FAM47A 2207

Name: FAM47A	Sequence: fasta or formatted (791aa)		NCBI GI: 118601070
Description: hypothetical protein LOC158724		Not currently referenced in the text
Composition: Amino acid Percentage Count Longest homopolymer A alanine 3.5 28 2 C cysteine 2.3 18 2 D aspartate 4.8 38 2 E glutamate 9.4 74 2 F phenylalanine 2.9 23 2 G glycine 4.2 33 1 H histidine 3.2 25 1 I isoleucine 1.9 15 2 K lysine 9.2 73 2 L leucine 10.0 79 3 M methionine 1.4 11 1 N asparagine 0.8 6 1 P proline 12.6 100 2 Q glutamine 3.0 24 1 R arginine 8.2 65 3 S serine 9.2 73 2 T threonine 5.8 46 2 V valine 3.9 31 1 W tryptophan 1.3 10 1 Y tyrosine 2.4 19 1			Comparative genomics: Search single species RefSeq proteins at NCBI H. sapiens M. musculus D. rerio C. intestinalis S. purpuratus D. melanogaster C. elegans A. thaliana S. cerevisiae E. coli W3110 A. pernix K1 Search summary Figure data Additional searches of RefSeq proteins at NCBI All Eukaryotes Bacteria Archaea Viruses Primates Mammals Vertebrates
Related human proteins: Protein Relative score Description Self-match 1.000 hypothetical protein LOC158724 FAM47C 0.373 hypothetical protein LOC442444 FAM47B 0.282 hypothetical protein LOC170062 FAM47E 0.066 hypothetical protein LOC100129583 SRRM1 0.033 serine/arginine repetitive matrix 1 MLL2 0.026 myeloid/lymphoid or mixed-lineage leukemia 2 IWS1 0.024 IWS1 homolog SRRM2 0.023 splicing coactivator subunit SRm300 PRG4 0.022 proteoglycan 4 isoform D PRG4 0.022 proteoglycan 4 isoform C PRG4 0.022 proteoglycan 4 isoform B PRG4 0.022 proteoglycan 4 isoform A NPIPL3 0.021 nuclear pore complex interacting protein-like 3 [Ho... MUC2 0.019 mucin 2 precursor PRAM1 0.018 PML-RARA regulated adaptor molecule 1 FLJ22184 0.018 PREDICTED: hypothetical protein FLJ22184 SON 0.018 SON DNA-binding protein isoform F SON 0.018 SON DNA-binding protein isoform B C14orf174 0.018 hypothetical protein LOC161394 BRD4 0.018 bromodomain-containing protein 4 isoform long MAP1A 0.017 microtubule-associated protein 1A MAP1B 0.017 microtubule-associated protein 1B MLL4 0.017 myeloid/lymphoid or mixed-lineage leukemia 4 NEFH 0.016 neurofilament, heavy polypeptide 200kDa LOC100132247 0.015 hypothetical protein LOC100132247 RAPH1 0.015 Ras association and pleckstrin homology domains 1 is... LOC284297 0.015 hypothetical protein LOC284297 YLPM1 0.015 YLP motif containing 1 LOC645971 0.015 PREDICTED: similar to hCG2036794 LOC645971 0.015 PREDICTED: similar to hCG2036794 Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.