486 GHGGGHGGSSG---GGYGGGSSGGGSSGGGYGGGSSSGGHGGSSS 527
Score = 38.9 bits (89), Expect = 0.008
Identities = 17/42 (40%), Positives = 22/42 (52%)
Query: 25 QGRAGGFGKASGALVGAASGSSAGGSSRGGGSGSGASDLGAG 66
+G +GG G+ G+ G G S+GG S GGG G G G
Sbjct: 456 EGSSGGGGRGGGSFGGGYGGGSSGGGSSGGGHGGGHGGSSGG 497
Score = 38.1 bits (87), Expect = 0.013
Identities = 18/47 (38%), Positives = 23/47 (48%)
Query: 26 GRAGGFGKASGALVGAASGSSAGGSSRGGGSGSGASDLGAGSKKSPR 72
G GG+G S ++ G GGSS GG S + +G S K PR
Sbjct: 537 GGGGGYGGGSSGGGSSSGGGYGGGSSSGGHKSSSSGSVGESSSKGPR 583
Score = 37.7 bits (86), Expect = 0.017
Identities = 22/45 (48%), Positives = 25/45 (55%), Gaps = 2/45 (4%)
Query: 28 AGGFGKAS--GALVGAASGSSAGGSSRGGGSGSGASDLGAGSKKS 70
+GG+G S G G GSS GGSS GGG G G+S G S S
Sbjct: 527 SGGYGGGSSGGGGGGYGGGSSGGGSSSGGGYGGGSSSGGHKSSSS 571
Score = 32.7 bits (73), Expect = 0.54
Identities = 18/45 (40%), Positives = 21/45 (46%)
Query: 26 GRAGGFGKASGALVGAASGSSAGGSSRGGGSGSGASDLGAGSKKS 70
G G +SG G G S+GG GG SG G+S G G S
Sbjct: 474 GGGSSGGGSSGGGHGGGHGGSSGGGYGGGSSGGGSSGGGYGGGSS 518
Score = 32.3 bits (72), Expect = 0.71
Identities = 18/46 (39%), Positives = 21/46 (45%), Gaps = 4/46 (8%)
Query: 26 GRAGGFGKASGALVGAASGSSAGGSSRG----GGSGSGASDLGAGS 67
G + G G + G G +S GGSS G G SG G G GS
Sbjct: 501 GGSSGGGSSGGGYGGGSSSGGHGGSSSGGYGGGSSGGGGGGYGGGS 546
Score = 31.6 bits (70), Expect = 1.2
Identities = 20/47 (42%), Positives = 22/47 (46%), Gaps = 6/47 (12%)
Query: 26 GRAGGFGKAS------GALVGAASGSSAGGSSRGGGSGSGASDLGAG 66
G GGFG S + G + G S GG S GGGS G S G G
Sbjct: 75 GGLGGFGGGSFRGSYGSSSFGGSYGGSFGGGSFGGGSFGGGSFGGGG 121
Score = 30.0 bits (66), Expect = 3.5
Identities = 16/41 (39%), Positives = 20/41 (48%)
Query: 26 GRAGGFGKASGALVGAASGSSAGGSSRGGGSGSGASDLGAG 66
G GG G S + ++ GS GG S GG SG S +G
Sbjct: 23 GGCGGGGGVSSLRISSSKGSLGGGFSSGGFSGGSFSRGSSG 63
Score = 30.0 bits (66), Expect = 3.5
Identities = 17/40 (42%), Positives = 21/40 (52%), Gaps = 2/40 (5%)
Query: 29 GGFGKAS--GALVGAASGSSAGGSSRGGGSGSGASDLGAG 66
G +G +S G+ G+ G S GG S GGGS G G G
Sbjct: 87 GSYGSSSFGGSYGGSFGGGSFGGGSFGGGSFGGGGFGGGG 126
Score = 29.6 bits (65), Expect = 4.6
Identities = 21/48 (43%), Positives = 24/48 (50%), Gaps = 8/48 (16%)
Query: 26 GRAGGF---GKASGALVGAASGSSAG---GSSRGGGSGSGASDLGAGS 67
GR GG G G+ G +SG G G S GGG G G+S G GS
Sbjct: 463 GRGGGSFGGGYGGGSSGGGSSGGGHGGGHGGSSGGGYGGGSS--GGGS 508
>gi|34452713 Ca2+-dependent secretion activator isoform 2 [Homo
sapiens]
Length = 1314
Score = 40.0 bits (92), Expect = 0.003
Identities = 26/69 (37%), Positives = 31/69 (44%), Gaps = 5/69 (7%)
Query: 11 STPSEAPHAPGVPPQGRAG-----GFGKASGALVGAASGSSAGGSSRGGGSGSGASDLGA 65
S PS A +P +G AG G G +GA VGA G +G SS GG G S
Sbjct: 26 SAPSGARLSPSRTSEGSAGSAGLGGGGAGAGAGVGAGGGGGSGASSGGGAGGLQPSSRAG 85
Query: 66 GSKKSPRLP 74
G + S P
Sbjct: 86 GGRPSSPSP 94
>gi|34452715 Ca2+-dependent secretion activator isoform 1 [Homo
sapiens]
Length = 1353
Score = 40.0 bits (92), Expect = 0.003
Identities = 26/69 (37%), Positives = 31/69 (44%), Gaps = 5/69 (7%)
Query: 11 STPSEAPHAPGVPPQGRAG-----GFGKASGALVGAASGSSAGGSSRGGGSGSGASDLGA 65
S PS A +P +G AG G G +GA VGA G +G SS GG G S
Sbjct: 26 SAPSGARLSPSRTSEGSAGSAGLGGGGAGAGAGVGAGGGGGSGASSGGGAGGLQPSSRAG 85
Query: 66 GSKKSPRLP 74
G + S P
Sbjct: 86 GGRPSSPSP 94
>gi|34452711 Ca2+-dependent secretion activator isoform 3 [Homo
sapiens]
Length = 1274
Score = 40.0 bits (92), Expect = 0.003
Identities = 26/69 (37%), Positives = 31/69 (44%), Gaps = 5/69 (7%)
Query: 11 STPSEAPHAPGVPPQGRAG-----GFGKASGALVGAASGSSAGGSSRGGGSGSGASDLGA 65
S PS A +P +G AG G G +GA VGA G +G SS GG G S
Sbjct: 26 SAPSGARLSPSRTSEGSAGSAGLGGGGAGAGAGVGAGGGGGSGASSGGGAGGLQPSSRAG 85
Query: 66 GSKKSPRLP 74
G + S P
Sbjct: 86 GGRPSSPSP 94
>gi|221139926 NHS-like 1 [Homo sapiens]
Length = 1606
Score = 39.7 bits (91), Expect = 0.004
Identities = 59/222 (26%), Positives = 86/222 (38%), Gaps = 20/222 (9%)
Query: 152 NGSNPCLMTECSGTSQP--PPASVPTTAASEGRMVIQDIPAVTSRGHVENTPDLVSDSTY 209
+GS+P + CS +P P + +T ++ M P V S TP S+
Sbjct: 716 SGSSPS-QSPCSDLEEPWLPRSRSQSTVSAGSSMTSATTPNVYSLCGA--TPSQSDTSSV 772
Query: 210 YSSFYQPSLFPYYNNLYNCPQYSMALAADSASGEVGNPLGGSPVKNSLRGLPG--PYVPG 267
S + P + YY + Y Q A S G P G PV++ G P VPG
Sbjct: 773 KSEYTDP--WGYYID-YTGMQEDPGNPAGGCSTSSGVPTGNGPVRHVQEGSRATMPQVPG 829
Query: 268 QTGNQWQMKNMENRHAM---SSQYRMHSYYPP-----PSYLGQSVPQFFTFEDAPSYPEA 319
+ ++ + E H + SS Y S P P +L P + P PE
Sbjct: 830 GSVKP-KIMSPEKSHRVISPSSGYSSQSNTPTALTPVPVFLKSVSPANGKGKPKPKVPER 888
Query: 320 RASVFSPPSSQDSGLVSLSSSSPISNKSTKAVLECEPASEPS 361
++S+ S S S SLSSS+ T L+ S P+
Sbjct: 889 KSSLISSVSISSSS-TSLSSSTSTEGSGTMKKLDPAVGSPPA 929
>gi|73427806 v-maf musculoaponeurotic fibrosarcoma oncogene homolog
isoform b [Homo sapiens]
Length = 373
Score = 39.7 bits (91), Expect = 0.004
Identities = 22/56 (39%), Positives = 25/56 (44%), Gaps = 2/56 (3%)
Query: 18 HAPGVPPQGRAGGFGKASGALVGAASG--SSAGGSSRGGGSGSGASDLGAGSKKSP 71
H P G AG ++G GA G +SAGG GGG G G GAG P
Sbjct: 193 HHPTAGAPGAAGSAAASAGGAGGAGGGGPASAGGGGGGGGGGGGGGAAGAGGALHP 248
Score = 29.3 bits (64), Expect = 6.0
Identities = 16/47 (34%), Positives = 19/47 (40%), Gaps = 1/47 (2%)
Query: 16 APHAPGVPPQGRAGGFGKASGALVGAASGSSAGGSSRGGG-SGSGAS 61
AP A G G G G A G GG GGG +G+G +
Sbjct: 199 APGAAGSAAASAGGAGGAGGGGPASAGGGGGGGGGGGGGGAAGAGGA 245
>gi|5453736 v-maf musculoaponeurotic fibrosarcoma oncogene homolog
isoform a [Homo sapiens]
Length = 403
Score = 39.7 bits (91), Expect = 0.004
Identities = 22/56 (39%), Positives = 25/56 (44%), Gaps = 2/56 (3%)
Query: 18 HAPGVPPQGRAGGFGKASGALVGAASG--SSAGGSSRGGGSGSGASDLGAGSKKSP 71
H P G AG ++G GA G +SAGG GGG G G GAG P
Sbjct: 193 HHPTAGAPGAAGSAAASAGGAGGAGGGGPASAGGGGGGGGGGGGGGAAGAGGALHP 248
Score = 29.3 bits (64), Expect = 6.0
Identities = 16/47 (34%), Positives = 19/47 (40%), Gaps = 1/47 (2%)
Query: 16 APHAPGVPPQGRAGGFGKASGALVGAASGSSAGGSSRGGG-SGSGAS 61
AP A G G G G A G GG GGG +G+G +
Sbjct: 199 APGAAGSAAASAGGAGGAGGGGPASAGGGGGGGGGGGGGGAAGAGGA 245
>gi|30061556 SRY (sex determining region Y)-box 3 [Homo sapiens]
Length = 446
Score = 38.9 bits (89), Expect = 0.008
Identities = 22/54 (40%), Positives = 31/54 (57%), Gaps = 1/54 (1%)
Query: 14 SEAPHAPGVPPQGRAGGFGKASGALVGAASGSSAGGSSRGGGSGSGASDLGAGS 67
+E + G P Q AG G A+ G +S ++AGG++ GGGS GAS G G+
Sbjct: 82 TELKNPVGTPTQA-AGTGGPAAPGGAGKSSANAAGGANSGGGSSGGASGGGGGT 134
Score = 32.0 bits (71), Expect = 0.92
Identities = 20/51 (39%), Positives = 25/51 (49%), Gaps = 5/51 (9%)
Query: 12 TPSEAPHAPGVPPQGRAGGFGKASGALVGAASGSSAGGSSRGGGSGSGASD 62
TP++A G GG GK+S G A+ S GGSS G G G +D
Sbjct: 90 TPTQAAGTGG---PAAPGGAGKSSANAAGGAN--SGGGSSGGASGGGGGTD 135
>gi|238859557 regulatory factor X1 [Homo sapiens]
Length = 979
Score = 38.1 bits (87), Expect = 0.013
Identities = 23/60 (38%), Positives = 30/60 (50%), Gaps = 1/60 (1%)
Query: 8 SKPSTPSEAPHAPGVPPQGRAGGFGKASGALVGAASGSSAGGSSRGGGSGSGASDLGAGS 67
S P+T S+A + G P +G AS GA + +S+GG GGG G G G GS
Sbjct: 342 STPAT-SQAVASSGSMPMYVSGSQVVASSTSTGAGASNSSGGGGSGGGGGGGGGGGGGGS 400
Score = 33.1 bits (74), Expect = 0.41
Identities = 16/46 (34%), Positives = 20/46 (43%)
Query: 21 GVPPQGRAGGFGKASGALVGAASGSSAGGSSRGGGSGSGASDLGAG 66
G +GG G G G G GS+ GGGSG+G + G
Sbjct: 373 GAGASNSSGGGGSGGGGGGGGGGGGGGSGSTGGGGSGAGTYVIQGG 418
>gi|49574532 glycogen synthase kinase 3 alpha [Homo sapiens]
Length = 483
Score = 38.1 bits (87), Expect = 0.013
Identities = 23/60 (38%), Positives = 28/60 (46%), Gaps = 1/60 (1%)
Query: 20 PGVPPQGRAG-GFGKASGALVGAASGSSAGGSSRGGGSGSGASDLGAGSKKSPRLPKCAR 78
PG G G G GKAS +G G+S+ G GG G G+ GAG+ P K R
Sbjct: 36 PGGSASGPGGTGGGKASVGAMGGGVGASSSGGGPGGSGGGGSGGPGAGTSFPPPGVKLGR 95
Score = 33.1 bits (74), Expect = 0.41
Identities = 17/46 (36%), Positives = 19/46 (41%)
Query: 21 GVPPQGRAGGFGKASGALVGAASGSSAGGSSRGGGSGSGASDLGAG 66
G P G GG G+A + G GG GGS SG G G
Sbjct: 4 GGPSGGGPGGSGRARTSSFAEPGGGGGGGGGGPGGSASGPGGTGGG 49
Score = 31.2 bits (69), Expect = 1.6
Identities = 17/47 (36%), Positives = 23/47 (48%), Gaps = 3/47 (6%)
Query: 20 PGVPPQGRAGGFGKASGALVGAASGSSAGGSSRG-GGSGSGASDLGA 65
PG + R F + G G G GGS+ G GG+G G + +GA
Sbjct: 11 PGGSGRARTSSFAEPGGG--GGGGGGGPGGSASGPGGTGGGKASVGA 55
Score = 29.6 bits (65), Expect = 4.6
Identities = 17/44 (38%), Positives = 19/44 (43%), Gaps = 1/44 (2%)
Query: 24 PQGRAGGFGKASGALVGAASGSSAGGSSRGG-GSGSGASDLGAG 66
P G GG G G G+ G +S G G G GAS G G
Sbjct: 25 PGGGGGGGGGGPGGSASGPGGTGGGKASVGAMGGGVGASSSGGG 68
>gi|24586686 voltage-dependent calcium channel gamma-8 subunit [Homo
sapiens]
Length = 425
Score = 38.1 bits (87), Expect = 0.013
Identities = 26/56 (46%), Positives = 30/56 (53%), Gaps = 6/56 (10%)
Query: 13 PSEAPHAPGVPPQGRAGGFGKASGALVGAASGSSAGGSSRGGGSGSGAS-DLGAGS 67
PS+ A G+ G GG G A GA GAA G+ GG GGG G+GA D G S
Sbjct: 313 PSKGSVAAGLA--GAGGGGGGAVGAFGGAAGGAGGGG---GGGGGAGAERDRGGAS 363
>gi|55956899 keratin 9 [Homo sapiens]
Length = 623
Score = 37.7 bits (86), Expect = 0.017
Identities = 21/42 (50%), Positives = 24/42 (57%), Gaps = 4/42 (9%)
Query: 26 GRAGGFGKASGALVGAASGSSAGGSSRGGGSGSGASDLGAGS 67
G GG+G SG+ G + GS GGS GGGSG G G GS
Sbjct: 501 GSGGGYGGGSGSR-GGSGGSYGGGSGSGGGSGGG---YGGGS 538
Score = 34.7 bits (78), Expect = 0.14
Identities = 21/43 (48%), Positives = 23/43 (53%), Gaps = 4/43 (9%)
Query: 26 GRAGGFGKASGALVGAASGSSAGGSSRG-GGSGSGASDLGAGS 67
G GG+G SG G SG S GG S G GG+ G S G GS
Sbjct: 529 GSGGGYGGGSG---GGHSGGSGGGHSGGSGGNYGGGSGSGGGS 568
Score = 33.9 bits (76), Expect = 0.24
Identities = 19/46 (41%), Positives = 23/46 (50%), Gaps = 1/46 (2%)
Query: 26 GRAGGFGKASGALVGAASGSSAGG-SSRGGGSGSGASDLGAGSKKS 70
G GGFG SG G GS GG GGG+G G + ++KS
Sbjct: 110 GFGGGFGGGSGGGFGGGYGSGFGGFGGFGGGAGGGDGGILTANEKS 155
Score = 33.9 bits (76), Expect = 0.24
Identities = 16/43 (37%), Positives = 20/43 (46%)
Query: 26 GRAGGFGKASGALVGAASGSSAGGSSRGGGSGSGASDLGAGSK 68
G G +G SG+ G+ G G SRGG GS G G +
Sbjct: 553 GSGGNYGGGSGSGGGSGGGYGGGSGSRGGSGGSHGGGSGFGGE 595
Score = 33.5 bits (75), Expect = 0.32
Identities = 19/43 (44%), Positives = 24/43 (55%), Gaps = 4/43 (9%)
Query: 26 GRAGGFGKASGALVGAASGSSAGGSSRGGGSGSGASDLGAGSK 68
G +GG G G G + G+ GGS GGGSG G G+GS+
Sbjct: 541 GHSGGSG---GGHSGGSGGNYGGGSGSGGGSGGGYGG-GSGSR 579
Score = 33.5 bits (75), Expect = 0.32
Identities = 19/41 (46%), Positives = 20/41 (48%), Gaps = 1/41 (2%)
Query: 26 GRAGGFGKASGALVGAASGSSAG-GSSRGGGSGSGASDLGA 65
G G G SG G SGS G G S GGGSG G G+
Sbjct: 559 GGGSGSGGGSGGGYGGGSGSRGGSGGSHGGGSGFGGESGGS 599
Score = 32.7 bits (73), Expect = 0.54
Identities = 21/43 (48%), Positives = 23/43 (53%), Gaps = 3/43 (6%)
Query: 25 QGRAGGF--GKASGALVGAASGSSAG-GSSRGGGSGSGASDLG 64
+G +GG G SG G SGS G G S GGGSGSG G
Sbjct: 490 RGGSGGSYGGGGSGGGYGGGSGSRGGSGGSYGGGSGSGGGSGG 532
Score = 32.3 bits (72), Expect = 0.71
Identities = 19/42 (45%), Positives = 20/42 (47%), Gaps = 1/42 (2%)
Query: 26 GRAGGFGKASGALVGAASGSSAGGSSRGGGSGSGASDLGAGS 67
G GG SG G SGS GGS G G GSG+ GS
Sbjct: 545 GSGGGHSGGSGGNYGGGSGSG-GGSGGGYGGGSGSRGGSGGS 585
Score = 31.2 bits (69), Expect = 1.6
Identities = 16/39 (41%), Positives = 18/39 (46%)
Query: 26 GRAGGFGKASGALVGAASGSSAGGSSRGGGSGSGASDLG 64
G GG G + G SG S GG GGG G G+ G
Sbjct: 476 GGRGGSGGSYGRGSRGGSGGSYGGGGSGGGYGGGSGSRG 514
Score = 31.2 bits (69), Expect = 1.6
Identities = 20/45 (44%), Positives = 20/45 (44%), Gaps = 5/45 (11%)
Query: 26 GRAGGFGKASGALVGAASGSSAGGSSRGGGSGSGASDLGAGSKKS 70
G G G SG G SG S GG GSG G G GS KS
Sbjct: 581 GSGGSHGGGSG--FGGESGGSYGGGEEASGSGGG---YGGGSGKS 620
Score = 30.8 bits (68), Expect = 2.1
Identities = 19/41 (46%), Positives = 22/41 (53%), Gaps = 3/41 (7%)
Query: 28 AGGFGKASGALVGAASGSSAGGSSRGGGSGSG--ASDLGAG 66
+ G+G S + G G S G S GGGSG G AS LG G
Sbjct: 50 SSGYGGGSSRVCGRGGGGSFGY-SYGGGSGGGFSASSLGGG 89
Score = 30.8 bits (68), Expect = 2.1
Identities = 18/51 (35%), Positives = 21/51 (41%), Gaps = 9/51 (17%)
Query: 26 GRAGGFGKASGALVGAASGSSAGGSSRGGGSGS---------GASDLGAGS 67
G G +G+ S G + G G GGGSGS G S G GS
Sbjct: 480 GSGGSYGRGSRGGSGGSYGGGGSGGGYGGGSGSRGGSGGSYGGGSGSGGGS 530
Score = 30.8 bits (68), Expect = 2.1
Identities = 16/42 (38%), Positives = 21/42 (50%), Gaps = 1/42 (2%)
Query: 26 GRAGGFGKASGALVGAASGSSAGGSSRGGGSGSGASDLGAGS 67
G +G G + G G + G +GGS GG SG + G GS
Sbjct: 522 GGSGSGGGSGGGYGGGSGGGHSGGSG-GGHSGGSGGNYGGGS 562
Score = 30.8 bits (68), Expect = 2.1
Identities = 14/35 (40%), Positives = 16/35 (45%)
Query: 26 GRAGGFGKASGALVGAASGSSAGGSSRGGGSGSGA 60
G GFG SG G +S G GGGSG +
Sbjct: 587 GGGSGFGGESGGSYGGGEEASGSGGGYGGGSGKSS 621
Score = 30.4 bits (67), Expect = 2.7
Identities = 18/43 (41%), Positives = 20/43 (46%), Gaps = 1/43 (2%)
Query: 26 GRAGGFGKASGALVGAASGSSAGGSSRGG-GSGSGASDLGAGS 67
GR G G G + GS GG S GG G GSG+ GS
Sbjct: 477 GRGGSGGSYGRGSRGGSGGSYGGGGSGGGYGGGSGSRGGSGGS 519
Score = 30.4 bits (67), Expect = 2.7
Identities = 18/45 (40%), Positives = 22/45 (48%), Gaps = 5/45 (11%)
Query: 26 GRAGGFGKASGALVGAASGSSAGGSS----RGGGSGSGASDLGAG 66
G GG+G SG+ G + GS GGS GG G G G+G
Sbjct: 567 GSGGGYGGGSGSR-GGSGGSHGGGSGFGGESGGSYGGGEEASGSG 610
Score = 29.6 bits (65), Expect = 4.6
Identities = 17/42 (40%), Positives = 19/42 (45%), Gaps = 2/42 (4%)
Query: 26 GRAGGFGKASGALVGAASGSSAGGSSRGGGSGSGASDLGAGS 67
GR GG + G G SG SS GGG G G+ G S
Sbjct: 62 GRGGG--GSFGYSYGGGSGGGFSASSLGGGFGGGSRGFGGAS 101
Score = 29.6 bits (65), Expect = 4.6
Identities = 17/34 (50%), Positives = 18/34 (52%), Gaps = 3/34 (8%)
Query: 26 GRAGGFGKASGALVGAASGSSAGGSSRGGGSGSG 59
G + GFG ASG G S S G GGGSG G
Sbjct: 92 GGSRGFGGASG---GGYSSSGGFGGGFGGGSGGG 122
Score = 29.6 bits (65), Expect = 4.6
Identities = 15/34 (44%), Positives = 17/34 (50%)
Query: 26 GRAGGFGKASGALVGAASGSSAGGSSRGGGSGSG 59
G +GG +SG G G S GG G GSG G
Sbjct: 99 GASGGGYSSSGGFGGGFGGGSGGGFGGGYGSGFG 132
Score = 29.3 bits (64), Expect = 6.0
Identities = 16/44 (36%), Positives = 23/44 (52%), Gaps = 1/44 (2%)
Query: 26 GRAGGFGKASGALVGAASGSSAGGSSRGGGSGSGASDLGAGSKK 69
G GG G + G++ + S S+ G GGG S +S G GS +
Sbjct: 17 GGGGGLG-SGGSIRSSYSRFSSSGGGGGGGRFSSSSGYGGGSSR 59
Score = 29.3 bits (64), Expect = 6.0
Identities = 14/40 (35%), Positives = 17/40 (42%)
Query: 21 GVPPQGRAGGFGKASGALVGAASGSSAGGSSRGGGSGSGA 60
G GGFG S GA+ G + GGG G G+
Sbjct: 80 GFSASSLGGGFGGGSRGFGGASGGGYSSSGGFGGGFGGGS 119
Score = 29.3 bits (64), Expect = 6.0
Identities = 18/44 (40%), Positives = 22/44 (50%), Gaps = 3/44 (6%)
Query: 26 GRAGGFGKASGALVGAASGSSAGGSSRG--GGSGSGASDLGAGS 67
G G +G SG+ G + G GGS G GGSG G S G+
Sbjct: 515 GSGGSYGGGSGS-GGGSGGGYGGGSGGGHSGGSGGGHSGGSGGN 557
>gi|19923343 Cbp/p300-interacting transactivator, with Glu/Asp-rich
carboxy-terminal domain, 2 [Homo sapiens]
Length = 270
Score = 37.7 bits (86), Expect = 0.017
Identities = 21/57 (36%), Positives = 28/57 (49%), Gaps = 2/57 (3%)
Query: 18 HAPGVPPQGRAGGFGKASGALVGAASGSSAGGSSRGGGSGSGASDLGAGSKKSPRLP 74
H+ G G +GG G+ G++SG AG S+ GGGSGSG + LP
Sbjct: 160 HSGGSSTPGGSGGSSTPGGS--GSSSGGGAGSSNSGGGSGSGNMPASVAHVPAAMLP 214
>gi|47132620 keratin 2 [Homo sapiens]
Length = 639
Score = 37.7 bits (86), Expect = 0.017
Identities = 20/41 (48%), Positives = 20/41 (48%), Gaps = 2/41 (4%)
Query: 26 GRAGGFGKASGALVGAASGSSAGGSSRGGGSGSGASDLGAG 66
G GGFG A G G G GGSS GGGSG G G
Sbjct: 78 GGGGGFGAAGG--FGGRGGGFGGGSSFGGGSGFSGGGFGGG 116
Score = 33.9 bits (76), Expect = 0.24
Identities = 19/41 (46%), Positives = 19/41 (46%), Gaps = 3/41 (7%)
Query: 26 GRAGGFGKASGALVGAASGSSAGGSSRGGGSGSGASDLGAG 66
G AGGFG G G GSS GG S G G G G G
Sbjct: 84 GAAGGFGGRGG---GFGGGSSFGGGSGFSGGGFGGGGFGGG 121
Score = 33.9 bits (76), Expect = 0.24
Identities = 21/55 (38%), Positives = 27/55 (49%), Gaps = 11/55 (20%)
Query: 25 QGRAGGFGKASGALVGAASGS----SAGGSSRGG-------GSGSGASDLGAGSK 68
+G +GG G SG G+ GS +GG S+GG GSG G G GS+
Sbjct: 549 RGGSGGGGSISGGGYGSGGGSGGRYGSGGGSKGGSISGGGYGSGGGKHSSGGGSR 603
Score = 33.9 bits (76), Expect = 0.24
Identities = 20/42 (47%), Positives = 22/42 (52%), Gaps = 4/42 (9%)
Query: 26 GRAGGFGKASGALVGAASGSSAGGSSRGGGSGSGASDLGAGS 67
G G G SG ++ G S GGSS GGG GSG G GS
Sbjct: 582 GSISGGGYGSGGGKHSSGGGSRGGSSSGGGYGSG----GGGS 619
Score = 33.5 bits (75), Expect = 0.32
Identities = 21/51 (41%), Positives = 24/51 (47%), Gaps = 6/51 (11%)
Query: 26 GRAG-GFGKASGALVGAASGS-----SAGGSSRGGGSGSGASDLGAGSKKS 70
GR G G G G++ G GS S+GG SRGG S G G G S
Sbjct: 571 GRYGSGGGSKGGSISGGGYGSGGGKHSSGGGSRGGSSSGGGYGSGGGGSSS 621
Score = 32.7 bits (73), Expect = 0.54
Identities = 15/30 (50%), Positives = 19/30 (63%)
Query: 41 AASGSSAGGSSRGGGSGSGASDLGAGSKKS 70
A GS GSS GGG SG+S G+G ++S
Sbjct: 517 AFGGSGGRGSSSGGGYSSGSSSYGSGGRQS 546
Score = 31.6 bits (70), Expect = 1.2
Identities = 22/46 (47%), Positives = 26/46 (56%), Gaps = 7/46 (15%)
Query: 26 GRAGGFGKASGALVGAASGSS---AGGSSRG--GGSGSGASDLGAG 66
G +GG G +SG G +SGSS +GG G GGSG G S G G
Sbjct: 519 GGSGGRGSSSGG--GYSSGSSSYGSGGRQSGSRGGSGGGGSISGGG 562
Score = 31.2 bits (69), Expect = 1.6
Identities = 17/41 (41%), Positives = 20/41 (48%), Gaps = 1/41 (2%)
Query: 29 GGFGKASGALVGAASGSSAGGSSRGGGSGSGAS-DLGAGSK 68
G G+ SG+ G+ G S G G G GSG G GSK
Sbjct: 540 GSGGRQSGSRGGSGGGGSISGGGYGSGGGSGGRYGSGGGSK 580
>gi|40068464 AT rich interactive domain 1B (SWI1-like) isoform 2
[Homo sapiens]
Length = 2191
Score = 37.7 bits (86), Expect = 0.017
Identities = 21/45 (46%), Positives = 25/45 (55%), Gaps = 3/45 (6%)
Query: 28 AGGFGKASGALVGAASGSSAGGSSRGGGSGSGASDLGAGSKKSPR 72
AGG G + A AA+ ++AGG GGG G G S G G SPR
Sbjct: 273 AGGAGAGAVAAAAAAAAAAAGG---GGGGGYGGSSAGYGVLSSPR 314
Score = 32.3 bits (72), Expect = 0.71
Identities = 71/334 (21%), Positives = 108/334 (32%), Gaps = 61/334 (18%)
Query: 26 GRAGGFGKASGALVGAASGSSA----------GGSSRGGGSGSGASDLGAGSKKSPRLPK 75
G AG G +GA+ AA+ ++A GGSS G G S G G P
Sbjct: 269 GGAGAGGAGAGAVAAAAAAAAAAAGGGGGGGYGGSSAGYGVLSSPRQQGGGMMMGPGGGG 328
Query: 76 CARCRNHGYASPLKGHKRFCMWRDCQCKKCNLIAERQRVMAAQVALRRQQAQEEELGISH 135
A S G +RF + Q A L + ++
Sbjct: 329 AASLSKAAAGSAAGGFQRFA-------------GQNQHPSGATPTLNQL--------LTS 367
Query: 136 PIPLPSAAELLVKRENNGSNPCLMTECSGTSQPPPASVPTTAASEGRMVIQDIPAVTSRG 195
P P+ R GS P S ++ PPP S P + A+ A G
Sbjct: 368 PSPM--------MRSYGGSYP---EYSSPSAPPPPPSQPQSQAAAAGAAAGGQQAAAGMG 416
Query: 196 HVENT-PDLVSDSTYYSSFYQ---PSLF-----PYYNNLYNCPQYSMALAADSASGEVGN 246
++ + S +++ Q P++ P P M + G N
Sbjct: 417 LGKDMGAQYAAASPAWAAAQQRSHPAMSPGTPGPTMGRSQGSPMDPMVMKRPQLYGMGSN 476
Query: 247 PLG----GSPVKNSLRGLPGPY-----VPGQT-GNQWQMKNMENRHAMSSQYRMHSYYPP 296
P SP G PGP + G+T G M+ + + + + ++ + P
Sbjct: 477 PHSQPQQSSPYPGGSYGPPGPQRYPIGIQGRTPGAMAGMQYPQQQDSGDATWKETFWLMP 536
Query: 297 PSYLGQSVPQFFTFEDAPSYPEARASVFSPPSSQ 330
P Y Q V + P Y + PP +Q
Sbjct: 537 PQYGQQGVSGYCQQGQQPYYSQQPQPPHLPPQAQ 570
Score = 31.6 bits (70), Expect = 1.2
Identities = 26/82 (31%), Positives = 38/82 (46%), Gaps = 14/82 (17%)
Query: 6 AFSKPSTPSEAPHAPGVPPQGRAGGFGKASGALVGAASGSSAGGSSRGGGSGSGASDLGA 65
++ + S+PS AP P PQ +A AA+G++AGG G G G D+GA
Sbjct: 378 SYPEYSSPS-APPPPPSQPQSQA------------AAAGAAAGGQQAAAGMGLG-KDMGA 423
Query: 66 GSKKSPRLPKCARCRNHGYASP 87
+ A+ R+H SP
Sbjct: 424 QYAAASPAWAAAQQRSHPAMSP 445
>gi|40068466 AT rich interactive domain 1B (SWI1-like) isoform 1
[Homo sapiens]
Length = 2231
Score = 37.7 bits (86), Expect = 0.017
Identities = 21/45 (46%), Positives = 25/45 (55%), Gaps = 3/45 (6%)
Query: 28 AGGFGKASGALVGAASGSSAGGSSRGGGSGSGASDLGAGSKKSPR 72
AGG G + A AA+ ++AGG GGG G G S G G SPR
Sbjct: 273 AGGAGAGAVAAAAAAAAAAAGG---GGGGGYGGSSAGYGVLSSPR 314
Score = 31.6 bits (70), Expect = 1.2
Identities = 26/82 (31%), Positives = 38/82 (46%), Gaps = 14/82 (17%)
Query: 6 AFSKPSTPSEAPHAPGVPPQGRAGGFGKASGALVGAASGSSAGGSSRGGGSGSGASDLGA 65
++ + S+PS AP P PQ +A AA+G++AGG G G G D+GA
Sbjct: 378 SYPEYSSPS-APPPPPSQPQSQA------------AAAGAAAGGQQAAAGMGLG-KDMGA 423
Query: 66 GSKKSPRLPKCARCRNHGYASP 87
+ A+ R+H SP
Sbjct: 424 QYAAASPAWAAAQQRSHPAMSP 445
Score = 29.3 bits (64), Expect = 6.0
Identities = 24/79 (30%), Positives = 30/79 (37%), Gaps = 10/79 (12%)
Query: 26 GRAGGFGKASGALVGAASGSSA----------GGSSRGGGSGSGASDLGAGSKKSPRLPK 75
G AG G +GA+ AA+ ++A GGSS G G S G G P
Sbjct: 269 GGAGAGGAGAGAVAAAAAAAAAAAGGGGGGGYGGSSAGYGVLSSPRQQGGGMMMGPGGGG 328
Query: 76 CARCRNHGYASPLKGHKRF 94
A S G +RF
Sbjct: 329 AASLSKAAAGSAAGGFQRF 347
>gi|40068462 AT rich interactive domain 1B (SWI1-like) isoform 3
[Homo sapiens]
Length = 2178
Score = 37.7 bits (86), Expect = 0.017
Identities = 21/45 (46%), Positives = 25/45 (55%), Gaps = 3/45 (6%)
Query: 28 AGGFGKASGALVGAASGSSAGGSSRGGGSGSGASDLGAGSKKSPR 72
AGG G + A AA+ ++AGG GGG G G S G G SPR
Sbjct: 273 AGGAGAGAVAAAAAAAAAAAGG---GGGGGYGGSSAGYGVLSSPR 314
Score = 31.6 bits (70), Expect = 1.2
Identities = 26/82 (31%), Positives = 38/82 (46%), Gaps = 14/82 (17%)
Query: 6 AFSKPSTPSEAPHAPGVPPQGRAGGFGKASGALVGAASGSSAGGSSRGGGSGSGASDLGA 65
++ + S+PS AP P PQ +A AA+G++AGG G G G D+GA
Sbjct: 378 SYPEYSSPS-APPPPPSQPQSQA------------AAAGAAAGGQQAAAGMGLG-KDMGA 423
Query: 66 GSKKSPRLPKCARCRNHGYASP 87
+ A+ R+H SP
Sbjct: 424 QYAAASPAWAAAQQRSHPAMSP 445
Score = 29.3 bits (64), Expect = 6.0
Identities = 24/79 (30%), Positives = 30/79 (37%), Gaps = 10/79 (12%)
Query: 26 GRAGGFGKASGALVGAASGSSA----------GGSSRGGGSGSGASDLGAGSKKSPRLPK 75
G AG G +GA+ AA+ ++A GGSS G G S G G P
Sbjct: 269 GGAGAGGAGAGAVAAAAAAAAAAAGGGGGGGYGGSSAGYGVLSSPRQQGGGMMMGPGGGG 328
Query: 76 CARCRNHGYASPLKGHKRF 94
A S G +RF
Sbjct: 329 AASLSKAAAGSAAGGFQRF 347
>gi|51479192 ring finger protein 1 [Homo sapiens]
Length = 406
Score = 37.4 bits (85), Expect = 0.022
Identities = 41/133 (30%), Positives = 54/133 (40%), Gaps = 13/133 (9%)
Query: 5 EAFSKPSTPSEAP-HAPGVPPQGRAGGF-----GKASGALVGAASGSSAG--GSSRGGGS 56
E S S P AP AP P G AGG G +G + G A +G G + GGG+
Sbjct: 184 EDVSSDSAPDSAPGPAPKRPRGGGAGGSSVGTGGGGTGGVGGGAGSEDSGDRGGTLGGGT 243
Query: 57 GSGASDLGAGSKKSPRLPKCARCRNHGYASPLKGHK-RFCMWRDCQCKKCNLIAERQRVM 115
S GA S P R H PL K +C R + + + +
Sbjct: 244 LGPPSPPGAPSPPEPGGEIELVFRPH----PLLVEKGEYCQTRYVKTTGNATVDHLSKYL 299
Query: 116 AAQVALRRQQAQE 128
A ++AL R+Q QE
Sbjct: 300 ALRIALERRQQQE 312
Score = 29.6 bits (65), Expect = 4.6
Identities = 22/59 (37%), Positives = 28/59 (47%), Gaps = 9/59 (15%)
Query: 21 GVPPQGRAGGFGKASGALVGAA--------SGSSAGGSSRG-GGSGSGASDLGAGSKKS 70
G P +G G +S + +A G AGGSS G GG G+G GAGS+ S
Sbjct: 174 GEPGEGEGDGEDVSSDSAPDSAPGPAPKRPRGGGAGGSSVGTGGGGTGGVGGGAGSEDS 232
>gi|4501957 alpha-1D-adrenergic receptor [Homo sapiens]
Length = 572
Score = 37.4 bits (85), Expect = 0.022
Identities = 25/56 (44%), Positives = 31/56 (55%), Gaps = 4/56 (7%)
Query: 11 STPSEAPHAPGVPPQGRAGGFGKASGALVGAASGSSAG--GSSRGGGSGSGASDLG 64
+ PSE P GVP G AGG G GA G + SSAG GS+ GG +G + +G
Sbjct: 35 AAPSEGPAVGGVP--GGAGGGGGVVGAGSGEDNRSSAGEPGSAGAGGDVNGTAAVG 88
Score = 30.4 bits (67), Expect = 2.7
Identities = 20/66 (30%), Positives = 27/66 (40%), Gaps = 3/66 (4%)
Query: 6 AFSKPSTPSEAPHAPGVPPQGRAGGFGKASGALVGAASGSSAGGSSRGGGSGSGASDLGA 65
+F P S A + G AGG + G VG G + GG GG G+G+ +
Sbjct: 10 SFEGPRPDSSAGGSSAGGGGGSAGGAAPSEGPAVGGVPGGAGGG---GGVVGAGSGEDNR 66
Query: 66 GSKKSP 71
S P
Sbjct: 67 SSAGEP 72
Score = 29.6 bits (65), Expect = 4.6
Identities = 19/54 (35%), Positives = 23/54 (42%), Gaps = 2/54 (3%)
Query: 21 GVPPQGRAGGF--GKASGALVGAASGSSAGGSSRGGGSGSGASDLGAGSKKSPR 72
G P AGG G G+ GAA GG+G G +GAGS + R
Sbjct: 13 GPRPDSSAGGSSAGGGGGSAGGAAPSEGPAVGGVPGGAGGGGGVVGAGSGEDNR 66
>gi|46519154 ankyrin repeat and KH domain containing 1 isoform 3
[Homo sapiens]
Length = 627
Score = 37.4 bits (85), Expect = 0.022
Identities = 21/47 (44%), Positives = 23/47 (48%)
Query: 13 PSEAPHAPGVPPQGRAGGFGKASGALVGAASGSSAGGSSRGGGSGSG 59
P AP PP G G + L G A +S GSS GGGSGSG
Sbjct: 21 PRSAPAGASEPPPPGGVGLGIRTVRLFGEAGPASGVGSSGGGGSGSG 67
Database: hs.faa
Posted date: Aug 4, 2009 4:42 PM
Number of letters in database: 18,247,518
Number of sequences in database: 37,866
Lambda K H
0.311 0.128 0.383
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 18,203,366
Number of Sequences: 37866
Number of extensions: 1006901
Number of successful extensions: 10762
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 207
Number of HSP's successfully gapped in prelim test: 299
Number of HSP's that attempted gapping in prelim test: 6823
Number of HSP's gapped (non-prelim): 2727
length of query: 373
length of database: 18,247,518
effective HSP length: 104
effective length of query: 269
effective length of database: 14,309,454
effective search space: 3849243126
effective search space used: 3849243126
T: 11
A: 40
X1: 16 ( 7.2 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (21.8 bits)
S2: 63 (28.9 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
Home |
Table of Contents |
Search text |
Search genes |
Search sequences |
Purchase |
FAQ |
Blog |
Help
Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.