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Search of human proteins with 61742793
BLASTP 2.2.11 [Jun-05-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= gi|61742793 lymphocyte-specific protein 1 isoform 2 [Homo
sapiens]
(277 letters)
Database: hs.faa
37,866 sequences; 18,247,518 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|61742793 lymphocyte-specific protein 1 isoform 2 [Homo sapiens] 559 e-160
gi|61742791 lymphocyte-specific protein 1 isoform 2 [Homo sapiens] 559 e-160
gi|61742789 lymphocyte-specific protein 1 isoform 2 [Homo sapiens] 559 e-160
gi|10880979 lymphocyte-specific protein 1 isoform 1 [Homo sapiens] 559 e-160
gi|15149465 caldesmon 1 isoform 5 [Homo sapiens] 70 3e-12
gi|15149463 caldesmon 1 isoform 4 [Homo sapiens] 70 3e-12
gi|15149467 caldesmon 1 isoform 3 [Homo sapiens] 70 3e-12
gi|4826657 caldesmon 1 isoform 2 [Homo sapiens] 70 3e-12
gi|44680105 caldesmon 1 isoform 1 [Homo sapiens] 70 3e-12
gi|169206069 PREDICTED: similar to hCG1791648 [Homo sapiens] 58 8e-09
gi|169206451 PREDICTED: similar to hCG1791648 [Homo sapiens] 58 8e-09
gi|169205907 PREDICTED: similar to hCG1791648 [Homo sapiens] 57 2e-08
gi|157738649 neurofilament, medium polypeptide 150kDa isoform 1 ... 54 1e-07
gi|157738641 neurofilament, medium polypeptide 150kDa isoform 2 ... 54 1e-07
gi|78190492 retinitis pigmentosa GTPase regulator isoform C [Hom... 39 0.007
gi|221307607 RANBP2-like and GRIP domain containing 3 [Homo sapi... 38 0.011
gi|4759128 solute carrier family 24 (sodium/potassium/calcium ex... 37 0.019
gi|16332372 cell division cycle 2-like 1 (PITSLRE proteins) isof... 37 0.019
gi|16332370 cell division cycle 2-like 1 (PITSLRE proteins) isof... 37 0.019
gi|16332364 cell division cycle 2-like 1 (PITSLRE proteins) isof... 37 0.019
gi|16332362 cell division cycle 2-like 1 (PITSLRE proteins) isof... 37 0.019
gi|16332360 cell division cycle 2-like 1 (PITSLRE proteins) isof... 37 0.019
gi|16332358 cell division cycle 2-like 1 (PITSLRE proteins) isof... 37 0.019
gi|92087055 PERQ amino acid rich, with GYF domain 1 [Homo sapiens] 37 0.025
gi|56549694 enabled homolog isoform a [Homo sapiens] 36 0.032
gi|39930375 enabled homolog isoform b [Homo sapiens] 36 0.032
gi|24431975 hypothetical protein LOC26148 [Homo sapiens] 36 0.042
gi|21735415 centromere protein B [Homo sapiens] 35 0.055
gi|47578107 delangin isoform B [Homo sapiens] 35 0.055
gi|47578105 delangin isoform A [Homo sapiens] 35 0.055
>gi|61742793 lymphocyte-specific protein 1 isoform 2 [Homo sapiens]
Length = 277
Score = 559 bits (1441), Expect = e-160
Identities = 277/277 (100%), Positives = 277/277 (100%)
Query: 1 MLLSLKPSEAPELDEDEGFGDWSQRPEQRQQHEGAQGALDSGEPPQCRSPEGEQEDRPGL 60
MLLSLKPSEAPELDEDEGFGDWSQRPEQRQQHEGAQGALDSGEPPQCRSPEGEQEDRPGL
Sbjct: 1 MLLSLKPSEAPELDEDEGFGDWSQRPEQRQQHEGAQGALDSGEPPQCRSPEGEQEDRPGL 60
Query: 61 HAYEKEDSDEVHLEELSLSKEGPGPEDTVQDNLGAAGAEEEQEEHQKCQQPRTPSPLVLE 120
HAYEKEDSDEVHLEELSLSKEGPGPEDTVQDNLGAAGAEEEQEEHQKCQQPRTPSPLVLE
Sbjct: 61 HAYEKEDSDEVHLEELSLSKEGPGPEDTVQDNLGAAGAEEEQEEHQKCQQPRTPSPLVLE 120
Query: 121 GTIEQSSPPLSPTTKLIDRTESLNRSIEKSNSVKKSQPDLPISKIDQWLEQYTQAIETAG 180
GTIEQSSPPLSPTTKLIDRTESLNRSIEKSNSVKKSQPDLPISKIDQWLEQYTQAIETAG
Sbjct: 121 GTIEQSSPPLSPTTKLIDRTESLNRSIEKSNSVKKSQPDLPISKIDQWLEQYTQAIETAG 180
Query: 181 RTPKLARQASIELPSMAVASTKSRWETGEVQAQSAAKTPSCKDIVAGDMSKKSLWEQKGG 240
RTPKLARQASIELPSMAVASTKSRWETGEVQAQSAAKTPSCKDIVAGDMSKKSLWEQKGG
Sbjct: 181 RTPKLARQASIELPSMAVASTKSRWETGEVQAQSAAKTPSCKDIVAGDMSKKSLWEQKGG 240
Query: 241 SKTSSTIKSTPSGKRYKFVATGHGKYEKVLVEGGPAP 277
SKTSSTIKSTPSGKRYKFVATGHGKYEKVLVEGGPAP
Sbjct: 241 SKTSSTIKSTPSGKRYKFVATGHGKYEKVLVEGGPAP 277
>gi|61742791 lymphocyte-specific protein 1 isoform 2 [Homo sapiens]
Length = 277
Score = 559 bits (1441), Expect = e-160
Identities = 277/277 (100%), Positives = 277/277 (100%)
Query: 1 MLLSLKPSEAPELDEDEGFGDWSQRPEQRQQHEGAQGALDSGEPPQCRSPEGEQEDRPGL 60
MLLSLKPSEAPELDEDEGFGDWSQRPEQRQQHEGAQGALDSGEPPQCRSPEGEQEDRPGL
Sbjct: 1 MLLSLKPSEAPELDEDEGFGDWSQRPEQRQQHEGAQGALDSGEPPQCRSPEGEQEDRPGL 60
Query: 61 HAYEKEDSDEVHLEELSLSKEGPGPEDTVQDNLGAAGAEEEQEEHQKCQQPRTPSPLVLE 120
HAYEKEDSDEVHLEELSLSKEGPGPEDTVQDNLGAAGAEEEQEEHQKCQQPRTPSPLVLE
Sbjct: 61 HAYEKEDSDEVHLEELSLSKEGPGPEDTVQDNLGAAGAEEEQEEHQKCQQPRTPSPLVLE 120
Query: 121 GTIEQSSPPLSPTTKLIDRTESLNRSIEKSNSVKKSQPDLPISKIDQWLEQYTQAIETAG 180
GTIEQSSPPLSPTTKLIDRTESLNRSIEKSNSVKKSQPDLPISKIDQWLEQYTQAIETAG
Sbjct: 121 GTIEQSSPPLSPTTKLIDRTESLNRSIEKSNSVKKSQPDLPISKIDQWLEQYTQAIETAG 180
Query: 181 RTPKLARQASIELPSMAVASTKSRWETGEVQAQSAAKTPSCKDIVAGDMSKKSLWEQKGG 240
RTPKLARQASIELPSMAVASTKSRWETGEVQAQSAAKTPSCKDIVAGDMSKKSLWEQKGG
Sbjct: 181 RTPKLARQASIELPSMAVASTKSRWETGEVQAQSAAKTPSCKDIVAGDMSKKSLWEQKGG 240
Query: 241 SKTSSTIKSTPSGKRYKFVATGHGKYEKVLVEGGPAP 277
SKTSSTIKSTPSGKRYKFVATGHGKYEKVLVEGGPAP
Sbjct: 241 SKTSSTIKSTPSGKRYKFVATGHGKYEKVLVEGGPAP 277
>gi|61742789 lymphocyte-specific protein 1 isoform 2 [Homo sapiens]
Length = 277
Score = 559 bits (1441), Expect = e-160
Identities = 277/277 (100%), Positives = 277/277 (100%)
Query: 1 MLLSLKPSEAPELDEDEGFGDWSQRPEQRQQHEGAQGALDSGEPPQCRSPEGEQEDRPGL 60
MLLSLKPSEAPELDEDEGFGDWSQRPEQRQQHEGAQGALDSGEPPQCRSPEGEQEDRPGL
Sbjct: 1 MLLSLKPSEAPELDEDEGFGDWSQRPEQRQQHEGAQGALDSGEPPQCRSPEGEQEDRPGL 60
Query: 61 HAYEKEDSDEVHLEELSLSKEGPGPEDTVQDNLGAAGAEEEQEEHQKCQQPRTPSPLVLE 120
HAYEKEDSDEVHLEELSLSKEGPGPEDTVQDNLGAAGAEEEQEEHQKCQQPRTPSPLVLE
Sbjct: 61 HAYEKEDSDEVHLEELSLSKEGPGPEDTVQDNLGAAGAEEEQEEHQKCQQPRTPSPLVLE 120
Query: 121 GTIEQSSPPLSPTTKLIDRTESLNRSIEKSNSVKKSQPDLPISKIDQWLEQYTQAIETAG 180
GTIEQSSPPLSPTTKLIDRTESLNRSIEKSNSVKKSQPDLPISKIDQWLEQYTQAIETAG
Sbjct: 121 GTIEQSSPPLSPTTKLIDRTESLNRSIEKSNSVKKSQPDLPISKIDQWLEQYTQAIETAG 180
Query: 181 RTPKLARQASIELPSMAVASTKSRWETGEVQAQSAAKTPSCKDIVAGDMSKKSLWEQKGG 240
RTPKLARQASIELPSMAVASTKSRWETGEVQAQSAAKTPSCKDIVAGDMSKKSLWEQKGG
Sbjct: 181 RTPKLARQASIELPSMAVASTKSRWETGEVQAQSAAKTPSCKDIVAGDMSKKSLWEQKGG 240
Query: 241 SKTSSTIKSTPSGKRYKFVATGHGKYEKVLVEGGPAP 277
SKTSSTIKSTPSGKRYKFVATGHGKYEKVLVEGGPAP
Sbjct: 241 SKTSSTIKSTPSGKRYKFVATGHGKYEKVLVEGGPAP 277
>gi|10880979 lymphocyte-specific protein 1 isoform 1 [Homo sapiens]
Length = 339
Score = 559 bits (1441), Expect = e-160
Identities = 277/277 (100%), Positives = 277/277 (100%)
Query: 1 MLLSLKPSEAPELDEDEGFGDWSQRPEQRQQHEGAQGALDSGEPPQCRSPEGEQEDRPGL 60
MLLSLKPSEAPELDEDEGFGDWSQRPEQRQQHEGAQGALDSGEPPQCRSPEGEQEDRPGL
Sbjct: 63 MLLSLKPSEAPELDEDEGFGDWSQRPEQRQQHEGAQGALDSGEPPQCRSPEGEQEDRPGL 122
Query: 61 HAYEKEDSDEVHLEELSLSKEGPGPEDTVQDNLGAAGAEEEQEEHQKCQQPRTPSPLVLE 120
HAYEKEDSDEVHLEELSLSKEGPGPEDTVQDNLGAAGAEEEQEEHQKCQQPRTPSPLVLE
Sbjct: 123 HAYEKEDSDEVHLEELSLSKEGPGPEDTVQDNLGAAGAEEEQEEHQKCQQPRTPSPLVLE 182
Query: 121 GTIEQSSPPLSPTTKLIDRTESLNRSIEKSNSVKKSQPDLPISKIDQWLEQYTQAIETAG 180
GTIEQSSPPLSPTTKLIDRTESLNRSIEKSNSVKKSQPDLPISKIDQWLEQYTQAIETAG
Sbjct: 183 GTIEQSSPPLSPTTKLIDRTESLNRSIEKSNSVKKSQPDLPISKIDQWLEQYTQAIETAG 242
Query: 181 RTPKLARQASIELPSMAVASTKSRWETGEVQAQSAAKTPSCKDIVAGDMSKKSLWEQKGG 240
RTPKLARQASIELPSMAVASTKSRWETGEVQAQSAAKTPSCKDIVAGDMSKKSLWEQKGG
Sbjct: 243 RTPKLARQASIELPSMAVASTKSRWETGEVQAQSAAKTPSCKDIVAGDMSKKSLWEQKGG 302
Query: 241 SKTSSTIKSTPSGKRYKFVATGHGKYEKVLVEGGPAP 277
SKTSSTIKSTPSGKRYKFVATGHGKYEKVLVEGGPAP
Sbjct: 303 SKTSSTIKSTPSGKRYKFVATGHGKYEKVLVEGGPAP 339
>gi|15149465 caldesmon 1 isoform 5 [Homo sapiens]
Length = 532
Score = 69.7 bits (169), Expect = 3e-12
Identities = 68/271 (25%), Positives = 110/271 (40%), Gaps = 52/271 (19%)
Query: 30 QQHEGAQGALDSGEPPQCRSPEGEQEDRPGLHAYEKEDSDEVHLEELSLSKEG------P 83
++ EGA + R GE E +K+ + LEEL +E
Sbjct: 261 KEAEGAPQVEAGKRLEELRRRRGETESEEFEKLKQKQQEAALELEELKKKREERRKVLEE 320
Query: 84 GPEDTVQDNLGAAGAEEEQE-------EHQKCQQPRTPSPLVLEGTIEQSSP-----PLS 131
+ Q+ EEE++ E ++ + + +G + P P
Sbjct: 321 EEQRRKQEEADRKLREEEEKRRLKEEIERRRAEAAEKRQKMPEDGLSDDKKPFKCFTPKG 380
Query: 132 PTTKLIDRTESLNRSIEKSNSVKKSQPDLPISKIDQWLEQYTQAIE-TAGRTPKLARQAS 190
+ K+ +R E LN+S++KS+ VK + +SKID LEQYT AIE T P +
Sbjct: 381 SSLKIEERAEFLNKSVQKSSGVKSTHQAAIVSKIDSRLEQYTSAIEGTKSAKPTKPAASD 440
Query: 191 IELPSMAVASTKSRWETGEV-QAQSAAKTPSCK--------------------------- 222
+ +P+ V + KS WE G V + +AA TP+ +
Sbjct: 441 LPVPAEGVRNIKSMWEKGNVFSSPTAAGTPNKETAGLKVGVSSRINEWLTKTPDGNKSPA 500
Query: 223 ----DIVAGDM-SKKSLWEQKGGSKTSSTIK 248
D+ GD+ SK++LWE++ K +S K
Sbjct: 501 PKPSDLRPGDVSSKRNLWEKQSVDKVTSPTK 531
>gi|15149463 caldesmon 1 isoform 4 [Homo sapiens]
Length = 558
Score = 69.7 bits (169), Expect = 3e-12
Identities = 68/271 (25%), Positives = 110/271 (40%), Gaps = 52/271 (19%)
Query: 30 QQHEGAQGALDSGEPPQCRSPEGEQEDRPGLHAYEKEDSDEVHLEELSLSKEG------P 83
++ EGA + R GE E +K+ + LEEL +E
Sbjct: 287 KEAEGAPQVEAGKRLEELRRRRGETESEEFEKLKQKQQEAALELEELKKKREERRKVLEE 346
Query: 84 GPEDTVQDNLGAAGAEEEQE-------EHQKCQQPRTPSPLVLEGTIEQSSP-----PLS 131
+ Q+ EEE++ E ++ + + +G + P P
Sbjct: 347 EEQRRKQEEADRKLREEEEKRRLKEEIERRRAEAAEKRQKMPEDGLSDDKKPFKCFTPKG 406
Query: 132 PTTKLIDRTESLNRSIEKSNSVKKSQPDLPISKIDQWLEQYTQAIE-TAGRTPKLARQAS 190
+ K+ +R E LN+S++KS+ VK + +SKID LEQYT AIE T P +
Sbjct: 407 SSLKIEERAEFLNKSVQKSSGVKSTHQAAIVSKIDSRLEQYTSAIEGTKSAKPTKPAASD 466
Query: 191 IELPSMAVASTKSRWETGEV-QAQSAAKTPSCK--------------------------- 222
+ +P+ V + KS WE G V + +AA TP+ +
Sbjct: 467 LPVPAEGVRNIKSMWEKGNVFSSPTAAGTPNKETAGLKVGVSSRINEWLTKTPDGNKSPA 526
Query: 223 ----DIVAGDM-SKKSLWEQKGGSKTSSTIK 248
D+ GD+ SK++LWE++ K +S K
Sbjct: 527 PKPSDLRPGDVSSKRNLWEKQSVDKVTSPTK 557
>gi|15149467 caldesmon 1 isoform 3 [Homo sapiens]
Length = 564
Score = 69.7 bits (169), Expect = 3e-12
Identities = 68/271 (25%), Positives = 110/271 (40%), Gaps = 52/271 (19%)
Query: 30 QQHEGAQGALDSGEPPQCRSPEGEQEDRPGLHAYEKEDSDEVHLEELSLSKEG------P 83
++ EGA + R GE E +K+ + LEEL +E
Sbjct: 293 KEAEGAPQVEAGKRLEELRRRRGETESEEFEKLKQKQQEAALELEELKKKREERRKVLEE 352
Query: 84 GPEDTVQDNLGAAGAEEEQE-------EHQKCQQPRTPSPLVLEGTIEQSSP-----PLS 131
+ Q+ EEE++ E ++ + + +G + P P
Sbjct: 353 EEQRRKQEEADRKLREEEEKRRLKEEIERRRAEAAEKRQKMPEDGLSDDKKPFKCFTPKG 412
Query: 132 PTTKLIDRTESLNRSIEKSNSVKKSQPDLPISKIDQWLEQYTQAIE-TAGRTPKLARQAS 190
+ K+ +R E LN+S++KS+ VK + +SKID LEQYT AIE T P +
Sbjct: 413 SSLKIEERAEFLNKSVQKSSGVKSTHQAAIVSKIDSRLEQYTSAIEGTKSAKPTKPAASD 472
Query: 191 IELPSMAVASTKSRWETGEV-QAQSAAKTPSCK--------------------------- 222
+ +P+ V + KS WE G V + +AA TP+ +
Sbjct: 473 LPVPAEGVRNIKSMWEKGNVFSSPTAAGTPNKETAGLKVGVSSRINEWLTKTPDGNKSPA 532
Query: 223 ----DIVAGDM-SKKSLWEQKGGSKTSSTIK 248
D+ GD+ SK++LWE++ K +S K
Sbjct: 533 PKPSDLRPGDVSSKRNLWEKQSVDKVTSPTK 563
>gi|4826657 caldesmon 1 isoform 2 [Homo sapiens]
Length = 538
Score = 69.7 bits (169), Expect = 3e-12
Identities = 68/271 (25%), Positives = 110/271 (40%), Gaps = 52/271 (19%)
Query: 30 QQHEGAQGALDSGEPPQCRSPEGEQEDRPGLHAYEKEDSDEVHLEELSLSKEG------P 83
++ EGA + R GE E +K+ + LEEL +E
Sbjct: 267 KEAEGAPQVEAGKRLEELRRRRGETESEEFEKLKQKQQEAALELEELKKKREERRKVLEE 326
Query: 84 GPEDTVQDNLGAAGAEEEQE-------EHQKCQQPRTPSPLVLEGTIEQSSP-----PLS 131
+ Q+ EEE++ E ++ + + +G + P P
Sbjct: 327 EEQRRKQEEADRKLREEEEKRRLKEEIERRRAEAAEKRQKMPEDGLSDDKKPFKCFTPKG 386
Query: 132 PTTKLIDRTESLNRSIEKSNSVKKSQPDLPISKIDQWLEQYTQAIE-TAGRTPKLARQAS 190
+ K+ +R E LN+S++KS+ VK + +SKID LEQYT AIE T P +
Sbjct: 387 SSLKIEERAEFLNKSVQKSSGVKSTHQAAIVSKIDSRLEQYTSAIEGTKSAKPTKPAASD 446
Query: 191 IELPSMAVASTKSRWETGEV-QAQSAAKTPSCK--------------------------- 222
+ +P+ V + KS WE G V + +AA TP+ +
Sbjct: 447 LPVPAEGVRNIKSMWEKGNVFSSPTAAGTPNKETAGLKVGVSSRINEWLTKTPDGNKSPA 506
Query: 223 ----DIVAGDM-SKKSLWEQKGGSKTSSTIK 248
D+ GD+ SK++LWE++ K +S K
Sbjct: 507 PKPSDLRPGDVSSKRNLWEKQSVDKVTSPTK 537
>gi|44680105 caldesmon 1 isoform 1 [Homo sapiens]
Length = 793
Score = 69.7 bits (169), Expect = 3e-12
Identities = 68/271 (25%), Positives = 110/271 (40%), Gaps = 52/271 (19%)
Query: 30 QQHEGAQGALDSGEPPQCRSPEGEQEDRPGLHAYEKEDSDEVHLEELSLSKEG------P 83
++ EGA + R GE E +K+ + LEEL +E
Sbjct: 522 KEAEGAPQVEAGKRLEELRRRRGETESEEFEKLKQKQQEAALELEELKKKREERRKVLEE 581
Query: 84 GPEDTVQDNLGAAGAEEEQE-------EHQKCQQPRTPSPLVLEGTIEQSSP-----PLS 131
+ Q+ EEE++ E ++ + + +G + P P
Sbjct: 582 EEQRRKQEEADRKLREEEEKRRLKEEIERRRAEAAEKRQKMPEDGLSDDKKPFKCFTPKG 641
Query: 132 PTTKLIDRTESLNRSIEKSNSVKKSQPDLPISKIDQWLEQYTQAIE-TAGRTPKLARQAS 190
+ K+ +R E LN+S++KS+ VK + +SKID LEQYT AIE T P +
Sbjct: 642 SSLKIEERAEFLNKSVQKSSGVKSTHQAAIVSKIDSRLEQYTSAIEGTKSAKPTKPAASD 701
Query: 191 IELPSMAVASTKSRWETGEV-QAQSAAKTPSCK--------------------------- 222
+ +P+ V + KS WE G V + +AA TP+ +
Sbjct: 702 LPVPAEGVRNIKSMWEKGNVFSSPTAAGTPNKETAGLKVGVSSRINEWLTKTPDGNKSPA 761
Query: 223 ----DIVAGDM-SKKSLWEQKGGSKTSSTIK 248
D+ GD+ SK++LWE++ K +S K
Sbjct: 762 PKPSDLRPGDVSSKRNLWEKQSVDKVTSPTK 792
>gi|169206069 PREDICTED: similar to hCG1791648 [Homo sapiens]
Length = 127
Score = 58.2 bits (139), Expect = 8e-09
Identities = 28/31 (90%), Positives = 29/31 (93%)
Query: 196 MAVASTKSRWETGEVQAQSAAKTPSCKDIVA 226
MAVASTKSRWETGEVQAQSAAKTPSCK +A
Sbjct: 1 MAVASTKSRWETGEVQAQSAAKTPSCKAQIA 31
>gi|169206451 PREDICTED: similar to hCG1791648 [Homo sapiens]
Length = 127
Score = 58.2 bits (139), Expect = 8e-09
Identities = 28/31 (90%), Positives = 29/31 (93%)
Query: 196 MAVASTKSRWETGEVQAQSAAKTPSCKDIVA 226
MAVASTKSRWETGEVQAQSAAKTPSCK +A
Sbjct: 1 MAVASTKSRWETGEVQAQSAAKTPSCKAQIA 31
>gi|169205907 PREDICTED: similar to hCG1791648 [Homo sapiens]
Length = 127
Score = 56.6 bits (135), Expect = 2e-08
Identities = 27/31 (87%), Positives = 28/31 (90%)
Query: 196 MAVASTKSRWETGEVQAQSAAKTPSCKDIVA 226
MAVASTKSRWETGEVQAQSA KTPSCK +A
Sbjct: 1 MAVASTKSRWETGEVQAQSATKTPSCKAQIA 31
>gi|157738649 neurofilament, medium polypeptide 150kDa isoform 1
[Homo sapiens]
Length = 916
Score = 54.3 bits (129), Expect = 1e-07
Identities = 62/273 (22%), Positives = 112/273 (41%), Gaps = 38/273 (13%)
Query: 1 MLLSLKPSEAPELDEDEGFGDWSQRPEQRQQHEGAQGALDSGEPPQCRSPEGEQEDRPGL 60
+ +S+K + +E E + PE ++ A+ + P+ + EGE+E+ G
Sbjct: 480 LAVSMKEEKKEAAEEKE------EEPEAEEEEVAAKKSPVKATAPEVKEEEGEKEEEEGQ 533
Query: 61 HAYEKED----SDEVHLEELSLSKEGPGPEDTVQDNLGAAGAEEEQEE---------HQK 107
E+ED SD+ EE KEG ++ + G AE E EE +K
Sbjct: 534 EEEEEEDEGAKSDQA--EEGGSEKEGSSEKEEGEQEEGETEAEAEGEEAEAKEEKKVEEK 591
Query: 108 CQQPRTPSPLVLEGTIEQSSPPLSPTTKLIDRTESLNRS-IEKSNSVKKSQPDLPISKID 166
++ T LV + +E+ SP K E +S + KS +K + +P S ++
Sbjct: 592 SEEVATKEELVADAKVEKPEKAKSPVPK--SPVEEKGKSPVPKSPVEEKGKSPVPKSPVE 649
Query: 167 QWLEQYT--QAIETAGRTP----KLARQASIELPSMAVASTKSRWETG-----EVQAQSA 215
+ + +E G++P + +A +P V KS+ E G E + +
Sbjct: 650 EKGKSPVPKSPVEEKGKSPVSKSPVEEKAKSPVPKSPVEEAKSKAEVGKGEQKEEEEKEV 709
Query: 216 AKTPSCKDIVAGDMSKKSLWEQKGGSKTSSTIK 248
+ P + + + K + E+K K S +K
Sbjct: 710 KEAPKEEKVEKKEEKPKDVPEKK---KAESPVK 739
>gi|157738641 neurofilament, medium polypeptide 150kDa isoform 2
[Homo sapiens]
Length = 540
Score = 54.3 bits (129), Expect = 1e-07
Identities = 62/273 (22%), Positives = 112/273 (41%), Gaps = 38/273 (13%)
Query: 1 MLLSLKPSEAPELDEDEGFGDWSQRPEQRQQHEGAQGALDSGEPPQCRSPEGEQEDRPGL 60
+ +S+K + +E E + PE ++ A+ + P+ + EGE+E+ G
Sbjct: 104 LAVSMKEEKKEAAEEKE------EEPEAEEEEVAAKKSPVKATAPEVKEEEGEKEEEEGQ 157
Query: 61 HAYEKED----SDEVHLEELSLSKEGPGPEDTVQDNLGAAGAEEEQEE---------HQK 107
E+ED SD+ EE KEG ++ + G AE E EE +K
Sbjct: 158 EEEEEEDEGAKSDQA--EEGGSEKEGSSEKEEGEQEEGETEAEAEGEEAEAKEEKKVEEK 215
Query: 108 CQQPRTPSPLVLEGTIEQSSPPLSPTTKLIDRTESLNRS-IEKSNSVKKSQPDLPISKID 166
++ T LV + +E+ SP K E +S + KS +K + +P S ++
Sbjct: 216 SEEVATKEELVADAKVEKPEKAKSPVPK--SPVEEKGKSPVPKSPVEEKGKSPVPKSPVE 273
Query: 167 QWLEQYT--QAIETAGRTP----KLARQASIELPSMAVASTKSRWETG-----EVQAQSA 215
+ + +E G++P + +A +P V KS+ E G E + +
Sbjct: 274 EKGKSPVPKSPVEEKGKSPVSKSPVEEKAKSPVPKSPVEEAKSKAEVGKGEQKEEEEKEV 333
Query: 216 AKTPSCKDIVAGDMSKKSLWEQKGGSKTSSTIK 248
+ P + + + K + E+K K S +K
Sbjct: 334 KEAPKEEKVEKKEEKPKDVPEKK---KAESPVK 363
>gi|78190492 retinitis pigmentosa GTPase regulator isoform C [Homo
sapiens]
Length = 1152
Score = 38.5 bits (88), Expect = 0.007
Identities = 26/99 (26%), Positives = 44/99 (44%)
Query: 12 ELDEDEGFGDWSQRPEQRQQHEGAQGALDSGEPPQCRSPEGEQEDRPGLHAYEKEDSDEV 71
E +E EG G+ + + ++ EG + + GE + EGE+E+ + + + E
Sbjct: 973 EGEEGEGEGEEEEGEGEGEEEEGEEEGEEEGEGEEEGEGEGEEEEEGEVEGEVEGEEGEG 1032
Query: 72 HLEELSLSKEGPGPEDTVQDNLGAAGAEEEQEEHQKCQQ 110
EE +EG E + EEE+EE K Q+
Sbjct: 1033 EGEEEEGEEEGEEREKEGEGEENRRNREEEEEEEGKYQE 1071
Score = 33.1 bits (74), Expect = 0.27
Identities = 28/104 (26%), Positives = 45/104 (43%), Gaps = 10/104 (9%)
Query: 12 ELDEDEGFGDWSQRPEQRQQHEGAQGALDSGEPPQCRSPEGEQEDRPGLHAYEKEDSDEV 71
E ++ EG G+ + + ++ EG + GE + EGE E+ G E+E+ +E
Sbjct: 940 EGEDGEGEGEEEEGEWEGEEEEGEGEGEEEGEG-EGEEGEGEGEEEEGEGEGEEEEGEEE 998
Query: 72 HLEELSLSKEGPGP---------EDTVQDNLGAAGAEEEQEEHQ 106
EE +EG G E V+ G EEE+ E +
Sbjct: 999 GEEEGEGEEEGEGEGEEEEEGEVEGEVEGEEGEGEGEEEEGEEE 1042
Score = 31.2 bits (69), Expect = 1.0
Identities = 24/93 (25%), Positives = 41/93 (44%), Gaps = 4/93 (4%)
Query: 12 ELDEDEGFGDWSQRPEQRQQHEGAQGALDSGEPPQCRSPEGEQEDRPGLHAYEKEDSDEV 71
E +E+EG G+ + + ++ EG + + + EGE+E G E+E+ +
Sbjct: 827 EEEEEEGEGEEEEGEGEEEEGEGEEEEGEGKGEEEGEEGEGEEEGEEGEGEGEEEEGEGE 886
Query: 72 HLEELSLSKEGPGPEDTVQDNLGAAGAEEEQEE 104
EE EG G E+ + G E +EE
Sbjct: 887 GEEE----GEGEGEEEEGEGEGEEEGEGEGEEE 915
Score = 31.2 bits (69), Expect = 1.0
Identities = 32/99 (32%), Positives = 45/99 (45%), Gaps = 12/99 (12%)
Query: 9 EAPELDEDEGFGDWSQRPEQRQQHEGAQGALDSGEPPQCRSPEGEQEDRPGLHAYEKEDS 68
E E +E+EG G+ + E + + EG +G GE + EGE E+ G E+E
Sbjct: 838 EEGEGEEEEGEGE-EEEGEGKGEEEGEEG---EGEE-EGEEGEGEGEEEEGEGEGEEEGE 892
Query: 69 DEVHLEELSLSKEGPGPED---TVQDNLGAAGAEEEQEE 104
E EE EG G E+ ++ G EEE EE
Sbjct: 893 GEGEEEE----GEGEGEEEGEGEGEEEEGEGKGEEEGEE 927
Score = 30.4 bits (67), Expect = 1.8
Identities = 34/109 (31%), Positives = 51/109 (46%), Gaps = 18/109 (16%)
Query: 6 KPSEAP-ELDEDEGFGDWSQRP-EQRQQHEGAQGALDSGEPPQCRSPEGEQEDRPGLHAY 63
+P E EL E E +W +R E+++Q E QG E Q GE+E G
Sbjct: 688 RPGEGEKELAEKE---EWKKRDGEEQEQKEREQG--HQKERNQEMEEGGEEEHGEG---- 738
Query: 64 EKEDSDEVHLEELSLSKEGPGPEDTVQDNLGAAGAEEEQEEHQKCQQPR 112
E+E+ D EE KEG G E+ + + E E+EE ++ ++ R
Sbjct: 739 EEEEGDREEEEE----KEGEGKEEGEGEEV---EGEREKEEGERKKEER 780
Score = 30.4 bits (67), Expect = 1.8
Identities = 25/94 (26%), Positives = 43/94 (45%), Gaps = 4/94 (4%)
Query: 12 ELDEDEGFGDWSQRPE-QRQQHEGAQGALDSGEPPQCRSPEGEQEDRPGLHAYEKEDSDE 70
E +E+EG G+ + E + ++ EG + GE + EGE+E+ G + + +E
Sbjct: 894 EGEEEEGEGEGEEEGEGEGEEEEGEGKGEEEGEEGE---GEGEEEEGEGEGEDGEGEGEE 950
Query: 71 VHLEELSLSKEGPGPEDTVQDNLGAAGAEEEQEE 104
E +EG G + + G G E +EE
Sbjct: 951 EEGEWEGEEEEGEGEGEEEGEGEGEEGEGEGEEE 984
Score = 29.6 bits (65), Expect = 3.0
Identities = 29/104 (27%), Positives = 42/104 (40%), Gaps = 14/104 (13%)
Query: 14 DEDEGFGDW-----SQRPEQRQQHEGAQGALDSGEPPQCRSPEGEQE--------DRPGL 60
D EG GD S E Q E +G D G R EGE+E R G
Sbjct: 649 DGPEGRGDGTCEEGSSGAEHWQDEEREKGEKDKGRGEMERPGEGEKELAEKEEWKKRDG- 707
Query: 61 HAYEKEDSDEVHLEELSLSKEGPGPEDTVQDNLGAAGAEEEQEE 104
E+++ ++ H +E + E G E+ + EEE+E+
Sbjct: 708 EEQEQKEREQGHQKERNQEMEEGGEEEHGEGEEEEGDREEEEEK 751
Score = 29.6 bits (65), Expect = 3.0
Identities = 25/99 (25%), Positives = 44/99 (44%), Gaps = 2/99 (2%)
Query: 9 EAPELDEDEGFGDWSQRPEQRQQHEGAQGALDSGEPPQCRSPEGEQEDRPGLHAYEKEDS 68
E E + D+G G+ + E R + + G ++ GE + + E E+E+ G E+ +
Sbjct: 785 EKGEEEGDQGEGE-EEETEGRGEEKEEGGEVEGGEVEEGKG-EREEEEEEGEGEEEEGEG 842
Query: 69 DEVHLEELSLSKEGPGPEDTVQDNLGAAGAEEEQEEHQK 107
+E E EG G E+ + G E E E ++
Sbjct: 843 EEEEGEGEEEEGEGKGEEEGEEGEGEEEGEEGEGEGEEE 881
Score = 29.3 bits (64), Expect = 3.9
Identities = 30/108 (27%), Positives = 46/108 (42%), Gaps = 12/108 (11%)
Query: 9 EAPELDEDEGFGDWSQRPEQRQ-QHEGAQGALDS------GEPPQCRSPEGEQEDRPGLH 61
E E +E+EG G + E+ + + EG +G + GE + EGE+E+ G
Sbjct: 845 EEGEGEEEEGEGKGEEEGEEGEGEEEGEEGEGEGEEEEGEGEGEEEGEGEGEEEEGEGEG 904
Query: 62 AYE-----KEDSDEVHLEELSLSKEGPGPEDTVQDNLGAAGAEEEQEE 104
E +E+ E EE EG G E+ + E E+EE
Sbjct: 905 EEEGEGEGEEEEGEGKGEEEGEEGEGEGEEEEGEGEGEDGEGEGEEEE 952
>gi|221307607 RANBP2-like and GRIP domain containing 3 [Homo sapiens]
Length = 1758
Score = 37.7 bits (86), Expect = 0.011
Identities = 33/106 (31%), Positives = 45/106 (42%), Gaps = 1/106 (0%)
Query: 75 ELSLSKEGPGPEDTVQDNLGAAGAEEEQEEHQKCQQPRTPSPL-VLEGTIEQSSPPLSPT 133
ELS + + D+ NL A+ EE + + P PL E T E+ LS T
Sbjct: 1603 ELSKNSDIEQSSDSKVKNLSASFPTEESSINYTFKTPEKEPPLWYAEFTKEELVQKLSST 1662
Query: 134 TKLIDRTESLNRSIEKSNSVKKSQPDLPISKIDQWLEQYTQAIETA 179
TK D L R IE +N+V Q L S+I + Q + A
Sbjct: 1663 TKSADHLNGLLREIEATNAVLMEQIKLLKSEIRRLERNQEQEVSAA 1708
>gi|4759128 solute carrier family 24 (sodium/potassium/calcium
exchanger), member 1 [Homo sapiens]
Length = 1099
Score = 37.0 bits (84), Expect = 0.019
Identities = 29/111 (26%), Positives = 46/111 (41%), Gaps = 12/111 (10%)
Query: 12 ELDEDEGFGDWSQRPEQRQQHEGAQGALDSGEPPQCRSP-------EGEQEDRPGLHAYE 64
E E G G+ ++ Q EG G+ +C + E ED +HA +
Sbjct: 759 EEGETAGEGETEEKSGGETQPEGEGETETQGKGEECEDENEAEGKGDNEGEDEGEIHAED 818
Query: 65 KE---DSDEVHLEELSLSKEGPGPEDT--VQDNLGAAGAEEEQEEHQKCQQ 110
E + E +ELS G D V+D G+ G + E+EE ++ +Q
Sbjct: 819 GEMKGNEGETESQELSAENHGEAKNDEKGVEDGGGSDGGDSEEEEEEEEEQ 869
>gi|16332372 cell division cycle 2-like 1 (PITSLRE proteins) isoform
9 [Homo sapiens]
Length = 771
Score = 37.0 bits (84), Expect = 0.019
Identities = 33/131 (25%), Positives = 59/131 (45%), Gaps = 7/131 (5%)
Query: 6 KPSEAPELDEDEGFGDWSQRPEQRQQHEGAQGALDSGEPPQCRSPEGEQEDRPGLHAYE- 64
K S A + G G S+ E+ ++ E +G+ S E + E E+E+ G ++ E
Sbjct: 264 KTSSAESSSAESGSG--SEEEEEEEEEEEEEGST-SEESEEEEEEEEEEEEETGSNSEEA 320
Query: 65 -KEDSDEVHLEELSLSKEGPGPED--TVQDNLGAAGAEEEQEEHQKCQQPRTPSPLVLEG 121
++ ++EV EE+S +E V ++ + E +E ++ + S + EG
Sbjct: 321 SEQSAEEVSEEEMSEDEERENENHLLVVPESRFDRDSGESEEAEEEVGEGTPQSSALTEG 380
Query: 122 TIEQSSPPLSP 132
SP LSP
Sbjct: 381 DYVPDSPALSP 391
Score = 28.1 bits (61), Expect = 8.8
Identities = 21/104 (20%), Positives = 48/104 (46%), Gaps = 3/104 (2%)
Query: 6 KPSEAPELDEDEGFGDWSQRPEQRQQHEGAQGA-LDSGEPPQCRSPEGEQEDRPGLHAYE 64
KP + +++E + D + ++ A+ + +SG + E E+E+ G + E
Sbjct: 239 KPVKEEKMEERDLLSDLQDISDSERKTSSAESSSAESGSGSEEEEEEEEEEEEEGSTSEE 298
Query: 65 --KEDSDEVHLEELSLSKEGPGPEDTVQDNLGAAGAEEEQEEHQ 106
+E+ +E EE + S E + ++ +E+E+ E++
Sbjct: 299 SEEEEEEEEEEEEETGSNSEEASEQSAEEVSEEEMSEDEERENE 342
>gi|16332370 cell division cycle 2-like 1 (PITSLRE proteins) isoform
8 [Homo sapiens]
Length = 780
Score = 37.0 bits (84), Expect = 0.019
Identities = 33/131 (25%), Positives = 59/131 (45%), Gaps = 7/131 (5%)
Query: 6 KPSEAPELDEDEGFGDWSQRPEQRQQHEGAQGALDSGEPPQCRSPEGEQEDRPGLHAYE- 64
K S A + G G S+ E+ ++ E +G+ S E + E E+E+ G ++ E
Sbjct: 273 KTSSAESSSAESGSG--SEEEEEEEEEEEEEGST-SEESEEEEEEEEEEEEETGSNSEEA 329
Query: 65 -KEDSDEVHLEELSLSKEGPGPED--TVQDNLGAAGAEEEQEEHQKCQQPRTPSPLVLEG 121
++ ++EV EE+S +E V ++ + E +E ++ + S + EG
Sbjct: 330 SEQSAEEVSEEEMSEDEERENENHLLVVPESRFDRDSGESEEAEEEVGEGTPQSSALTEG 389
Query: 122 TIEQSSPPLSP 132
SP LSP
Sbjct: 390 DYVPDSPALSP 400
Score = 28.1 bits (61), Expect = 8.8
Identities = 21/104 (20%), Positives = 48/104 (46%), Gaps = 3/104 (2%)
Query: 6 KPSEAPELDEDEGFGDWSQRPEQRQQHEGAQGA-LDSGEPPQCRSPEGEQEDRPGLHAYE 64
KP + +++E + D + ++ A+ + +SG + E E+E+ G + E
Sbjct: 248 KPVKEEKMEERDLLSDLQDISDSERKTSSAESSSAESGSGSEEEEEEEEEEEEEGSTSEE 307
Query: 65 --KEDSDEVHLEELSLSKEGPGPEDTVQDNLGAAGAEEEQEEHQ 106
+E+ +E EE + S E + ++ +E+E+ E++
Sbjct: 308 SEEEEEEEEEEEEETGSNSEEASEQSAEEVSEEEMSEDEERENE 351
>gi|16332364 cell division cycle 2-like 1 (PITSLRE proteins) isoform
5 [Homo sapiens]
Length = 748
Score = 37.0 bits (84), Expect = 0.019
Identities = 33/131 (25%), Positives = 59/131 (45%), Gaps = 7/131 (5%)
Query: 6 KPSEAPELDEDEGFGDWSQRPEQRQQHEGAQGALDSGEPPQCRSPEGEQEDRPGLHAYE- 64
K S A + G G S+ E+ ++ E +G+ S E + E E+E+ G ++ E
Sbjct: 241 KTSSAESSSAESGSG--SEEEEEEEEEEEEEGST-SEESEEEEEEEEEEEEETGSNSEEA 297
Query: 65 -KEDSDEVHLEELSLSKEGPGPED--TVQDNLGAAGAEEEQEEHQKCQQPRTPSPLVLEG 121
++ ++EV EE+S +E V ++ + E +E ++ + S + EG
Sbjct: 298 SEQSAEEVSEEEMSEDEERENENHLLVVPESRFDRDSGESEEAEEEVGEGTPQSSALTEG 357
Query: 122 TIEQSSPPLSP 132
SP LSP
Sbjct: 358 DYVPDSPALSP 368
Score = 28.1 bits (61), Expect = 8.8
Identities = 21/104 (20%), Positives = 48/104 (46%), Gaps = 3/104 (2%)
Query: 6 KPSEAPELDEDEGFGDWSQRPEQRQQHEGAQGA-LDSGEPPQCRSPEGEQEDRPGLHAYE 64
KP + +++E + D + ++ A+ + +SG + E E+E+ G + E
Sbjct: 216 KPVKEEKMEERDLLSDLQDISDSERKTSSAESSSAESGSGSEEEEEEEEEEEEEGSTSEE 275
Query: 65 --KEDSDEVHLEELSLSKEGPGPEDTVQDNLGAAGAEEEQEEHQ 106
+E+ +E EE + S E + ++ +E+E+ E++
Sbjct: 276 SEEEEEEEEEEEEETGSNSEEASEQSAEEVSEEEMSEDEERENE 319
>gi|16332362 cell division cycle 2-like 1 (PITSLRE proteins) isoform
4 [Homo sapiens]
Length = 737
Score = 37.0 bits (84), Expect = 0.019
Identities = 33/131 (25%), Positives = 59/131 (45%), Gaps = 7/131 (5%)
Query: 6 KPSEAPELDEDEGFGDWSQRPEQRQQHEGAQGALDSGEPPQCRSPEGEQEDRPGLHAYE- 64
K S A + G G S+ E+ ++ E +G+ S E + E E+E+ G ++ E
Sbjct: 230 KTSSAESSSAESGSG--SEEEEEEEEEEEEEGST-SEESEEEEEEEEEEEEETGSNSEEA 286
Query: 65 -KEDSDEVHLEELSLSKEGPGPED--TVQDNLGAAGAEEEQEEHQKCQQPRTPSPLVLEG 121
++ ++EV EE+S +E V ++ + E +E ++ + S + EG
Sbjct: 287 SEQSAEEVSEEEMSEDEERENENHLLVVPESRFDRDSGESEEAEEEVGEGTPQSSALTEG 346
Query: 122 TIEQSSPPLSP 132
SP LSP
Sbjct: 347 DYVPDSPALSP 357
Score = 28.1 bits (61), Expect = 8.8
Identities = 21/104 (20%), Positives = 48/104 (46%), Gaps = 3/104 (2%)
Query: 6 KPSEAPELDEDEGFGDWSQRPEQRQQHEGAQGA-LDSGEPPQCRSPEGEQEDRPGLHAYE 64
KP + +++E + D + ++ A+ + +SG + E E+E+ G + E
Sbjct: 205 KPVKEEKMEERDLLSDLQDISDSERKTSSAESSSAESGSGSEEEEEEEEEEEEEGSTSEE 264
Query: 65 --KEDSDEVHLEELSLSKEGPGPEDTVQDNLGAAGAEEEQEEHQ 106
+E+ +E EE + S E + ++ +E+E+ E++
Sbjct: 265 SEEEEEEEEEEEEETGSNSEEASEQSAEEVSEEEMSEDEERENE 308
>gi|16332360 cell division cycle 2-like 1 (PITSLRE proteins) isoform
3 [Homo sapiens]
Length = 526
Score = 37.0 bits (84), Expect = 0.019
Identities = 33/131 (25%), Positives = 59/131 (45%), Gaps = 7/131 (5%)
Query: 6 KPSEAPELDEDEGFGDWSQRPEQRQQHEGAQGALDSGEPPQCRSPEGEQEDRPGLHAYE- 64
K S A + G G S+ E+ ++ E +G+ S E + E E+E+ G ++ E
Sbjct: 19 KTSSAESSSAESGSG--SEEEEEEEEEEEEEGST-SEESEEEEEEEEEEEEETGSNSEEA 75
Query: 65 -KEDSDEVHLEELSLSKEGPGPED--TVQDNLGAAGAEEEQEEHQKCQQPRTPSPLVLEG 121
++ ++EV EE+S +E V ++ + E +E ++ + S + EG
Sbjct: 76 SEQSAEEVSEEEMSEDEERENENHLLVVPESRFDRDSGESEEAEEEVGEGTPQSSALTEG 135
Query: 122 TIEQSSPPLSP 132
SP LSP
Sbjct: 136 DYVPDSPALSP 146
Score = 29.3 bits (64), Expect = 3.9
Identities = 36/196 (18%), Positives = 74/196 (37%), Gaps = 5/196 (2%)
Query: 28 QRQQHEGAQGALDSGEPPQCRSPEGEQEDRPGLHAYEKEDSDEVHLEELSLSKEGPGPED 87
+R+ + +SG + E E+E+ G + E E+ +E EE + G E+
Sbjct: 17 ERKTSSAESSSAESGSGSEEEEEEEEEEEEEGSTSEESEEEEEE--EEEEEEETGSNSEE 74
Query: 88 TVQDNLGAAGAEEEQEEHQKCQQPRTPSPLVLEGTIEQSSPPLSPTTKLIDRTESLNRSI 147
+ + EE E+ ++ + +V E ++ S + + + ++
Sbjct: 75 ASEQSAEEVSEEEMSEDEER--ENENHLLVVPESRFDRDSGESEEAEEEVGEGTPQSSAL 132
Query: 148 EKSNSVKKSQPDLPISKIDQWLEQYTQAIETAGRTPKLARQASIELPSMAVASTKSRWET 207
+ + V S P L ++ Q L +Y A++ + IE + V +T
Sbjct: 133 TEGDYVPDS-PALSPIELKQELPKYLPALQGCRSVEEFQCLNRIEEGTYGVVYRAKDKKT 191
Query: 208 GEVQAQSAAKTPSCKD 223
E+ A K K+
Sbjct: 192 DEIVALKRLKMEKEKE 207
>gi|16332358 cell division cycle 2-like 1 (PITSLRE proteins) isoform
2 [Homo sapiens]
Length = 782
Score = 37.0 bits (84), Expect = 0.019
Identities = 33/131 (25%), Positives = 59/131 (45%), Gaps = 7/131 (5%)
Query: 6 KPSEAPELDEDEGFGDWSQRPEQRQQHEGAQGALDSGEPPQCRSPEGEQEDRPGLHAYE- 64
K S A + G G S+ E+ ++ E +G+ S E + E E+E+ G ++ E
Sbjct: 275 KTSSAESSSAESGSG--SEEEEEEEEEEEEEGST-SEESEEEEEEEEEEEEETGSNSEEA 331
Query: 65 -KEDSDEVHLEELSLSKEGPGPED--TVQDNLGAAGAEEEQEEHQKCQQPRTPSPLVLEG 121
++ ++EV EE+S +E V ++ + E +E ++ + S + EG
Sbjct: 332 SEQSAEEVSEEEMSEDEERENENHLLVVPESRFDRDSGESEEAEEEVGEGTPQSSALTEG 391
Query: 122 TIEQSSPPLSP 132
SP LSP
Sbjct: 392 DYVPDSPALSP 402
Score = 28.1 bits (61), Expect = 8.8
Identities = 21/104 (20%), Positives = 48/104 (46%), Gaps = 3/104 (2%)
Query: 6 KPSEAPELDEDEGFGDWSQRPEQRQQHEGAQGA-LDSGEPPQCRSPEGEQEDRPGLHAYE 64
KP + +++E + D + ++ A+ + +SG + E E+E+ G + E
Sbjct: 250 KPVKEEKMEERDLLSDLQDISDSERKTSSAESSSAESGSGSEEEEEEEEEEEEEGSTSEE 309
Query: 65 --KEDSDEVHLEELSLSKEGPGPEDTVQDNLGAAGAEEEQEEHQ 106
+E+ +E EE + S E + ++ +E+E+ E++
Sbjct: 310 SEEEEEEEEEEEEETGSNSEEASEQSAEEVSEEEMSEDEERENE 353
>gi|92087055 PERQ amino acid rich, with GYF domain 1 [Homo sapiens]
Length = 1035
Score = 36.6 bits (83), Expect = 0.025
Identities = 25/84 (29%), Positives = 39/84 (46%), Gaps = 7/84 (8%)
Query: 33 EGAQGALDSGEPPQCRSPEGEQEDRPGLHAYEKEDSDEVHLEELSLS------KEGPGPE 86
E +G S +CR+PEG +ED+ GL + +D DE + S K+GP
Sbjct: 264 EEGRGGGGSSHLRRCRAPEGFEEDKDGLPEWCLDDEDE-EMGTFDASGAFLPLKKGPKEP 322
Query: 87 DTVQDNLGAAGAEEEQEEHQKCQQ 110
+ L G EEE+E + ++
Sbjct: 323 IPEEQELDFQGLEEEEEPSEGLEE 346
>gi|56549694 enabled homolog isoform a [Homo sapiens]
Length = 591
Score = 36.2 bits (82), Expect = 0.032
Identities = 36/167 (21%), Positives = 69/167 (41%), Gaps = 11/167 (6%)
Query: 64 EKEDSDEVHLEELSLSKEGPGPEDTVQDNLGAAGAEEEQEEHQKCQQPRTPSPLVLEGTI 123
E+E + +E L +E E ++ L E E++E ++ ++ L + +
Sbjct: 157 ERERLERERMERERLERERLERERLERERLEQEQLERERQERERQERLERQERLERQERL 216
Query: 124 EQSSPPLSPTTKLIDRTESLNRSIEKSNSVKKSQPDLPISKIDQWLEQYTQAIETAGRTP 183
E+ + +DR + E+ +++ + + + + LE+ E R
Sbjct: 217 ERQ--------ERLDRERQERQERERLERLERERQE---RERQEQLEREQLEWERERRIS 265
Query: 184 KLARQASIELPSMAVASTKSRWETGEVQAQSAAKTPSCKDIVAGDMS 230
A AS+E P +V S E G A A+TPS + IV G ++
Sbjct: 266 SAAAPASVETPLNSVLGDSSASEPGLQAASQPAETPSQQGIVLGPLA 312
>gi|39930375 enabled homolog isoform b [Homo sapiens]
Length = 570
Score = 36.2 bits (82), Expect = 0.032
Identities = 36/167 (21%), Positives = 69/167 (41%), Gaps = 11/167 (6%)
Query: 64 EKEDSDEVHLEELSLSKEGPGPEDTVQDNLGAAGAEEEQEEHQKCQQPRTPSPLVLEGTI 123
E+E + +E L +E E ++ L E E++E ++ ++ L + +
Sbjct: 157 ERERLERERMERERLERERLERERLERERLEQEQLERERQERERQERLERQERLERQERL 216
Query: 124 EQSSPPLSPTTKLIDRTESLNRSIEKSNSVKKSQPDLPISKIDQWLEQYTQAIETAGRTP 183
E+ + +DR + E+ +++ + + + + LE+ E R
Sbjct: 217 ERQ--------ERLDRERQERQERERLERLERERQE---RERQEQLEREQLEWERERRIS 265
Query: 184 KLARQASIELPSMAVASTKSRWETGEVQAQSAAKTPSCKDIVAGDMS 230
A AS+E P +V S E G A A+TPS + IV G ++
Sbjct: 266 SAAAPASVETPLNSVLGDSSASEPGLQAASQPAETPSQQGIVLGPLA 312
>gi|24431975 hypothetical protein LOC26148 [Homo sapiens]
Length = 1247
Score = 35.8 bits (81), Expect = 0.042
Identities = 55/226 (24%), Positives = 83/226 (36%), Gaps = 35/226 (15%)
Query: 60 LHAYEKEDSDEVHLEELSLSKEGPGPEDTVQDNLGAAGAEEEQEEHQKCQQPRTPSPLVL 119
L A +E+ D+V E+ S GP ED++++ +E++ H P TP+ +
Sbjct: 947 LWAKFRENPDQVEPEDGSDVSPGPNSEDSIEE------VKEDRNSHPPANLP-TPASTRI 999
Query: 120 EGTIEQSSPPLSPTTKLI--DRTESLNRSIEKSNSVKKSQPDLPISKIDQWLEQYTQAI- 176
L +LI ++ E + +S +KS P+ L+
Sbjct: 1000 LRKYSNIRGKLRAQQRLIKNEKMECPDALAVESKPSRKSVCINPLMSPKLALQVDADGFP 1059
Query: 177 ----ETAGRTPKLARQASIELPSMAVASTKSRWE----------------TGEVQAQSAA 216
T G + +Q S LP V S + R E + E A A
Sbjct: 1060 VKPKSTEGMKGRKGKQVSEILPKAEVQSKRKRTEGSSPPDSKNKGPTVKASKEKHADGAT 1119
Query: 217 KTPSCKDIVAGDMS-----KKSLWEQKGGSKTSSTIKSTPSGKRYK 257
KTP+ K A D S K SL E K S KS P ++ K
Sbjct: 1120 KTPAAKRPAARDRSSQPPKKTSLKENKVKIPKKSAGKSCPPSRKEK 1165
>gi|21735415 centromere protein B [Homo sapiens]
Length = 599
Score = 35.4 bits (80), Expect = 0.055
Identities = 31/101 (30%), Positives = 46/101 (45%), Gaps = 20/101 (19%)
Query: 9 EAPELDEDEGFGDWSQRPEQRQQHEGAQGALDSGEPPQCRSPEGEQEDRPGLHAYEKEDS 68
E E +E+EG G+ + + ++ EG +G + GE E E E+ + DS
Sbjct: 411 EEEEEEEEEGEGEEEEEEGEEEEEEGGEGE-ELGE-------EEEVEEEGDV------DS 456
Query: 69 DEVHLEELSLSKEGPGPEDTVQ------DNLGAAGAEEEQE 103
DE E+ S EG ED Q + GA GA+EE +
Sbjct: 457 DEEEEEDEESSSEGLEAEDWAQGVVEAGGSFGAYGAQEEAQ 497
Score = 28.9 bits (63), Expect = 5.2
Identities = 26/121 (21%), Positives = 50/121 (41%), Gaps = 12/121 (9%)
Query: 4 SLKPSEAPELDEDEGFGDWSQRPEQRQQHEGAQGALDSGEPPQCRSPEGEQEDRPGLHAY 63
+++PS+ + GFG + + E + EGE+E+ G
Sbjct: 374 AVEPSDIAACFREAGFGGGPNATITTSLKSEGEEEEEEEEEEEEEEGEGEEEEEEG---- 429
Query: 64 EKEDSDEVHLEELSLSKEGPGPEDTVQDNLGAAGAEEEQEEHQKCQQPRTPSPLVLEGTI 123
E+E+ + EEL G E+ V++ G ++EE+EE ++ + +G +
Sbjct: 430 EEEEEEGGEGEEL-------GEEEEVEEE-GDVDSDEEEEEDEESSSEGLEAEDWAQGVV 481
Query: 124 E 124
E
Sbjct: 482 E 482
>gi|47578107 delangin isoform B [Homo sapiens]
Length = 2697
Score = 35.4 bits (80), Expect = 0.055
Identities = 54/256 (21%), Positives = 92/256 (35%), Gaps = 13/256 (5%)
Query: 1 MLLSLKPSEAPELDEDEGF---GDWSQRPEQ-RQQHEGAQGALDSGEPPQCRSPEGEQED 56
+++S+ +A +D D ++PE+ +Q ++ L +S +
Sbjct: 539 LMVSIDLHQAGRVDSQASITQDSDSIKKPEEIKQCNDAPVSVLQEDIVGSLKSTPENHPE 598
Query: 57 RPGLHAYEKEDSDEVHLEELSLSKEGPGPEDTVQDNLGAAGAE---EEQEEHQKCQQPRT 113
P + + E+ E L++ P V+ E E Q E K + RT
Sbjct: 599 TPKKKSDPELSKSEMKQSESRLAESKPNENRLVETKSSENKLETKVETQTEELKQNESRT 658
Query: 114 PSPLVLEGTIEQSSPPLSPTTKLIDRTESLNRSIEKSNSVKKSQPDLPISKIDQWLEQYT 173
E TI + P +L D + N+ + KS+P+ P K + E
Sbjct: 659 TECKQNESTIVE---PKQNENRLSDTKPNDNKQNNGRSETTKSRPETPKQKGESRPETPK 715
Query: 174 QAIETAGRTPKLARQASIELPSMAVASTKSRWETGEVQAQSAAKTPSCKDIVAGDMSKKS 233
Q + TPK E P +SR ET + + + +TP + D K S
Sbjct: 716 QKSDGHPETPKQKGDGRPETPKQ---KGESRPETPKQKNEGRPETPKHRHDNRRDSGKPS 772
Query: 234 LWEQKGGSKTSSTIKS 249
++ SK KS
Sbjct: 773 TEKKPEVSKHKQDTKS 788
>gi|47578105 delangin isoform A [Homo sapiens]
Length = 2804
Score = 35.4 bits (80), Expect = 0.055
Identities = 54/256 (21%), Positives = 92/256 (35%), Gaps = 13/256 (5%)
Query: 1 MLLSLKPSEAPELDEDEGF---GDWSQRPEQ-RQQHEGAQGALDSGEPPQCRSPEGEQED 56
+++S+ +A +D D ++PE+ +Q ++ L +S +
Sbjct: 539 LMVSIDLHQAGRVDSQASITQDSDSIKKPEEIKQCNDAPVSVLQEDIVGSLKSTPENHPE 598
Query: 57 RPGLHAYEKEDSDEVHLEELSLSKEGPGPEDTVQDNLGAAGAE---EEQEEHQKCQQPRT 113
P + + E+ E L++ P V+ E E Q E K + RT
Sbjct: 599 TPKKKSDPELSKSEMKQSESRLAESKPNENRLVETKSSENKLETKVETQTEELKQNESRT 658
Query: 114 PSPLVLEGTIEQSSPPLSPTTKLIDRTESLNRSIEKSNSVKKSQPDLPISKIDQWLEQYT 173
E TI + P +L D + N+ + KS+P+ P K + E
Sbjct: 659 TECKQNESTIVE---PKQNENRLSDTKPNDNKQNNGRSETTKSRPETPKQKGESRPETPK 715
Query: 174 QAIETAGRTPKLARQASIELPSMAVASTKSRWETGEVQAQSAAKTPSCKDIVAGDMSKKS 233
Q + TPK E P +SR ET + + + +TP + D K S
Sbjct: 716 QKSDGHPETPKQKGDGRPETPKQ---KGESRPETPKQKNEGRPETPKHRHDNRRDSGKPS 772
Query: 234 LWEQKGGSKTSSTIKS 249
++ SK KS
Sbjct: 773 TEKKPEVSKHKQDTKS 788
Database: hs.faa
Posted date: Aug 4, 2009 4:42 PM
Number of letters in database: 18,247,518
Number of sequences in database: 37,866
Lambda K H
0.304 0.124 0.351
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 13,110,813
Number of Sequences: 37866
Number of extensions: 705453
Number of successful extensions: 2897
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 49
Number of HSP's successfully gapped in prelim test: 286
Number of HSP's that attempted gapping in prelim test: 2514
Number of HSP's gapped (non-prelim): 591
length of query: 277
length of database: 18,247,518
effective HSP length: 101
effective length of query: 176
effective length of database: 14,423,052
effective search space: 2538457152
effective search space used: 2538457152
T: 11
A: 40
X1: 16 ( 7.0 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 43 (21.8 bits)
S2: 61 (28.1 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.